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The publication data currently available has been vetted by Vanderbilt faculty, staff, administrators and trainees. The data itself is retrieved directly from NCBI's PubMed and is automatically updated on a weekly basis to ensure accuracy and completeness.

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Results: 1 to 10 of 10

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Systems-level network modeling of Small Cell Lung Cancer subtypes identifies master regulators and destabilizers.
Wooten DJ, Groves SM, Tyson DR, Liu Q, Lim JS, Albert R, Lopez CF, Sage J, Quaranta V
(2019) PLoS Comput Biol 15: e1007343
MeSH Terms: Algorithms, Animals, Basic Helix-Loop-Helix Transcription Factors, Bayes Theorem, Cell Line, Tumor, Cluster Analysis, Databases, Genetic, Drug Resistance, Neoplasm, Gene Expression, Gene Expression Regulation, Neoplastic, Gene Ontology, Gene Regulatory Networks, Humans, Mice, Models, Theoretical, Small Cell Lung Carcinoma, Systems Analysis, Transcription Factors
Added March 30, 2020
0 Communities
1 Members
0 Resources
MeSH Terms
p73 regulates ependymal planar cell polarity by modulating actin and microtubule cytoskeleton.
Fuertes-Alvarez S, Maeso-Alonso L, Villoch-Fernandez J, Wildung M, Martin-Lopez M, Marshall C, Villena-Cortes AJ, Diez-Prieto I, Pietenpol JA, Tissir F, Lizé M, Marques MM, Marin MC
(2018) Cell Death Dis 9: 1183
MeSH Terms: Animals, Carrier Proteins, Cell Polarity, Cilia, Cytoskeleton, Ependyma, Female, Frizzled Receptors, Gene Expression Regulation, Gene Ontology, HCT116 Cells, Humans, Male, Membrane Proteins, Mice, Mice, Inbred C57BL, Mice, Knockout, Microtubules, Molecular Sequence Annotation, Nerve Tissue Proteins, Nonmuscle Myosin Type IIA, Pluripotent Stem Cells, Signal Transduction, Tumor Protein p73
Added March 27, 2019
0 Communities
1 Members
0 Resources
24 MeSH Terms
Dynamics of Zebrafish Heart Regeneration Using an HPLC-ESI-MS/MS Approach.
Ma D, Tu C, Sheng Q, Yang Y, Kan Z, Guo Y, Shyr Y, Scott IC, Lou X
(2018) J Proteome Res 17: 1300-1308
MeSH Terms: Animals, Chromatography, High Pressure Liquid, Fish Proteins, Gene Ontology, Heart Injuries, Heart Ventricles, Metabolic Networks and Pathways, Molecular Sequence Annotation, Myocardium, Proteomics, Real-Time Polymerase Chain Reaction, Regeneration, Spectrometry, Mass, Electrospray Ionization, Tumor Suppressor Protein p53, Zebrafish
Added April 3, 2018
0 Communities
1 Members
0 Resources
15 MeSH Terms
Integrated molecular analysis reveals complex interactions between genomic and epigenomic alterations in esophageal adenocarcinomas.
Peng D, Guo Y, Chen H, Zhao S, Washington K, Hu T, Shyr Y, El-Rifai W
(2017) Sci Rep 7: 40729
MeSH Terms: Adenocarcinoma, Cell Line, Tumor, Comparative Genomic Hybridization, Computational Biology, DNA Copy Number Variations, DNA Methylation, Epigenesis, Genetic, Epigenomics, Esophageal Neoplasms, Gene Expression Profiling, Gene Expression Regulation, Neoplastic, Gene Ontology, Gene Regulatory Networks, Genomics, Humans
Added April 18, 2017
0 Communities
1 Members
0 Resources
15 MeSH Terms
Threshold-Dependent Cooperativity of Pdx1 and Oc1 in Pancreatic Progenitors Establishes Competency for Endocrine Differentiation and β-Cell Function.
Henley KD, Stanescu DE, Kropp PA, Wright CVE, Won KJ, Stoffers DA, Gannon M
(2016) Cell Rep 15: 2637-2650
MeSH Terms: Animals, Basic Helix-Loop-Helix Transcription Factors, Cell Count, Cell Differentiation, Embryo, Mammalian, Gene Dosage, Gene Expression Regulation, Developmental, Gene Ontology, Gene Regulatory Networks, Glucose, Hepatocyte Nuclear Factor 6, Heterozygote, Homeodomain Proteins, Homeostasis, Insulin-Secreting Cells, Mice, Multigene Family, Nerve Tissue Proteins, Stem Cells, Trans-Activators, Weaning
Added July 5, 2016
1 Communities
2 Members
0 Resources
21 MeSH Terms
Histology-directed and imaging mass spectrometry: An emerging technology in ectopic calcification.
Taverna D, Boraldi F, De Santis G, Caprioli RM, Quaglino D
(2015) Bone 74: 83-94
MeSH Terms: Adolescent, Calcification, Physiologic, Calcinosis, Diagnostic Imaging, Female, Gene Ontology, Humans, Middle Aged, Phenotype, Principal Component Analysis, Protein Interaction Maps, Proteins, Pseudoxanthoma Elasticum, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
Added February 12, 2015
1 Communities
1 Members
0 Resources
14 MeSH Terms
Genome-wide DNA methylation in neonates exposed to maternal depression, anxiety, or SSRI medication during pregnancy.
Non AL, Binder AM, Kubzansky LD, Michels KB
(2014) Epigenetics 9: 964-72
MeSH Terms: Antidepressive Agents, Anxiety, Case-Control Studies, Cell Division, Cohort Studies, CpG Islands, DNA Methylation, Depression, Female, Fetal Blood, Gene Expression Regulation, Gene Ontology, Genome, Human, Humans, Infant, Newborn, Male, Pregnancy, Pregnancy Complications, Prenatal Exposure Delayed Effects, Protein Biosynthesis, Serotonin Uptake Inhibitors
Added January 20, 2015
0 Communities
1 Members
0 Resources
21 MeSH Terms
Global analysis reveals the complexity of the human glomerular extracellular matrix.
Lennon R, Byron A, Humphries JD, Randles MJ, Carisey A, Murphy S, Knight D, Brenchley PE, Zent R, Humphries MJ
(2014) J Am Soc Nephrol 25: 939-51
MeSH Terms: Adult, Collagen Type VI, Extracellular Matrix Proteins, Gene Ontology, Humans, Kidney Glomerulus, Lipocalins, Male, Mass Spectrometry, Middle Aged, Protein Interaction Maps, Proteome
Added February 25, 2014
1 Communities
1 Members
0 Resources
12 MeSH Terms
Exploring drug-target interaction networks of illicit drugs.
Atreya RV, Sun J, Zhao Z
(2013) BMC Genomics 14 Suppl 4: S1
MeSH Terms: Analgesics, Central Nervous System Depressants, Central Nervous System Stimulants, Computational Biology, Databases, Pharmaceutical, Gene Ontology, Genes, Humans, Illicit Drugs, Proteins, Steroids, Substance-Related Disorders, United States
Added May 27, 2014
0 Communities
1 Members
0 Resources
13 MeSH Terms
Association signals unveiled by a comprehensive gene set enrichment analysis of dental caries genome-wide association studies.
Wang Q, Jia P, Cuenco KT, Zeng Z, Feingold E, Marazita ML, Wang L, Zhao Z
(2013) PLoS One 8: e72653
MeSH Terms: Child, Child, Preschool, Computational Biology, Databases, Genetic, Dental Caries, Female, Gene Ontology, Genome-Wide Association Study, Humans, Male, Molecular Sequence Annotation, Polymorphism, Single Nucleotide
Added March 7, 2014
0 Communities
1 Members
0 Resources
12 MeSH Terms