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The publication data currently available has been vetted by Vanderbilt faculty, staff, administrators and trainees. The data itself is retrieved directly from NCBI's PubMed and is automatically updated on a weekly basis to ensure accuracy and completeness.

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Results: 1 to 10 of 31

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Mechanisms of Insertion of dCTP and dTTP Opposite the DNA Lesion O6-Methyl-2'-deoxyguanosine by Human DNA Polymerase η.
Patra A, Zhang Q, Guengerich FP, Egli M
(2016) J Biol Chem 291: 24304-24313
MeSH Terms: Bacterial Proteins, Crystallography, X-Ray, DNA, DNA Polymerase beta, DNA-Directed DNA Polymerase, Deoxycytosine Nucleotides, Humans, Sulfolobus solfataricus, Thymine Nucleotides
Added March 14, 2018
0 Communities
1 Members
0 Resources
9 MeSH Terms
Structural Basis for Error-Free Bypass of the 5-N-Methylformamidopyrimidine-dG Lesion by Human DNA Polymerase η and Sulfolobus solfataricus P2 Polymerase IV.
Patra A, Banerjee S, Johnson Salyard TL, Malik CK, Christov PP, Rizzo CJ, Stone MP, Egli M
(2015) J Am Chem Soc 137: 7011-4
MeSH Terms: DNA Damage, DNA-Directed DNA Polymerase, Deoxyguanosine, Models, Molecular, Pyrimidines, Sulfolobus solfataricus
Added January 7, 2016
0 Communities
1 Members
0 Resources
6 MeSH Terms
Replication, repair, and translesion polymerase bypass of N⁶-oxopropenyl-2'-deoxyadenosine.
Maddukuri L, Shuck SC, Eoff RL, Zhao L, Rizzo CJ, Guengerich FP, Marnett LJ
(2013) Biochemistry 52: 8766-76
MeSH Terms: DNA Polymerase I, DNA Repair, DNA Replication, DNA-Directed DNA Polymerase, Deoxyadenosines, Humans, Kinetics, Mutagenicity Tests, Mutagens, Sulfolobus solfataricus
Added March 7, 2014
0 Communities
3 Members
0 Resources
10 MeSH Terms
Incorporation of nucleoside probes opposite O⁶-methylguanine by Sulfolobus solfataricus DNA polymerase Dpo4: importance of hydrogen bonding.
Stornetta A, Angelov T, Guengerich FP, Sturla SJ
(2013) Chembiochem 14: 1634-9
MeSH Terms: DNA Polymerase beta, Fluorescent Dyes, Guanine, Hydrogen Bonding, Molecular Structure, Nucleosides, Sulfolobus solfataricus
Added March 7, 2014
0 Communities
1 Members
0 Resources
7 MeSH Terms
Ring-opening of the γ-OH-PdG adduct promotes error-free bypass by the Sulfolobus solfataricus DNA polymerase Dpo4.
Shanmugam G, Minko IG, Banerjee S, Christov PP, Kozekov ID, Rizzo CJ, Lloyd RS, Egli M, Stone MP
(2013) Chem Res Toxicol 26: 1348-60
MeSH Terms: Crystallography, X-Ray, DNA Adducts, DNA Polymerase beta, Deoxyguanosine, Models, Molecular, Molecular Structure, Sulfolobus solfataricus
Added March 7, 2014
0 Communities
3 Members
0 Resources
7 MeSH Terms
Differential furanose selection in the active sites of archaeal DNA polymerases probed by fixed-conformation nucleotide analogues.
Ketkar A, Zafar MK, Banerjee S, Marquez VE, Egli M, Eoff RL
(2012) Biochemistry 51: 9234-44
MeSH Terms: Carbohydrate Conformation, Catalytic Domain, Crystallography, X-Ray, DNA, Archaeal, DNA-Directed DNA Polymerase, Deoxyadenine Nucleotides, Deoxyribonucleotides, Nucleic Acid Conformation, Substrate Specificity, Sulfolobus solfataricus
Added May 27, 2014
0 Communities
1 Members
0 Resources
10 MeSH Terms
Effects of N(2)-alkylguanine, O(6)-alkylguanine, and abasic lesions on DNA binding and bypass synthesis by the euryarchaeal B-family DNA polymerase vent (exo(-)).
Lim S, Song I, Guengerich FP, Choi JY
(2012) Chem Res Toxicol 25: 1699-707
MeSH Terms: DNA, DNA Adducts, DNA Primers, DNA Replication, DNA-Directed DNA Polymerase, Electrophoretic Mobility Shift Assay, Guanine, Kinetics, Sulfolobus solfataricus, Thermococcus
Added March 26, 2014
0 Communities
1 Members
0 Resources
10 MeSH Terms
Replication bypass of the trans-4-Hydroxynonenal-derived (6S,8R,11S)-1,N(2)-deoxyguanosine DNA adduct by the sulfolobus solfataricus DNA polymerase IV.
Banerjee S, Christov PP, Kozekova A, Rizzo CJ, Egli M, Stone MP
(2012) Chem Res Toxicol 25: 422-35
MeSH Terms: Aldehydes, Archaeal Proteins, DNA Adducts, DNA Polymerase beta, DNA Replication, Deoxyguanosine, Sulfolobus solfataricus
Added March 7, 2014
0 Communities
3 Members
0 Resources
7 MeSH Terms
Bypass of aflatoxin B1 adducts by the Sulfolobus solfataricus DNA polymerase IV.
Banerjee S, Brown KL, Egli M, Stone MP
(2011) J Am Chem Soc 133: 12556-68
MeSH Terms: Aflatoxin B1, Crystallography, X-Ray, DNA Adducts, DNA Polymerase beta, Models, Molecular, Mutation, Sulfolobus solfataricus
Added March 7, 2014
0 Communities
3 Members
0 Resources
7 MeSH Terms
Roles of the four DNA polymerases of the crenarchaeon Sulfolobus solfataricus and accessory proteins in DNA replication.
Choi JY, Eoff RL, Pence MG, Wang J, Martin MV, Kim EJ, Folkmann LM, Guengerich FP
(2011) J Biol Chem 286: 31180-93
MeSH Terms: Bacterial Proteins, DNA, DNA Damage, DNA Polymerase I, DNA Polymerase II, DNA Polymerase III, DNA Polymerase beta, DNA Replication, DNA-Directed DNA Polymerase, Sulfolobus solfataricus
Added March 7, 2014
0 Communities
2 Members
0 Resources
10 MeSH Terms