Nitrate in the active site of protein tyrosine phosphatase 1B is a putative mimetic of the transition state.

Kenny PW, Newman J, Peat TS
Acta Crystallogr D Biol Crystallogr. 2014 70 (Pt 2): 565-71

PMID: 24531490 · DOI:10.1107/S1399004713031052

The X-ray crystal structure of the complex of protein tyrosine phosphatase 1B with nitrate anion has been determined and modelled quantum-mechanically. Two protomers were present in the structure, one with the mechanistically important WPD loop closed and the other with this loop open. Nitrate was observed bound to each protomer, making close contacts with the S atom of the catalytic cysteine and a tyrosine residue from a crystallographically related protomer.

MeSH Terms (16)

Biocatalysis Catalytic Domain Crystallography, X-Ray Escherichia coli Humans Ligands Models, Molecular Molecular Mimicry Nitrates Promoter Regions, Genetic Protein Structure, Secondary Protein Structure, Tertiary Protein Tyrosine Phosphatase, Non-Receptor Type 1 Quantum Theory Recombinant Proteins Substrate Specificity

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