Other search tools

About this data

The publication data currently available has been vetted by Vanderbilt faculty, staff, administrators and trainees. The data itself is retrieved directly from NCBI's PubMed and is automatically updated on a weekly basis to ensure accuracy and completeness.

If you have any questions or comments, please contact us.

Results: 11 to 20 of 67

Publication Record

Connections

Extensive Copy Number Variation in Fermentation-Related Genes Among Wine Strains.
Steenwyk J, Rokas A
(2017) G3 (Bethesda) 7: 1475-1485
MeSH Terms: DNA Copy Number Variations, Fermentation, Genes, Fungal, Saccharomyces cerevisiae, Wine
Added April 6, 2017
0 Communities
1 Members
0 Resources
5 MeSH Terms
Integrated Molecular Characterization of Uterine Carcinosarcoma.
Cherniack AD, Shen H, Walter V, Stewart C, Murray BA, Bowlby R, Hu X, Ling S, Soslow RA, Broaddus RR, Zuna RE, Robertson G, Laird PW, Kucherlapati R, Mills GB, Cancer Genome Atlas Research Network, Weinstein JN, Zhang J, Akbani R, Levine DA
(2017) Cancer Cell 31: 411-423
MeSH Terms: Carcinosarcoma, DNA Copy Number Variations, Epithelial-Mesenchymal Transition, Female, Humans, Mutation, Uterine Neoplasms
Added October 30, 2019
0 Communities
1 Members
0 Resources
MeSH Terms
Integrated molecular analysis reveals complex interactions between genomic and epigenomic alterations in esophageal adenocarcinomas.
Peng D, Guo Y, Chen H, Zhao S, Washington K, Hu T, Shyr Y, El-Rifai W
(2017) Sci Rep 7: 40729
MeSH Terms: Adenocarcinoma, Cell Line, Tumor, Comparative Genomic Hybridization, Computational Biology, DNA Copy Number Variations, DNA Methylation, Epigenesis, Genetic, Epigenomics, Esophageal Neoplasms, Gene Expression Profiling, Gene Expression Regulation, Neoplastic, Gene Ontology, Gene Regulatory Networks, Genomics, Humans
Added April 18, 2017
0 Communities
1 Members
0 Resources
15 MeSH Terms
Mutational landscape of EGFR-, MYC-, and Kras-driven genetically engineered mouse models of lung adenocarcinoma.
McFadden DG, Politi K, Bhutkar A, Chen FK, Song X, Pirun M, Santiago PM, Kim-Kiselak C, Platt JT, Lee E, Hodges E, Rosebrock AP, Bronson RT, Socci ND, Hannon GJ, Jacks T, Varmus H
(2016) Proc Natl Acad Sci U S A 113: E6409-E6417
MeSH Terms: Adenocarcinoma, Adenocarcinoma of Lung, Animals, Carcinogens, Cell Transformation, Neoplastic, DNA Copy Number Variations, DNA Mutational Analysis, Disease Models, Animal, ErbB Receptors, Gene Dosage, Genes, myc, Genes, ras, Genome-Wide Association Study, Lung Neoplasms, Mice, Mice, Transgenic, Mutation, Point Mutation, ROC Curve, Whole Exome Sequencing
Added April 26, 2017
0 Communities
1 Members
0 Resources
20 MeSH Terms
Competing for Iron: Duplication and Amplification of the isd Locus in Staphylococcus lugdunensis HKU09-01 Provides a Competitive Advantage to Overcome Nutritional Limitation.
Heilbronner S, Monk IR, Brozyna JR, Heinrichs DE, Skaar EP, Peschel A, Foster TJ
(2016) PLoS Genet 12: e1006246
MeSH Terms: DNA Copy Number Variations, Endocarditis, Bacterial, Gene Duplication, Genetic Loci, Heme, Hemoglobins, Humans, Iron, Iron-Regulatory Proteins, Staphylococcal Infections, Staphylococcus lugdunensis, Surface Properties
Added April 8, 2017
0 Communities
1 Members
0 Resources
12 MeSH Terms
Distinct patterns of somatic genome alterations in lung adenocarcinomas and squamous cell carcinomas.
Campbell JD, Alexandrov A, Kim J, Wala J, Berger AH, Pedamallu CS, Shukla SA, Guo G, Brooks AN, Murray BA, Imielinski M, Hu X, Ling S, Akbani R, Rosenberg M, Cibulskis C, Ramachandran A, Collisson EA, Kwiatkowski DJ, Lawrence MS, Weinstein JN, Verhaak RG, Wu CJ, Hammerman PS, Cherniack AD, Getz G, Cancer Genome Atlas Research Network, Artyomov MN, Schreiber R, Govindan R, Meyerson M
(2016) Nat Genet 48: 607-16
MeSH Terms: Adenocarcinoma, Antigens, Neoplasm, Carcinoma, Squamous Cell, DNA Copy Number Variations, Genome, Human, Humans, Lung Neoplasms, Recurrence
Added August 8, 2016
0 Communities
1 Members
0 Resources
8 MeSH Terms
Genomic Characterization of Esophageal Squamous Cell Carcinoma Reveals Critical Genes Underlying Tumorigenesis and Poor Prognosis.
Qin HD, Liao XY, Chen YB, Huang SY, Xue WQ, Li FF, Ge XS, Liu DQ, Cai Q, Long J, Li XZ, Hu YZ, Zhang SD, Zhang LJ, Lehrman B, Scott AF, Lin D, Zeng YX, Shugart YY, Jia WH
(2016) Am J Hum Genet 98: 709-27
MeSH Terms: Adult, Aged, Aged, 80 and over, Animals, Carcinogenesis, Carcinoma, Squamous Cell, Carrier Proteins, Cell Cycle Proteins, Cell Line, Tumor, Cell Proliferation, DNA Copy Number Variations, Esophageal Neoplasms, Esophageal Squamous Cell Carcinoma, Exome, Fas-Associated Death Domain Protein, Female, Gene Expression Profiling, Gene Expression Regulation, Neoplastic, Genetic Association Studies, Humans, Male, Membrane Proteins, Mice, Mice, Inbred BALB C, MicroRNAs, Middle Aged, Mutation, Nerve Tissue Proteins, Prognosis, Selection, Genetic, Trans-Activators, Xenograft Model Antitumor Assays
Added April 3, 2018
0 Communities
1 Members
0 Resources
32 MeSH Terms
Identification of p62/SQSTM1 as a component of non-canonical Wnt VANGL2-JNK signalling in breast cancer.
Puvirajesinghe TM, Bertucci F, Jain A, Scerbo P, Belotti E, Audebert S, Sebbagh M, Lopez M, Brech A, Finetti P, Charafe-Jauffret E, Chaffanet M, Castellano R, Restouin A, Marchetto S, Collette Y, Gonçalvès A, Macara I, Birnbaum D, Kodjabachian L, Johansen T, Borg JP
(2016) Nat Commun 7: 10318
MeSH Terms: Adaptor Proteins, Signal Transducing, Animals, Blotting, Western, Breast Neoplasms, Carcinoma, Ductal, Breast, Carcinoma, Lobular, Cell Line, Tumor, Cell Migration Assays, Cell Movement, Cell Polarity, Cell Proliferation, DNA Copy Number Variations, Embryo, Nonmammalian, Female, Humans, Immunoprecipitation, Intracellular Signaling Peptides and Proteins, MAP Kinase Signaling System, Mass Spectrometry, Membrane Proteins, Mice, Microscopy, Electron, Middle Aged, Neoplasm Transplantation, Prognosis, Proportional Hazards Models, RNA, Messenger, Sequestosome-1 Protein, Wnt Signaling Pathway, Xenopus
Added April 10, 2018
0 Communities
1 Members
0 Resources
MeSH Terms
Joint detection of copy number variations in parent-offspring trios.
Liu Y, Liu J, Lu J, Peng J, Juan L, Zhu X, Li B, Wang Y
(2016) Bioinformatics 32: 1130-7
MeSH Terms: Algorithms, DNA Copy Number Variations, Genome, Humans, Parents, Software
Added February 15, 2016
0 Communities
1 Members
0 Resources
6 MeSH Terms
The impact of human copy number variation on gene expression.
Gamazon ER, Stranger BE
(2015) Brief Funct Genomics 14: 352-7
MeSH Terms: DNA Copy Number Variations, Genome, Human, Genome-Wide Association Study, Humans, Phenotype, Transcriptome
Added April 13, 2017
0 Communities
1 Members
0 Resources
6 MeSH Terms