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The publication data currently available has been vetted by Vanderbilt faculty, staff, administrators and trainees. The data itself is retrieved directly from NCBI's PubMed and is automatically updated on a weekly basis to ensure accuracy and completeness.

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Results: 11 to 20 of 74

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Few residues within an extensive binding interface drive receptor interaction and determine the specificity of arrestin proteins.
Vishnivetskiy SA, Gimenez LE, Francis DJ, Hanson SM, Hubbell WL, Klug CS, Gurevich VV
(2011) J Biol Chem 286: 24288-99
MeSH Terms: Amino Acid Substitution, Animals, Arrestin, Binding Sites, Cattle, Humans, Mutation, Missense, Peptide Mapping, Protein Structure, Tertiary, Receptors, G-Protein-Coupled
Added December 10, 2013
0 Communities
1 Members
0 Resources
10 MeSH Terms
Proteomic profiling of mucosal and submucosal colonic tissues yields protein signatures that differentiate the inflammatory colitides.
M'Koma AE, Seeley EH, Washington MK, Schwartz DA, Muldoon RL, Herline AJ, Wise PE, Caprioli RM
(2011) Inflamm Bowel Dis 17: 875-83
MeSH Terms: Biomarkers, Colitis, Ulcerative, Crohn Disease, Discriminant Analysis, Humans, Mucous Membrane, Peptide Mapping, Proteome, Proteomics, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
Added April 12, 2016
0 Communities
2 Members
0 Resources
10 MeSH Terms
Mapping the N-terminal residues of Epstein-Barr virus gp42 that bind gH/gL by using fluorescence polarization and cell-based fusion assays.
Liu F, Marquardt G, Kirschner AN, Longnecker R, Jardetzky TS
(2010) J Virol 84: 10375-85
MeSH Terms: Amino Acid Sequence, Animals, Binding Sites, CHO Cells, Cell Line, Cricetinae, Cricetulus, Fluorescence Polarization, Herpesvirus 4, Human, Humans, Membrane Fusion, Molecular Sequence Data, Mutagenesis, Site-Directed, Peptide Mapping, Protein Binding, Recombinant Proteins, Viral Proteins, Virus Internalization
Added April 12, 2015
0 Communities
1 Members
0 Resources
18 MeSH Terms
TagRecon: high-throughput mutation identification through sequence tagging.
Dasari S, Chambers MC, Slebos RJ, Zimmerman LJ, Ham AJ, Tabb DL
(2010) J Proteome Res 9: 1716-26
MeSH Terms: Algorithms, Cell Line, Tumor, Chromatography, Liquid, Colonic Neoplasms, Computational Biology, DNA Mismatch Repair, Data Mining, Databases, Protein, Extracellular Matrix, Humans, Hydroxyproline, Models, Genetic, Mutation, Peptide Fragments, Peptide Mapping, Sequence Tagged Sites, Tandem Mass Spectrometry, Yeasts
Added March 5, 2014
0 Communities
4 Members
0 Resources
18 MeSH Terms
Identification of phosphorylation sites within the signaling adaptor APPL1 by mass spectrometry.
Gant-Branum RL, Broussard JA, Mahsut A, Webb DJ, McLean JA
(2010) J Proteome Res 9: 1541-8
MeSH Terms: Adaptor Proteins, Signal Transducing, Amino Acid Sequence, Humans, Molecular Sequence Data, Peptide Hydrolases, Peptide Mapping, Phosphoproteins, Phosphorylation, Phosphotransferases, Protein Structure, Tertiary, Sequence Alignment, Tandem Mass Spectrometry
Added May 20, 2014
0 Communities
1 Members
0 Resources
12 MeSH Terms
IDPicker 2.0: Improved protein assembly with high discrimination peptide identification filtering.
Ma ZQ, Dasari S, Chambers MC, Litton MD, Sobecki SM, Zimmerman LJ, Halvey PJ, Schilling B, Drake PM, Gibson BW, Tabb DL
(2009) J Proteome Res 8: 3872-81
MeSH Terms: Algorithms, Blood Proteins, Cell Line, Tumor, Databases, Protein, Humans, Neoplasm Proteins, Peptide Fragments, Peptide Mapping, Proteomics, Reproducibility of Results, Software, Tandem Mass Spectrometry, User-Computer Interface
Added August 2, 2013
0 Communities
2 Members
0 Resources
13 MeSH Terms
Identification and functional analysis of phosphorylated tyrosine residues within EphA2 receptor tyrosine kinase.
Fang WB, Brantley-Sieders DM, Hwang Y, Ham AJ, Chen J
(2008) J Biol Chem 283: 16017-26
MeSH Terms: Amino Acid Substitution, Animals, Cell Movement, Endothelial Cells, Ephrin-A1, Guanine Nucleotide Exchange Factors, Mice, Mice, Transgenic, Mutation, Missense, Neoplasm Invasiveness, Neovascularization, Pathologic, Neuropeptides, Peptide Mapping, Phosphatidylinositol 3-Kinases, Phosphorylation, Protein Binding, Protein Structure, Tertiary, Proto-Oncogene Proteins c-vav, Receptor, EphA2, Signal Transduction, Tyrosine, rac GTP-Binding Proteins, rac1 GTP-Binding Protein
Added March 5, 2014
1 Communities
1 Members
0 Resources
23 MeSH Terms
Imaging mass spectrometry of proteins and peptides: 3D volume reconstruction.
Andersson M, Groseclose MR, Deutch AY, Caprioli RM
(2008) Nat Methods 5: 101-8
MeSH Terms: Image Enhancement, Image Interpretation, Computer-Assisted, Imaging, Three-Dimensional, Magnetic Resonance Imaging, Mass Spectrometry, Peptide Mapping, Systems Integration
Added March 5, 2014
0 Communities
2 Members
0 Resources
7 MeSH Terms
Integrating spatially resolved three-dimensional MALDI IMS with in vivo magnetic resonance imaging.
Sinha TK, Khatib-Shahidi S, Yankeelov TE, Mapara K, Ehtesham M, Cornett DS, Dawant BM, Caprioli RM, Gore JC
(2008) Nat Methods 5: 57-9
MeSH Terms: Animals, Brain, Imaging, Three-Dimensional, Magnetic Resonance Imaging, Mice, Peptide Mapping, Proteome, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization, Systems Integration, Tissue Distribution
Added November 13, 2013
0 Communities
4 Members
0 Resources
10 MeSH Terms
Proteomic parsimony through bipartite graph analysis improves accuracy and transparency.
Zhang B, Chambers MC, Tabb DL
(2007) J Proteome Res 6: 3549-57
MeSH Terms: Chromatography, Liquid, Cluster Analysis, Complement System Proteins, Databases, Protein, Fungal Proteins, Humans, Mass Spectrometry, Peptide Mapping, Peptides, Proteins, Proteome, Proteomics, Reproducibility of Results
Added March 5, 2014
0 Communities
2 Members
0 Resources
13 MeSH Terms