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The publication data currently available has been vetted by Vanderbilt faculty, staff, administrators and trainees. The data itself is retrieved directly from NCBI's PubMed and is automatically updated on a weekly basis to ensure accuracy and completeness.

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Results: 1 to 10 of 330

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Tuning Hsf1 levels drives distinct fungal morphogenetic programs with depletion impairing Hsp90 function and overexpression expanding the target space.
Veri AO, Miao Z, Shapiro RS, Tebbji F, O'Meara TR, Kim SH, Colazo J, Tan K, Vyas VK, Whiteway M, Robbins N, Wong KH, Cowen LE
(2018) PLoS Genet 14: e1007270
MeSH Terms: Blotting, Western, Candida albicans, Chromatin Immunoprecipitation, Genes, Fungal, HSP90 Heat-Shock Proteins, Heat Shock Transcription Factors, Morphogenesis, Oligonucleotide Array Sequence Analysis, Reverse Transcriptase Polymerase Chain Reaction, Sequence Analysis, RNA, Temperature, Virulence
Added November 7, 2019
0 Communities
1 Members
0 Resources
MeSH Terms
StrandScript: evaluation of Illumina genotyping array design and strand correction.
Wang J, Samuels DC, Shyr Y, Guo Y
(2017) Bioinformatics 33: 2399-2401
MeSH Terms: Genotyping Techniques, Humans, Oligonucleotide Array Sequence Analysis, Polymorphism, Single Nucleotide, Sequence Analysis, DNA, Software
Added April 18, 2017
0 Communities
2 Members
0 Resources
6 MeSH Terms
Strategies for processing and quality control of Illumina genotyping arrays.
Zhao S, Jing W, Samuels DC, Sheng Q, Shyr Y, Guo Y
(2018) Brief Bioinform 19: 765-775
MeSH Terms: Algorithms, Cluster Analysis, Computational Biology, Female, Gene Frequency, Genome-Wide Association Study, Genotype, Genotyping Techniques, High-Throughput Nucleotide Sequencing, Humans, Male, Models, Genetic, Oligonucleotide Array Sequence Analysis, Polymorphism, Single Nucleotide, Quality Control, Racial Groups, Software
Added April 18, 2017
0 Communities
1 Members
0 Resources
17 MeSH Terms
Integrated expression analysis identifies transcription networks in mouse and human gastric neoplasia.
Chen Z, Soutto M, Rahman B, Fazili MW, Peng D, Blanca Piazuelo M, Chen H, Kay Washington M, Shyr Y, El-Rifai W
(2017) Genes Chromosomes Cancer 56: 535-547
MeSH Terms: Animals, Computational Biology, Disease Models, Animal, Gastric Mucosa, Gene Expression Profiling, Gene Regulatory Networks, Humans, Mice, Oligonucleotide Array Sequence Analysis, Stomach, Stomach Neoplasms
Added April 18, 2017
0 Communities
1 Members
0 Resources
11 MeSH Terms
OSBPL10, RXRA and lipid metabolism confer African-ancestry protection against dengue haemorrhagic fever in admixed Cubans.
Sierra B, Triska P, Soares P, Garcia G, Perez AB, Aguirre E, Oliveira M, Cavadas B, Regnault B, Alvarez M, Ruiz D, Samuels DC, Sakuntabhai A, Pereira L, Guzman MG
(2017) PLoS Pathog 13: e1006220
MeSH Terms: Blacks, Cuba, Genetic Predisposition to Disease, Genome-Wide Association Study, Genotype, Humans, Lipid Metabolism, Oligonucleotide Array Sequence Analysis, Polymerase Chain Reaction, Polymorphism, Single Nucleotide, Receptors, Steroid, Retinoid X Receptor alpha, Severe Dengue
Added March 21, 2018
0 Communities
1 Members
0 Resources
13 MeSH Terms
Multiethnic Exome-Wide Association Study of Subclinical Atherosclerosis.
Natarajan P, Bis JC, Bielak LF, Cox AJ, Dörr M, Feitosa MF, Franceschini N, Guo X, Hwang SJ, Isaacs A, Jhun MA, Kavousi M, Li-Gao R, Lyytikäinen LP, Marioni RE, Schminke U, Stitziel NO, Tada H, van Setten J, Smith AV, Vojinovic D, Yanek LR, Yao J, Yerges-Armstrong LM, Amin N, Baber U, Borecki IB, Carr JJ, Chen YI, Cupples LA, de Jong PA, de Koning H, de Vos BD, Demirkan A, Fuster V, Franco OH, Goodarzi MO, Harris TB, Heckbert SR, Heiss G, Hoffmann U, Hofman A, Išgum I, Jukema JW, Kähönen M, Kardia SL, Kral BG, Launer LJ, Massaro J, Mehran R, Mitchell BD, Mosley TH, de Mutsert R, Newman AB, Nguyen KD, North KE, O'Connell JR, Oudkerk M, Pankow JS, Peloso GM, Post W, Province MA, Raffield LM, Raitakari OT, Reilly DF, Rivadeneira F, Rosendaal F, Sartori S, Taylor KD, Teumer A, Trompet S, Turner ST, Uitterlinden AG, Vaidya D, van der Lugt A, Völker U, Wardlaw JM, Wassel CL, Weiss S, Wojczynski MK, Becker DM, Becker LC, Boerwinkle E, Bowden DW, Deary IJ, Dehghan A, Felix SB, Gudnason V, Lehtimäki T, Mathias R, Mook-Kanamori DO, Psaty BM, Rader DJ, Rotter JI, Wilson JG, van Duijn CM, Völzke H, Kathiresan S, Peyser PA, O'Donnell CJ, CHARGE Consortium
(2016) Circ Cardiovasc Genet 9: 511-520
MeSH Terms: Apolipoprotein B-100, Apolipoprotein E2, Asymptomatic Diseases, Blacks, Carotid Artery Diseases, Carotid Intima-Media Thickness, Cholesterol, LDL, Computed Tomography Angiography, Coronary Angiography, Coronary Artery Disease, Exome, Gene Frequency, Genetic Markers, Genetic Predisposition to Disease, Genome-Wide Association Study, Humans, Odds Ratio, Oligonucleotide Array Sequence Analysis, Phenotype, Prognosis, Risk Assessment, Risk Factors, Vascular Calcification, Whites
Added September 11, 2017
0 Communities
1 Members
0 Resources
24 MeSH Terms
Evaluation of frozen tissue-derived prognostic gene expression signatures in FFPE colorectal cancer samples.
Zhu J, Deane NG, Lewis KB, Padmanabhan C, Washington MK, Ciombor KK, Timmers C, Goldberg RM, Beauchamp RD, Chen X
(2016) Sci Rep 6: 33273
MeSH Terms: Colorectal Neoplasms, Disease-Free Survival, Female, Formaldehyde, Gene Expression Regulation, Neoplastic, Humans, Male, Neoplasm Recurrence, Local, Oligonucleotide Array Sequence Analysis, Paraffin Embedding, Prognosis, Tissue Fixation, Transcriptome
Added November 12, 2016
1 Communities
1 Members
0 Resources
13 MeSH Terms
Meta-analysis identifies common and rare variants influencing blood pressure and overlapping with metabolic trait loci.
Liu C, Kraja AT, Smith JA, Brody JA, Franceschini N, Bis JC, Rice K, Morrison AC, Lu Y, Weiss S, Guo X, Palmas W, Martin LW, Chen YD, Surendran P, Drenos F, Cook JP, Auer PL, Chu AY, Giri A, Zhao W, Jakobsdottir J, Lin LA, Stafford JM, Amin N, Mei H, Yao J, Voorman A, CHD Exome+ Consortium, ExomeBP Consortium, GoT2DGenes Consortium, T2D-GENES Consortium, Larson MG, Grove ML, Smith AV, Hwang SJ, Chen H, Huan T, Kosova G, Stitziel NO, Kathiresan S, Samani N, Schunkert H, Deloukas P, Myocardial Infarction Genetics and CARDIoGRAM Exome Consortia, Li M, Fuchsberger C, Pattaro C, Gorski M, CKDGen Consortium, Kooperberg C, Papanicolaou GJ, Rossouw JE, Faul JD, Kardia SL, Bouchard C, Raffel LJ, Uitterlinden AG, Franco OH, Vasan RS, O'Donnell CJ, Taylor KD, Liu K, Bottinger EP, Gottesman O, Daw EW, Giulianini F, Ganesh S, Salfati E, Harris TB, Launer LJ, Dörr M, Felix SB, Rettig R, Völzke H, Kim E, Lee WJ, Lee IT, Sheu WH, Tsosie KS, Edwards DR, Liu Y, Correa A, Weir DR, Völker U, Ridker PM, Boerwinkle E, Gudnason V, Reiner AP, van Duijn CM, Borecki IB, Edwards TL, Chakravarti A, Rotter JI, Psaty BM, Loos RJ, Fornage M, Ehret GB, Newton-Cheh C, Levy D, Chasman DI
(2016) Nat Genet 48: 1162-70
MeSH Terms: Blood Pressure, Exome, Genetic Variation, Genome, Human, Genome-Wide Association Study, Genotype, Humans, Hypertension, Oligonucleotide Array Sequence Analysis, Polymorphism, Single Nucleotide
Added April 26, 2017
0 Communities
1 Members
0 Resources
10 MeSH Terms
Comparison of Nanostring nCounter® Data on FFPE Colon Cancer Samples and Affymetrix Microarray Data on Matched Frozen Tissues.
Chen X, Deane NG, Lewis KB, Li J, Zhu J, Washington MK, Beauchamp RD
(2016) PLoS One 11: e0153784
MeSH Terms: Colonic Neoplasms, Formaldehyde, Frozen Sections, Gene Expression Regulation, Neoplastic, Humans, Oligonucleotide Array Sequence Analysis, Paraffin Embedding, RNA, Neoplasm, Survival Analysis, Tissue Fixation
Added August 10, 2016
1 Communities
1 Members
0 Resources
10 MeSH Terms
Genetic Association Analysis of Drusen Progression.
Hoffman JD, van Grinsven MJ, Li C, Brantley M, McGrath J, Agarwal A, Scott WK, Schwartz SG, Kovach J, Pericak-Vance M, Sanchez CI, Haines JL
(2016) Invest Ophthalmol Vis Sci 57: 2225-31
MeSH Terms: Aged, Disease Progression, Female, Fundus Oculi, Genetic Association Studies, Genetic Predisposition to Disease, Genotyping Techniques, Humans, Macular Degeneration, Male, Oligonucleotide Array Sequence Analysis, Polymorphism, Single Nucleotide, Retinal Drusen, Risk Factors
Added February 23, 2017
0 Communities
1 Members
0 Resources
14 MeSH Terms