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Results: 1 to 10 of 35

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Drivers of genetic diversity in secondary metabolic gene clusters within a fungal species.
Lind AL, Wisecaver JH, Lameiras C, Wiemann P, Palmer JM, Keller NP, Rodrigues F, Goldman GH, Rokas A
(2017) PLoS Biol 15: e2003583
MeSH Terms: Alleles, Aspergillus fumigatus, Biological Evolution, Fungal Proteins, Fungi, Genetic Variation, Genome, Fungal, Genomics, Metabolic Networks and Pathways, Multigene Family, Mutation, Polymorphism, Genetic, Secondary Metabolism
Added March 21, 2018
0 Communities
1 Members
0 Resources
13 MeSH Terms
Reconstructing the Backbone of the Saccharomycotina Yeast Phylogeny Using Genome-Scale Data.
Shen XX, Zhou X, Kominek J, Kurtzman CP, Hittinger CT, Rokas A
(2016) G3 (Bethesda) 6: 3927-3939
MeSH Terms: Ascomycota, Computational Biology, Genetic Markers, Genome, Fungal, Genomics, Phylogeny, Workflow
Added April 6, 2017
0 Communities
1 Members
0 Resources
7 MeSH Terms
Comparative genomics of biotechnologically important yeasts.
Riley R, Haridas S, Wolfe KH, Lopes MR, Hittinger CT, Göker M, Salamov AA, Wisecaver JH, Long TM, Calvey CH, Aerts AL, Barry KW, Choi C, Clum A, Coughlan AY, Deshpande S, Douglass AP, Hanson SJ, Klenk HP, LaButti KM, Lapidus A, Lindquist EA, Lipzen AM, Meier-Kolthoff JP, Ohm RA, Otillar RP, Pangilinan JL, Peng Y, Rokas A, Rosa CA, Scheuner C, Sibirny AA, Slot JC, Stielow JB, Sun H, Kurtzman CP, Blackwell M, Grigoriev IV, Jeffries TW
(2016) Proc Natl Acad Sci U S A 113: 9882-7
MeSH Terms: Ascomycota, Biotechnology, Evolution, Molecular, Fungal Proteins, Genetic Code, Genome, Fungal, Genomics, Metabolic Networks and Pathways, Phylogeny, Species Specificity, Yeasts
Added April 6, 2017
0 Communities
1 Members
0 Resources
11 MeSH Terms
A Genome-Scale Investigation of How Sequence, Function, and Tree-Based Gene Properties Influence Phylogenetic Inference.
Shen XX, Salichos L, Rokas A
(2016) Genome Biol Evol 8: 2565-80
MeSH Terms: Animals, Base Composition, Genome, Fungal, Mammals, Phylogeny, Sequence Alignment, Yeasts
Added April 6, 2017
0 Communities
1 Members
0 Resources
7 MeSH Terms
Endogenous Hot Spots of De Novo Telomere Addition in the Yeast Genome Contain Proximal Enhancers That Bind Cdc13.
Obodo UC, Epum EA, Platts MH, Seloff J, Dahlson NA, Velkovsky SM, Paul SR, Friedman KL
(2016) Mol Cell Biol 36: 1750-63
MeSH Terms: Binding Sites, DNA Breaks, Double-Stranded, DNA Repair, DNA, Fungal, Enhancer Elements, Genetic, Genome, Fungal, Saccharomyces cerevisiae, Saccharomyces cerevisiae Proteins, Telomerase, Telomere, Telomere-Binding Proteins
Added April 8, 2019
0 Communities
1 Members
0 Resources
MeSH Terms
Genomics and the making of yeast biodiversity.
Hittinger CT, Rokas A, Bai FY, Boekhout T, Gonçalves P, Jeffries TW, Kominek J, Lachance MA, Libkind D, Rosa CA, Sampaio JP, Kurtzman CP
(2015) Curr Opin Genet Dev 35: 100-9
MeSH Terms: Base Sequence, Biodiversity, Candida albicans, Genetic Variation, Genome, Fungal, Genomics, High-Throughput Nucleotide Sequencing, Saccharomyces cerevisiae
Added February 22, 2016
0 Communities
1 Members
0 Resources
8 MeSH Terms
New paradigms in sepsis: from prevention to protection of failing microcirculation.
Hawiger J, Veach RA, Zienkiewicz J
(2015) J Thromb Haemost 13: 1743-56
MeSH Terms: Animals, Genetic Predisposition to Disease, Genome, Bacterial, Genome, Fungal, Genome, Viral, Host-Pathogen Interactions, Humans, Inflammation Mediators, Microcirculation, Microvessels, Phenotype, Risk Factors, Sepsis, Signal Transduction, Treatment Outcome
Added October 4, 2015
0 Communities
1 Members
0 Resources
15 MeSH Terms
Examining the evolution of the regulatory circuit controlling secondary metabolism and development in the fungal genus Aspergillus.
Lind AL, Wisecaver JH, Smith TD, Feng X, Calvo AM, Rokas A
(2015) PLoS Genet 11: e1005096
MeSH Terms: Aspergillus, Biological Evolution, Evolution, Molecular, Genome, Fungal, Metabolic Networks and Pathways
Added February 22, 2016
0 Communities
2 Members
0 Resources
5 MeSH Terms
The evolution of fungal metabolic pathways.
Wisecaver JH, Slot JC, Rokas A
(2014) PLoS Genet 10: e1004816
MeSH Terms: Ascomycota, Evolution, Molecular, Gene Duplication, Gene Regulatory Networks, Gene Transfer, Horizontal, Genes, Fungal, Genome, Fungal, Metabolic Networks and Pathways, Multigene Family, Phylogeny
Added February 19, 2015
0 Communities
1 Members
0 Resources
10 MeSH Terms
Evaluating rare amino acid substitutions (RGC_CAMs) in a yeast model clade.
Polzin K, Rokas A
(2014) PLoS One 9: e92213
MeSH Terms: Amino Acid Sequence, Amino Acid Substitution, Genome, Fungal, Models, Biological, Molecular Sequence Data, Phylogeny, Saccharomyces cerevisiae, Saccharomyces cerevisiae Proteins
Added May 30, 2014
0 Communities
1 Members
0 Resources
8 MeSH Terms