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The publication data currently available has been vetted by Vanderbilt faculty, staff, administrators and trainees. The data itself is retrieved directly from NCBI's PubMed and is automatically updated on a weekly basis to ensure accuracy and completeness.

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Results: 1 to 10 of 12

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Rif1 inhibits replication fork progression and controls DNA copy number in Drosophila.
Munden A, Rong Z, Sun A, Gangula R, Mallal S, Nordman JT
(2018) Elife 7:
MeSH Terms: Amino Acid Sequence, Animals, Carrier Proteins, DNA, DNA Replication, DNA-Binding Proteins, Drosophila Proteins, Drosophila melanogaster, Gene Dosage, Genome, Insect, Heat-Shock Response, Heterochromatin, Mutation, Protein Binding, Protein Domains, Reproducibility of Results, Salivary Glands
Added March 3, 2020
0 Communities
1 Members
0 Resources
MeSH Terms
A Genome-Scale Investigation of Incongruence in Culicidae Mosquitoes.
Wang Y, Zhou X, Yang D, Rokas A
(2015) Genome Biol Evol 7: 3463-71
MeSH Terms: Animals, Anopheles, Genome, Insect, Phylogeny, Selection, Genetic
Added February 22, 2016
0 Communities
2 Members
0 Resources
5 MeSH Terms
Mosquito genomics. Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes.
Neafsey DE, Waterhouse RM, Abai MR, Aganezov SS, Alekseyev MA, Allen JE, Amon J, Arcà B, Arensburger P, Artemov G, Assour LA, Basseri H, Berlin A, Birren BW, Blandin SA, Brockman AI, Burkot TR, Burt A, Chan CS, Chauve C, Chiu JC, Christensen M, Costantini C, Davidson VL, Deligianni E, Dottorini T, Dritsou V, Gabriel SB, Guelbeogo WM, Hall AB, Han MV, Hlaing T, Hughes DS, Jenkins AM, Jiang X, Jungreis I, Kakani EG, Kamali M, Kemppainen P, Kennedy RC, Kirmitzoglou IK, Koekemoer LL, Laban N, Langridge N, Lawniczak MK, Lirakis M, Lobo NF, Lowy E, MacCallum RM, Mao C, Maslen G, Mbogo C, McCarthy J, Michel K, Mitchell SN, Moore W, Murphy KA, Naumenko AN, Nolan T, Novoa EM, O'Loughlin S, Oringanje C, Oshaghi MA, Pakpour N, Papathanos PA, Peery AN, Povelones M, Prakash A, Price DP, Rajaraman A, Reimer LJ, Rinker DC, Rokas A, Russell TL, Sagnon N, Sharakhova MV, Shea T, Simão FA, Simard F, Slotman MA, Somboon P, Stegniy V, Struchiner CJ, Thomas GW, Tojo M, Topalis P, Tubio JM, Unger MF, Vontas J, Walton C, Wilding CS, Willis JH, Wu YC, Yan G, Zdobnov EM, Zhou X, Catteruccia F, Christophides GK, Collins FH, Cornman RS, Crisanti A, Donnelly MJ, Emrich SJ, Fontaine MC, Gelbart W, Hahn MW, Hansen IA, Howell PI, Kafatos FC, Kellis M, Lawson D, Louis C, Luckhart S, Muskavitch MA, Ribeiro JM, Riehle MA, Sharakhov IV, Tu Z, Zwiebel LJ, Besansky NJ
(2015) Science 347: 1258522
MeSH Terms: Animals, Anopheles, Base Sequence, Chromosomes, Insect, Drosophila, Evolution, Molecular, Genome, Insect, Humans, Insect Vectors, Malaria, Molecular Sequence Data, Phylogeny, Sequence Alignment
Added February 19, 2015
0 Communities
3 Members
0 Resources
13 MeSH Terms
Insect Innate Immunity Database (IIID): an annotation tool for identifying immune genes in insect genomes.
Brucker RM, Funkhouser LJ, Setia S, Pauly R, Bordenstein SR
(2012) PLoS One 7: e45125
MeSH Terms: Animals, Databases, Genetic, Genes, Insect, Genome, Insect, Immunity, Innate, Insect Proteins, Insecta, Internet, Species Specificity, Wasps
Added October 8, 2015
0 Communities
1 Members
0 Resources
10 MeSH Terms
Identification of functional elements and regulatory circuits by Drosophila modENCODE.
modENCODE Consortium, Roy S, Ernst J, Kharchenko PV, Kheradpour P, Negre N, Eaton ML, Landolin JM, Bristow CA, Ma L, Lin MF, Washietl S, Arshinoff BI, Ay F, Meyer PE, Robine N, Washington NL, Di Stefano L, Berezikov E, Brown CD, Candeias R, Carlson JW, Carr A, Jungreis I, Marbach D, Sealfon R, Tolstorukov MY, Will S, Alekseyenko AA, Artieri C, Booth BW, Brooks AN, Dai Q, Davis CA, Duff MO, Feng X, Gorchakov AA, Gu T, Henikoff JG, Kapranov P, Li R, MacAlpine HK, Malone J, Minoda A, Nordman J, Okamura K, Perry M, Powell SK, Riddle NC, Sakai A, Samsonova A, Sandler JE, Schwartz YB, Sher N, Spokony R, Sturgill D, van Baren M, Wan KH, Yang L, Yu C, Feingold E, Good P, Guyer M, Lowdon R, Ahmad K, Andrews J, Berger B, Brenner SE, Brent MR, Cherbas L, Elgin SC, Gingeras TR, Grossman R, Hoskins RA, Kaufman TC, Kent W, Kuroda MI, Orr-Weaver T, Perrimon N, Pirrotta V, Posakony JW, Ren B, Russell S, Cherbas P, Graveley BR, Lewis S, Micklem G, Oliver B, Park PJ, Celniker SE, Henikoff S, Karpen GH, Lai EC, MacAlpine DM, Stein LD, White KP, Kellis M
(2010) Science 330: 1787-97
MeSH Terms: Animals, Binding Sites, Chromatin, Computational Biology, Drosophila Proteins, Drosophila melanogaster, Epigenesis, Genetic, Gene Expression Regulation, Gene Regulatory Networks, Genes, Insect, Genome, Insect, Genomics, Histones, Molecular Sequence Annotation, Nucleosomes, Promoter Regions, Genetic, RNA, Small Untranslated, Transcription Factors, Transcription, Genetic
Added March 3, 2020
0 Communities
1 Members
0 Resources
MeSH Terms
Functional and evolutionary insights from the genomes of three parasitoid Nasonia species.
Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Nasonia Genome Working Group, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van de Zande L, Worley KC, Zdobnov EM, Aerts M, Albert S, Anaya VH, Anzola JM, Barchuk AR, Behura SK, Bera AN, Berenbaum MR, Bertossa RC, Bitondi MM, Bordenstein SR, Bork P, Bornberg-Bauer E, Brunain M, Cazzamali G, Chaboub L, Chacko J, Chavez D, Childers CP, Choi JH, Clark ME, Claudianos C, Clinton RA, Cree AG, Cristino AS, Dang PM, Darby AC, de Graaf DC, Devreese B, Dinh HH, Edwards R, Elango N, Elhaik E, Ermolaeva O, Evans JD, Foret S, Fowler GR, Gerlach D, Gibson JD, Gilbert DG, Graur D, Gründer S, Hagen DE, Han Y, Hauser F, Hultmark D, Hunter HC, Hurst GD, Jhangian SN, Jiang H, Johnson RM, Jones AK, Junier T, Kadowaki T, Kamping A, Kapustin Y, Kechavarzi B, Kim J, Kim J, Kiryutin B, Koevoets T, Kovar CL, Kriventseva EV, Kucharski R, Lee H, Lee SL, Lees K, Lewis LR, Loehlin DW, Logsdon JM, Lopez JA, Lozado RJ, Maglott D, Maleszka R, Mayampurath A, Mazur DJ, McClure MA, Moore AD, Morgan MB, Muller J, Munoz-Torres MC, Muzny DM, Nazareth LV, Neupert S, Nguyen NB, Nunes FM, Oakeshott JG, Okwuonu GO, Pannebakker BA, Pejaver VR, Peng Z, Pratt SC, Predel R, Pu LL, Ranson H, Raychoudhury R, Rechtsteiner A, Reese JT, Reid JG, Riddle M, Robertson HM, Romero-Severson J, Rosenberg M, Sackton TB, Sattelle DB, Schlüns H, Schmitt T, Schneider M, Schüler A, Schurko AM, Shuker DM, Simões ZL, Sinha S, Smith Z, Solovyev V, Souvorov A, Springauf A, Stafflinger E, Stage DE, Stanke M, Tanaka Y, Telschow A, Trent C, Vattathil S, Verhulst EC, Viljakainen L, Wanner KW, Waterhouse RM, Whitfield JB, Wilkes TE, Williamson M, Willis JH, Wolschin F, Wyder S, Yamada T, Yi SV, Zecher CN, Zhang L, Gibbs RA
(2010) Science 327: 343-8
MeSH Terms: Animals, Arthropods, Biological Evolution, DNA Methylation, DNA Transposable Elements, Female, Gene Transfer, Horizontal, Genes, Insect, Genetic Speciation, Genetic Variation, Genome, Insect, Host-Parasite Interactions, Insect Proteins, Insect Viruses, Insecta, Male, Molecular Sequence Data, Quantitative Trait Loci, Recombination, Genetic, Sequence Analysis, DNA, Wasp Venoms, Wasps, Wolbachia
Added February 8, 2016
0 Communities
1 Members
0 Resources
23 MeSH Terms
Evolutionary flux of canonical microRNAs and mirtrons in Drosophila.
Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC
(2010) Nat Genet 42: 6-9; author reply 9-10
MeSH Terms: Animals, Base Sequence, Conserved Sequence, Drosophila, Evolution, Molecular, Gene Expression Profiling, Genes, Insect, Genome, Insect, MicroRNAs, Molecular Sequence Data, Nucleic Acid Conformation, Phylogeny, Selection, Genetic, Sequence Homology, Nucleic Acid
Added February 15, 2016
0 Communities
1 Members
0 Resources
14 MeSH Terms
Nucleosome organization in the Drosophila genome.
Mavrich TN, Jiang C, Ioshikhes IP, Li X, Venters BJ, Zanton SJ, Tomsho LP, Qi J, Glaser RL, Schuster SC, Gilmour DS, Albert I, Pugh BF
(2008) Nature 453: 358-62
MeSH Terms: Animals, Conserved Sequence, Drosophila melanogaster, Gene Expression Regulation, Genes, Insect, Genome, Insect, Histones, Nucleosomes, Promoter Regions, Genetic, RNA Polymerase II, Saccharomyces cerevisiae, Transcription Initiation Site, Transcription, Genetic
Added March 5, 2014
0 Communities
1 Members
0 Resources
13 MeSH Terms
Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures.
Stark A, Lin MF, Kheradpour P, Pedersen JS, Parts L, Carlson JW, Crosby MA, Rasmussen MD, Roy S, Deoras AN, Ruby JG, Brennecke J, Harvard FlyBase curators, Berkeley Drosophila Genome Project, Hodges E, Hinrichs AS, Caspi A, Paten B, Park SW, Han MV, Maeder ML, Polansky BJ, Robson BE, Aerts S, van Helden J, Hassan B, Gilbert DG, Eastman DA, Rice M, Weir M, Hahn MW, Park Y, Dewey CN, Pachter L, Kent WJ, Haussler D, Lai EC, Bartel DP, Hannon GJ, Kaufman TC, Eisen MB, Clark AG, Smith D, Celniker SE, Gelbart WM, Kellis M
(2007) Nature 450: 219-32
MeSH Terms: Animals, Base Sequence, Binding Sites, Conserved Sequence, Drosophila, Drosophila Proteins, Evolution, Molecular, Exons, Gene Expression Regulation, Genes, Insect, Genome, Insect, Genomics, MicroRNAs, Molecular Sequence Data, Organ Specificity, Phylogeny, Untranslated Regions
Added February 15, 2016
0 Communities
1 Members
0 Resources
17 MeSH Terms
Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes.
Stark A, Kheradpour P, Parts L, Brennecke J, Hodges E, Hannon GJ, Kellis M
(2007) Genome Res 17: 1865-79
MeSH Terms: Animals, Base Sequence, Drosophila melanogaster, Evolution, Molecular, Gene Expression Regulation, Genetic Markers, Genome, Insect, MicroRNAs, Molecular Sequence Data, Nucleic Acid Conformation, RNA Processing, Post-Transcriptional, Sequence Alignment
Added February 15, 2016
0 Communities
1 Members
0 Resources
12 MeSH Terms