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The publication data currently available has been vetted by Vanderbilt faculty, staff, administrators and trainees. The data itself is retrieved directly from NCBI's PubMed and is automatically updated on a weekly basis to ensure accuracy and completeness.

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Results: 1 to 10 of 991

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Contextualizing genetic risk score for disease screening and rare variant discovery.
Zhou D, Yu D, Scharf JM, Mathews CA, McGrath L, Cook E, Lee SH, Davis LK, Gamazon ER
(2021) Nat Commun 12: 4418
MeSH Terms: Clinical Decision-Making, Datasets as Topic, Genetic Predisposition to Disease, Genetic Testing, Genome-Wide Association Study, Humans, Models, Genetic, Multifactorial Inheritance, Polymorphism, Single Nucleotide, Risk Factors, Software, Whole Genome Sequencing
Added July 22, 2021
0 Communities
1 Members
0 Resources
12 MeSH Terms
An integrative systems-based analysis of substance use: eQTL-informed gene-based tests, gene networks, and biological mechanisms.
Gerring ZF, Vargas AM, Gamazon ER, Derks EM
(2021) Am J Med Genet B Neuropsychiatr Genet 186: 162-172
MeSH Terms: Gene Expression Profiling, Gene Regulatory Networks, Genetic Predisposition to Disease, Genetic Testing, Genome-Wide Association Study, Humans, Phenotype, Polymorphism, Single Nucleotide, Quantitative Trait Loci, Substance-Related Disorders
Added December 30, 2020
0 Communities
1 Members
0 Resources
10 MeSH Terms
Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples.
Bailey MH, Meyerson WU, Dursi LJ, Wang LB, Dong G, Liang WW, Weerasinghe A, Li S, Li Y, Kelso S, MC3 Working Group, PCAWG novel somatic mutation calling methods working group, Saksena G, Ellrott K, Wendl MC, Wheeler DA, Getz G, Simpson JT, Gerstein MB, Ding L, PCAWG Consortium
(2020) Nat Commun 11: 4748
MeSH Terms: Base Composition, DNA, Intergenic, Databases, Genetic, Exome, Exons, Genome, Human, Humans, Mutation, Neoplasms, Retrospective Studies, Whole Exome Sequencing, Whole Genome Sequencing
Added April 27, 2021
0 Communities
1 Members
0 Resources
MeSH Terms
The GTEx Consortium atlas of genetic regulatory effects across human tissues.
GTEx Consortium
(2020) Science 369: 1318-1330
MeSH Terms: Datasets as Topic, Disease, Female, Gene Expression Regulation, Genome-Wide Association Study, Humans, Male, Organ Specificity, Quantitative Trait Loci, Sequence Analysis, RNA
Added September 15, 2020
0 Communities
1 Members
0 Resources
10 MeSH Terms
The impact of sex on gene expression across human tissues.
Oliva M, Muñoz-Aguirre M, Kim-Hellmuth S, Wucher V, Gewirtz ADH, Cotter DJ, Parsana P, Kasela S, Balliu B, Viñuela A, Castel SE, Mohammadi P, Aguet F, Zou Y, Khramtsova EA, Skol AD, Garrido-Martín D, Reverter F, Brown A, Evans P, Gamazon ER, Payne A, Bonazzola R, Barbeira AN, Hamel AR, Martinez-Perez A, Soria JM, GTEx Consortium, Pierce BL, Stephens M, Eskin E, Dermitzakis ET, Segrè AV, Im HK, Engelhardt BE, Ardlie KG, Montgomery SB, Battle AJ, Lappalainen T, Guigó R, Stranger BE
(2020) Science 369:
MeSH Terms: Chromosomes, Human, X, Disease, Epigenesis, Genetic, Female, Gene Expression, Gene Expression Regulation, Genetic Variation, Genome-Wide Association Study, Humans, Male, Organ Specificity, Promoter Regions, Genetic, Quantitative Trait Loci, Sex Characteristics, Sex Factors
Added September 15, 2020
0 Communities
1 Members
0 Resources
15 MeSH Terms
A vast resource of allelic expression data spanning human tissues.
Castel SE, Aguet F, Mohammadi P, GTEx Consortium, Ardlie KG, Lappalainen T
(2020) Genome Biol 21: 234
MeSH Terms: Alleles, Gene Expression, Genome, Human, Haplotypes, Humans, Polymorphism, Single Nucleotide, Sequence Analysis, RNA
Added September 15, 2020
0 Communities
1 Members
0 Resources
7 MeSH Terms
A Transcriptome-Wide Association Study Identifies Candidate Susceptibility Genes for Pancreatic Cancer Risk.
Liu D, Zhou D, Sun Y, Zhu J, Ghoneim D, Wu C, Yao Q, Gamazon ER, Cox NJ, Wu L
(2020) Cancer Res 80: 4346-4354
MeSH Terms: Age Factors, Case-Control Studies, European Continental Ancestry Group, Female, Gene Expression Regulation, Neoplastic, Genetic Predisposition to Disease, Genome-Wide Association Study, Humans, Male, Models, Genetic, Pancreatic Neoplasms, Polymorphism, Single Nucleotide
Added September 15, 2020
0 Communities
1 Members
0 Resources
12 MeSH Terms
Quantitative Analysis of Adenosine-to-Inosine RNA Editing.
Malik TN, Cartailler JP, Emeson RB
(2021) Methods Mol Biol 2181: 97-111
MeSH Terms: Adenosine, DNA, Complementary, Genome, Human, High-Throughput Nucleotide Sequencing, Humans, Inosine, RNA Editing, Transcriptome
Added October 29, 2020
0 Communities
1 Members
0 Resources
8 MeSH Terms
An analysis of genetically regulated gene expression across multiple tissues implicates novel gene candidates in Alzheimer's disease.
Gerring ZF, Lupton MK, Edey D, Gamazon ER, Derks EM
(2020) Alzheimers Res Ther 12: 43
MeSH Terms: Alzheimer Disease, Gene Expression, Genome-Wide Association Study, Humans, Polymorphism, Single Nucleotide, Quantitative Trait Loci
Added April 18, 2020
0 Communities
1 Members
0 Resources
6 MeSH Terms
Systematic genome editing of the genes spanning an entire chromosome by CRISPR/Cas9 in a vertebrate-zebrafish (Danio rerio).
Gong Y, Yang B, Chen W
(2020) Sci China Life Sci 63: 1096-1097
MeSH Terms: Animals, Animals, Genetically Modified, Base Sequence, CRISPR-Associated Protein 9, CRISPR-Cas Systems, Chromosomes, Databases, Genetic, Gene Editing, Genome, Transcriptome, Zebrafish, Zebrafish Proteins
Added September 14, 2021
0 Communities
1 Members
0 Resources
MeSH Terms