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The publication data currently available has been vetted by Vanderbilt faculty, staff, administrators and trainees. The data itself is retrieved directly from NCBI's PubMed and is automatically updated on a weekly basis to ensure accuracy and completeness.

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Results: 1 to 10 of 89

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Protection of abasic sites during DNA replication by a stable thiazolidine protein-DNA cross-link.
Thompson PS, Amidon KM, Mohni KN, Cortez D, Eichman BF
(2019) Nat Struct Mol Biol 26: 613-618
MeSH Terms: Crystallography, X-Ray, DNA Repair, DNA Replication, DNA, Single-Stranded, DNA-Binding Proteins, Escherichia coli, Escherichia coli Proteins, Humans, Molecular Docking Simulation, Protein Conformation, Thiazolidines
Added August 26, 2019
0 Communities
1 Members
0 Resources
11 MeSH Terms
Cuts Both Ways: Proteases Modulate Virulence of Enterohemorrhagic .
Palmer LD, Skaar EP
(2019) mBio 10:
MeSH Terms: Enterohemorrhagic Escherichia coli, Escherichia coli Proteins, Humans, Microbiota, Peptide Hydrolases, Virulence
Added April 2, 2019
0 Communities
1 Members
0 Resources
MeSH Terms
Micro-Data-Independent Acquisition for High-Throughput Proteomics and Sensitive Peptide Mass Spectrum Identification.
Heaven MR, Cobbs AL, Nei YW, Gutierrez DB, Herren AW, Gunawardena HP, Caprioli RM, Norris JL
(2018) Anal Chem 90: 8905-8911
MeSH Terms: Algorithms, Chromatography, Liquid, Databases, Protein, Escherichia coli, Escherichia coli Proteins, HeLa Cells, High-Throughput Screening Assays, Humans, Peptides, Proteome, Proteomics, Software, Tandem Mass Spectrometry, Workflow
Added August 27, 2018
0 Communities
2 Members
0 Resources
14 MeSH Terms
Crystal structure of an assembly intermediate of respiratory Complex II.
Sharma P, Maklashina E, Cecchini G, Iverson TM
(2018) Nat Commun 9: 274
MeSH Terms: Crystallography, X-Ray, Electron Transport Complex II, Escherichia coli, Escherichia coli Proteins, Flavin-Adenine Dinucleotide, Oxidoreductases
Added April 1, 2019
0 Communities
1 Members
0 Resources
MeSH Terms
New crystal forms of the integral membrane Escherichia coli quinol:fumarate reductase suggest that ligands control domain movement.
Starbird CA, Tomasiak TM, Singh PK, Yankovskaya V, Maklashina E, Eisenbach M, Cecchini G, Iverson TM
(2018) J Struct Biol 202: 100-104
MeSH Terms: Binding Sites, Catalytic Domain, Crystallography, Crystallography, X-Ray, Escherichia coli Proteins, Ligands, Membrane Proteins, Models, Molecular, Oxidoreductases, Protein Domains, Rotation
Added April 1, 2019
0 Communities
1 Members
0 Resources
11 MeSH Terms
Dodecyl-β-melibioside Detergent Micelles as a Medium for Membrane Proteins.
Hutchison JM, Lu Z, Li GC, Travis B, Mittal R, Deatherage CL, Sanders CR
(2017) Biochemistry 56: 5481-5484
MeSH Terms: Amyloid beta-Protein Precursor, Detergents, Diacylglycerol Kinase, Disaccharides, Dynamic Light Scattering, Enzyme Stability, Escherichia coli Proteins, Glucosides, Glycolipids, Hot Temperature, Humans, Micelles, Myelin Proteins, Nuclear Magnetic Resonance, Biomolecular, Particle Size, Peptide Fragments, Protein Interaction Domains and Motifs, Protein Stability, Receptor, Notch1
Added November 21, 2018
0 Communities
1 Members
0 Resources
MeSH Terms
Structural and biochemical analyses reveal insights into covalent flavinylation of the Complex II homolog quinol:fumarate reductase.
Starbird CA, Maklashina E, Sharma P, Qualls-Histed S, Cecchini G, Iverson TM
(2017) J Biol Chem 292: 12921-12933
MeSH Terms: Amino Acid Substitution, Biocatalysis, Crystallography, X-Ray, Enzyme Stability, Escherichia coli, Escherichia coli Proteins, Flavin-Adenine Dinucleotide, Gene Deletion, Glutamic Acid, Hot Temperature, Models, Molecular, Molecular Docking Simulation, Mutagenesis, Site-Directed, Mutation, Oxidoreductases, Protein Conformation, Protein Denaturation, Protein Interaction Domains and Motifs, Protein Multimerization, Protein Processing, Post-Translational, Protein Subunits, Recombinant Proteins, Structural Homology, Protein, Succinate Dehydrogenase
Added April 1, 2019
0 Communities
1 Members
0 Resources
MeSH Terms
Purine Biosynthesis Metabolically Constrains Intracellular Survival of Uropathogenic Escherichia coli.
Shaffer CL, Zhang EW, Dudley AG, Dixon BREA, Guckes KR, Breland EJ, Floyd KA, Casella DP, Algood HMS, Clayton DB, Hadjifrangiskou M
(2017) Infect Immun 85:
MeSH Terms: Animals, Cytoplasm, Epithelial Cells, Escherichia coli Infections, Escherichia coli Proteins, Female, Humans, Mice, Mice, Inbred C3H, Purines, Urinary Bladder, Urinary Tract Infections, Uropathogenic Escherichia coli, Virulence
Added November 3, 2016
0 Communities
1 Members
0 Resources
14 MeSH Terms
Dynamic Evolution of Nitric Oxide Detoxifying Flavohemoglobins, a Family of Single-Protein Metabolic Modules in Bacteria and Eukaryotes.
Wisecaver JH, Alexander WG, King SB, Hittinger CT, Rokas A
(2016) Mol Biol Evol 33: 1979-87
MeSH Terms: Adaptation, Biological, Amino Acid Sequence, Bacteria, Bacterial Proteins, Biological Evolution, Computational Biology, Databases, Nucleic Acid, Dihydropteridine Reductase, Escherichia coli Proteins, Eukaryota, Evolution, Molecular, Fungi, Gene Duplication, Gene Transfer, Horizontal, Hemeproteins, NADH, NADPH Oxidoreductases, Nitric Oxide, Phylogeny
Added April 6, 2017
0 Communities
1 Members
0 Resources
18 MeSH Terms
Protonation-dependent conformational dynamics of the multidrug transporter EmrE.
Dastvan R, Fischer AW, Mishra S, Meiler J, Mchaourab HS
(2016) Proc Natl Acad Sci U S A 113: 1220-5
MeSH Terms: Antiporters, Electron Spin Resonance Spectroscopy, Escherichia coli Proteins, Models, Molecular, Protein Conformation, Protons, X-Ray Diffraction
Added February 5, 2016
1 Communities
1 Members
0 Resources
7 MeSH Terms