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The publication data currently available has been vetted by Vanderbilt faculty, staff, administrators and trainees. The data itself is retrieved directly from NCBI's PubMed and is automatically updated on a weekly basis to ensure accuracy and completeness.

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Results: 31 to 40 of 202

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Genotype tunes pancreatic ductal adenocarcinoma tissue tension to induce matricellular fibrosis and tumor progression.
Laklai H, Miroshnikova YA, Pickup MW, Collisson EA, Kim GE, Barrett AS, Hill RC, Lakins JN, Schlaepfer DD, Mouw JK, LeBleu VS, Roy N, Novitskiy SV, Johansen JS, Poli V, Kalluri R, Iacobuzio-Donahue CA, Wood LD, Hebrok M, Hansen K, Moses HL, Weaver VM
(2016) Nat Med 22: 497-505
MeSH Terms: Animals, Carcinoma, Pancreatic Ductal, Chromatography, Liquid, Collagen, Disease Models, Animal, Disease Progression, Extracellular Matrix, Fibrosis, Genotype, Humans, Integrin beta Chains, Mice, Microscopy, Atomic Force, Mutation, Pancreatic Neoplasms, Prognosis, Proteomics, Proto-Oncogene Proteins p21(ras), Real-Time Polymerase Chain Reaction, STAT3 Transcription Factor, Signal Transduction, Smad4 Protein, Survival Rate, Tandem Mass Spectrometry, Transforming Growth Factor beta, Tumor Microenvironment
Added May 5, 2017
1 Communities
1 Members
0 Resources
26 MeSH Terms
Systematic evaluation of data-independent acquisition for sensitive and reproducible proteomics-a prototype design for a single injection assay.
Heaven MR, Funk AJ, Cobbs AL, Haffey WD, Norris JL, McCullumsmith RE, Greis KD
(2016) J Mass Spectrom 51: 1-11
MeSH Terms: Chromatography, Liquid, Escherichia coli, Escherichia coli Proteins, Flow Injection Analysis, Peptides, Proteome, Proteomics, Reproducibility of Results, Software, Tandem Mass Spectrometry
Added August 17, 2016
0 Communities
1 Members
0 Resources
10 MeSH Terms
MID Max: LC-MS/MS Method for Measuring the Precursor and Product Mass Isotopomer Distributions of Metabolic Intermediates and Cofactors for Metabolic Flux Analysis Applications.
McCloskey D, Young JD, Xu S, Palsson BO, Feist AM
(2016) Anal Chem 88: 1362-70
MeSH Terms: Adenosine Triphosphate, Carbohydrate Metabolism, Chromatography, High Pressure Liquid, Escherichia coli, Isotope Labeling, Metabolic Flux Analysis, Molecular Structure, Tandem Mass Spectrometry
Added March 31, 2016
0 Communities
1 Members
0 Resources
8 MeSH Terms
Reproducibility of Differential Proteomic Technologies in CPTAC Fractionated Xenografts.
Tabb DL, Wang X, Carr SA, Clauser KR, Mertins P, Chambers MC, Holman JD, Wang J, Zhang B, Zimmerman LJ, Chen X, Gunawardena HP, Davies SR, Ellis MJ, Li S, Townsend RR, Boja ES, Ketchum KA, Kinsinger CR, Mesri M, Rodriguez H, Liu T, Kim S, McDermott JE, Payne SH, Petyuk VA, Rodland KD, Smith RD, Yang F, Chan DW, Zhang B, Zhang H, Zhang Z, Zhou JY, Liebler DC
(2016) J Proteome Res 15: 691-706
MeSH Terms: Breast Neoplasms, Chromatography, Liquid, Data Interpretation, Statistical, Female, Gene Expression Profiling, Heterografts, Humans, Metabolic Networks and Pathways, Observer Variation, Proteome, Proteomics, Quality Control, Reproducibility of Results, Tandem Mass Spectrometry
Added February 15, 2016
0 Communities
1 Members
0 Resources
14 MeSH Terms
Backbone Flexibility Influences Nucleotide Incorporation by Human Translesion DNA Polymerase η opposite Intrastrand Cross-Linked DNA.
O'Flaherty DK, Guengerich FP, Egli M, Wilds CJ
(2015) Biochemistry 54: 7449-56
MeSH Terms: Chromatography, Liquid, DNA, DNA Damage, DNA-Directed DNA Polymerase, Humans, Kinetics, Tandem Mass Spectrometry
Added March 14, 2018
0 Communities
1 Members
0 Resources
7 MeSH Terms
Comprehensive Characterization of Glycosylation and Hydroxylation of Basement Membrane Collagen IV by High-Resolution Mass Spectrometry.
Basak T, Vega-Montoto L, Zimmerman LJ, Tabb DL, Hudson BG, Vanacore RM
(2016) J Proteome Res 15: 245-58
MeSH Terms: Amino Acid Sequence, Animals, Basement Membrane, Cell Line, Chromatography, Reverse-Phase, Collagen Type IV, Glycosylation, Humans, Hydroxylation, Lens Capsule, Crystalline, Mice, Molecular Sequence Data, Protein Processing, Post-Translational, Tandem Mass Spectrometry
Added December 3, 2015
1 Communities
3 Members
1 Resources
14 MeSH Terms
MALDI Imaging Mass Spectrometry Spatially Maps Age-Related Deamidation and Truncation of Human Lens Aquaporin-0.
Wenke JL, Rose KL, Spraggins JM, Schey KL
(2015) Invest Ophthalmol Vis Sci 56: 7398-405
MeSH Terms: Adult, Aging, Aquaporins, Cataract, Eye Proteins, Female, Fourier Analysis, Humans, Lens, Crystalline, Male, Middle Aged, Protein Processing, Post-Translational, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization, Tandem Mass Spectrometry, Young Adult
Added February 15, 2016
0 Communities
2 Members
0 Resources
15 MeSH Terms
Proteomic Analysis of Macular Fluid Associated With Advanced Glaucomatous Excavation.
Patel S, Ling J, Kim SJ, Schey KL, Rose K, Kuchtey RW
(2016) JAMA Ophthalmol 134: 108-10
MeSH Terms: Chromatography, High Pressure Liquid, Diathermy, Endotamponade, Eye Proteins, Fluorescein Angiography, Humans, Low Tension Glaucoma, Proteomics, Retinoschisis, Subretinal Fluid, Tandem Mass Spectrometry, Tomography, Optical Coherence, Vitrectomy, Vitreous Body
Added February 15, 2016
0 Communities
1 Members
0 Resources
14 MeSH Terms
Decellularization of intact tissue enables MALDI imaging mass spectrometry analysis of the extracellular matrix.
Gessel M, Spraggins JM, Voziyan P, Hudson BG, Caprioli RM
(2015) J Mass Spectrom 50: 1288-93
MeSH Terms: Amino Acid Sequence, Animals, Collagen, Extracellular Matrix, Extracellular Matrix Proteins, Freezing, Humans, Hydrolysis, Image Processing, Computer-Assisted, Mice, Molecular Sequence Data, Peptide Fragments, Rats, Sodium Dodecyl Sulfate, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization, Tandem Mass Spectrometry
Added November 3, 2015
1 Communities
4 Members
1 Resources
16 MeSH Terms
Integrating mRNA and Protein Sequencing Enables the Detection and Quantitative Profiling of Natural Protein Sequence Variants of Populus trichocarpa.
Abraham PE, Wang X, Ranjan P, Nookaew I, Zhang B, Tuskan GA, Hettich RL
(2015) J Proteome Res 14: 5318-26
MeSH Terms: Amino Acid Sequence, Amino Acid Substitution, Databases, Protein, Diploidy, Genetic Variation, Molecular Sequence Data, Plant Proteins, Populus, Proteomics, RNA, Messenger, RNA, Plant, Sequence Analysis, Protein, Sequence Analysis, RNA, Sequence Homology, Amino Acid, Tandem Mass Spectrometry
Added February 15, 2016
0 Communities
1 Members
0 Resources
15 MeSH Terms