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The publication data currently available has been vetted by Vanderbilt faculty, staff, administrators and trainees. The data itself is retrieved directly from NCBI's PubMed and is automatically updated on a weekly basis to ensure accuracy and completeness.

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Results: 1 to 10 of 71

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Identification of Virulence Determinants During Host-Pathogen Interaction Using Tn-Seq Technology.
Peek CT, Ibberson CB, Cassat JE
(2020) Methods Mol Biol 2069: 155-175
MeSH Terms: Animals, DNA Transposable Elements, Gene Library, High-Throughput Nucleotide Sequencing, Mice, Staphylococcal Infections, Staphylococcus aureus, Virulence Factors
Added March 25, 2020
0 Communities
1 Members
0 Resources
8 MeSH Terms
Toward Cell Type-Specific In Vivo Dual RNA-Seq.
Frönicke L, Bronner DN, Byndloss MX, McLaughlin B, Bäumler AJ, Westermann AJ
(2018) Methods Enzymol 612: 505-522
MeSH Terms: Gene Library, RNA, Bacterial, Salmonella typhimurium, Sequence Analysis, RNA
Added March 30, 2020
0 Communities
1 Members
0 Resources
MeSH Terms
End Sequence Analysis Toolkit (ESAT) expands the extractable information from single-cell RNA-seq data.
Derr A, Yang C, Zilionis R, Sergushichev A, Blodgett DM, Redick S, Bortell R, Luban J, Harlan DM, Kadener S, Greiner DL, Klein A, Artyomov MN, Garber M
(2016) Genome Res 26: 1397-1410
MeSH Terms: Animals, Cells, Cultured, Dendritic Cells, Gene Library, Islets of Langerhans, Microfluidics, Rats, Sequence Analysis, RNA, Single-Cell Analysis, Transcriptome
Added October 12, 2016
0 Communities
1 Members
0 Resources
10 MeSH Terms
Joint mouse-human phenome-wide association to test gene function and disease risk.
Wang X, Pandey AK, Mulligan MK, Williams EG, Mozhui K, Li Z, Jovaisaite V, Quarles LD, Xiao Z, Huang J, Capra JA, Chen Z, Taylor WL, Bastarache L, Niu X, Pollard KS, Ciobanu DC, Reznik AO, Tishkov AV, Zhulin IB, Peng J, Nelson SF, Denny JC, Auwerx J, Lu L, Williams RW
(2016) Nat Commun 7: 10464
MeSH Terms: Animals, Bone Density, Caenorhabditis elegans, Fumarate Hydratase, Gene Expression Regulation, Gene Library, Genetic Predisposition to Disease, Genetic Variation, Genome-Wide Association Study, Genomics, Humans, Mice, Mice, Inbred DBA, Quantitative Trait Loci
Added April 29, 2016
1 Communities
2 Members
0 Resources
14 MeSH Terms
RNAseq by Total RNA Library Identifies Additional RNAs Compared to Poly(A) RNA Library.
Guo Y, Zhao S, Sheng Q, Guo M, Lehmann B, Pietenpol J, Samuels DC, Shyr Y
(2015) Biomed Res Int 2015: 862130
MeSH Terms: Gene Expression Profiling, Gene Library, Humans, Open Reading Frames, Poly A, RNA, RNA, Ribosomal, Sequence Analysis, RNA
Added February 15, 2016
1 Communities
3 Members
0 Resources
8 MeSH Terms
A Synthetic Lethal Screen Identifies DNA Repair Pathways that Sensitize Cancer Cells to Combined ATR Inhibition and Cisplatin Treatments.
Mohni KN, Thompson PS, Luzwick JW, Glick GG, Pendleton CS, Lehmann BD, Pietenpol JA, Cortez D
(2015) PLoS One 10: e0125482
MeSH Terms: Antineoplastic Agents, Antineoplastic Combined Chemotherapy Protocols, Ataxia Telangiectasia Mutated Proteins, Cell Line, Tumor, Cell Survival, Cisplatin, DNA Repair, DNA-Directed DNA Polymerase, Drug Resistance, Neoplasm, Drug Synergism, Gene Library, HCT116 Cells, Humans, Intracellular Signaling Peptides and Proteins, Pyrazines, RNA, Small Interfering, Sulfones, Tumor Suppressor p53-Binding Protein 1
Added February 4, 2016
1 Communities
2 Members
0 Resources
18 MeSH Terms
Three-stage quality control strategies for DNA re-sequencing data.
Guo Y, Ye F, Sheng Q, Clark T, Samuels DC
(2014) Brief Bioinform 15: 879-89
MeSH Terms: Computational Biology, DNA, Gene Library, High-Throughput Nucleotide Sequencing, Humans, Neoplasms, Polymorphism, Single Nucleotide, Quality Control, Sequence Alignment, Sequence Analysis, DNA
Added December 12, 2013
0 Communities
1 Members
0 Resources
10 MeSH Terms
Powerful genetic resource for the study of methicillin-resistant Staphylococcus aureus.
Hammer ND, Skaar EP
(2013) mBio 4:
MeSH Terms: Gene Knockout Techniques, Gene Library, Genetics, Microbial, Humans, Methicillin-Resistant Staphylococcus aureus, Mutagenesis, Insertional
Added February 11, 2016
0 Communities
1 Members
0 Resources
6 MeSH Terms
Transcriptome of the adult female malaria mosquito vector Anopheles albimanus.
Martínez-Barnetche J, Gómez-Barreto RE, Ovilla-Muñoz M, Téllez-Sosa J, García López DE, Dinglasan RR, Ubaida Mohien C, MacCallum RM, Redmond SN, Gibbons JG, Rokas A, Machado CA, Cazares-Raga FE, González-Cerón L, Hernández-Martínez S, Rodríguez López MH
(2012) BMC Genomics 13: 207
MeSH Terms: Animals, Anopheles, Chromosome Mapping, Databases, Genetic, Expressed Sequence Tags, Female, Gene Library, Genome, Host-Parasite Interactions, Insect Vectors, Plasmodium, Proteome, Sequence Analysis, DNA, Transcriptome
Added August 16, 2012
1 Communities
0 Members
0 Resources
14 MeSH Terms
Identification and expression profiling of blood-brain barrier membrane proteins.
Agarwal N, Lippmann ES, Shusta EV
(2010) J Neurochem 112: 625-35
MeSH Terms: Animals, Blood-Brain Barrier, Cattle, Cell Line, Transformed, Cloning, Molecular, Endothelium, Vascular, Gene Expression Profiling, Gene Expression Regulation, Gene Library, Humans, Membrane Proteins, Microdissection, Microvessels, Molecular Sequence Data, Oligonucleotide Array Sequence Analysis, RNA, Messenger, Transfection
Added August 19, 2015
0 Communities
1 Members
0 Resources
17 MeSH Terms