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The publication data currently available has been vetted by Vanderbilt faculty, staff, administrators and trainees. The data itself is retrieved directly from NCBI's PubMed and is automatically updated on a weekly basis to ensure accuracy and completeness.

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Results: 11 to 20 of 809

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Integrative Protein Modeling in RosettaNMR from Sparse Paramagnetic Restraints.
Kuenze G, Bonneau R, Leman JK, Meiler J
(2019) Structure 27: 1721-1734.e5
MeSH Terms: Animals, Humans, Molecular Docking Simulation, Molecular Dynamics Simulation, Nuclear Magnetic Resonance, Biomolecular, Protein Conformation, Software
Added March 21, 2020
0 Communities
1 Members
0 Resources
7 MeSH Terms
Upgraded molecular models of the human KCNQ1 potassium channel.
Kuenze G, Duran AM, Woods H, Brewer KR, McDonald EF, Vanoye CG, George AL, Sanders CR, Meiler J
(2019) PLoS One 14: e0220415
MeSH Terms: Humans, Hydrogen Bonding, KCNQ1 Potassium Channel, Lipids, Loss of Function Mutation, Models, Molecular, Molecular Docking Simulation, Molecular Dynamics Simulation, Protein Binding, Protein Conformation, Structure-Activity Relationship
Added March 21, 2020
0 Communities
1 Members
0 Resources
MeSH Terms
Protein multi-functionality: introduction.
Gurevich VV
(2019) Cell Mol Life Sci 76: 4405-4406
MeSH Terms: Humans, Intrinsically Disordered Proteins, Protein Binding, Protein Conformation, Signal Transduction
Added March 18, 2020
0 Communities
1 Members
0 Resources
MeSH Terms
Protein structure prediction using sparse NOE and RDC restraints with Rosetta in CASP13.
Kuenze G, Meiler J
(2019) Proteins 87: 1341-1350
MeSH Terms: Computational Biology, Magnetic Resonance Spectroscopy, Models, Molecular, Protein Conformation, Protein Folding, Proteins, Software
Added March 21, 2020
0 Communities
1 Members
0 Resources
7 MeSH Terms
A unified structural model of the mammalian translocator protein (TSPO).
Xia Y, Ledwitch K, Kuenze G, Duran A, Li J, Sanders CR, Manning C, Meiler J
(2019) J Biomol NMR 73: 347-364
MeSH Terms: Animals, Bacterial Proteins, Ligands, Mammals, Mice, Mitochondrial Membrane Transport Proteins, Mitochondrial Permeability Transition Pore, Models, Molecular, Molecular Imaging, Nuclear Magnetic Resonance, Biomolecular, Protein Binding, Protein Conformation, Receptors, GABA
Added March 21, 2020
0 Communities
1 Members
0 Resources
13 MeSH Terms
Protection of abasic sites during DNA replication by a stable thiazolidine protein-DNA cross-link.
Thompson PS, Amidon KM, Mohni KN, Cortez D, Eichman BF
(2019) Nat Struct Mol Biol 26: 613-618
MeSH Terms: Crystallography, X-Ray, DNA Repair, DNA Replication, DNA, Single-Stranded, DNA-Binding Proteins, Escherichia coli, Escherichia coli Proteins, Humans, Molecular Docking Simulation, Protein Conformation, Thiazolidines
Added August 26, 2019
0 Communities
1 Members
0 Resources
11 MeSH Terms
Human cytochrome P450 enzymes bind drugs and other substrates mainly through conformational-selection modes.
Guengerich FP, Wilkey CJ, Phan TTN
(2019) J Biol Chem 294: 10928-10941
MeSH Terms: Catalysis, Cytochrome P-450 CYP2D6, Cytochrome P-450 CYP2E1, Cytochrome P-450 CYP3A, Cytochrome P-450 Enzyme Inhibitors, Cytochrome P-450 Enzyme System, Humans, Kinetics, Lauric Acids, Ligands, Molecular Conformation, Oxidation-Reduction, Palmitic Acid, Protein Binding, Protein Conformation, Spiro Compounds, Substrate Specificity
Added March 3, 2020
0 Communities
1 Members
0 Resources
17 MeSH Terms
Conformational selection dominates binding of steroids to human cytochrome P450 17A1.
Guengerich FP, Wilkey CJ, Glass SM, Reddish MJ
(2019) J Biol Chem 294: 10028-10041
MeSH Terms: 17-alpha-Hydroxypregnenolone, 17-alpha-Hydroxyprogesterone, Androstenes, Humans, Kinetics, Protein Conformation, Steroid 17-alpha-Hydroxylase, Substrate Specificity
Added March 3, 2020
0 Communities
1 Members
0 Resources
MeSH Terms
Cryo-EM Analysis Reveals Structural Basis of Helicobacter pylori VacA Toxin Oligomerization.
Su M, Erwin AL, Campbell AM, Pyburn TM, Salay LE, Hanks JL, Lacy DB, Akey DL, Cover TL, Ohi MD
(2019) J Mol Biol 431: 1956-1965
MeSH Terms: Bacterial Proteins, Cryoelectron Microscopy, Helicobacter Infections, Helicobacter pylori, Humans, Models, Molecular, Protein Conformation, Protein Multimerization
Added April 11, 2019
0 Communities
3 Members
0 Resources
8 MeSH Terms
Critical role of the finger loop in arrestin binding to the receptors.
Zheng C, Tholen J, Gurevich VV
(2019) PLoS One 14: e0213792
MeSH Terms: Amino Acid Sequence, Arrestins, HEK293 Cells, Humans, Point Mutation, Protein Conformation, Receptor, Muscarinic M2, Receptors, Adrenergic, beta-2, Receptors, Dopamine D1, Receptors, Dopamine D2, Sequence Homology
Added March 18, 2020
0 Communities
1 Members
0 Resources
MeSH Terms