Other search tools

About this data

The publication data currently available has been vetted by Vanderbilt faculty, staff, administrators and trainees. The data itself is retrieved directly from NCBI's PubMed and is automatically updated on a weekly basis to ensure accuracy and completeness.

If you have any questions or comments, please contact us.

Results: 1 to 10 of 17

Publication Record

Connections

Comparative Molecular Analysis of Gastrointestinal Adenocarcinomas.
Liu Y, Sethi NS, Hinoue T, Schneider BG, Cherniack AD, Sanchez-Vega F, Seoane JA, Farshidfar F, Bowlby R, Islam M, Kim J, Chatila W, Akbani R, Kanchi RS, Rabkin CS, Willis JE, Wang KK, McCall SJ, Mishra L, Ojesina AI, Bullman S, Pedamallu CS, Lazar AJ, Sakai R, Cancer Genome Atlas Research Network, Thorsson V, Bass AJ, Laird PW
(2018) Cancer Cell 33: 721-735.e8
MeSH Terms: Adenocarcinoma, Aneuploidy, Chromosomal Instability, DNA Methylation, DNA Polymerase II, DNA-Binding Proteins, Epigenesis, Genetic, Female, Gastrointestinal Neoplasms, Gene Regulatory Networks, Heterogeneous-Nuclear Ribonucleoproteins, Humans, Male, Microsatellite Instability, MutL Protein Homolog 1, Mutation, Poly-ADP-Ribose Binding Proteins, Polymorphism, Single Nucleotide, Proto-Oncogene Proteins p21(ras), RNA-Binding Proteins, SOX9 Transcription Factor
Added October 30, 2019
0 Communities
1 Members
0 Resources
21 MeSH Terms
Preventing replication fork collapse to maintain genome integrity.
Cortez D
(2015) DNA Repair (Amst) 32: 149-157
MeSH Terms: Animals, DNA, DNA Damage, DNA Polymerase III, DNA Repair, DNA Replication, Gene Expression Regulation, Genomic Instability, Humans, Mice, Proliferating Cell Nuclear Antigen, Saccharomyces cerevisiae, Xenopus laevis
Added February 4, 2016
0 Communities
1 Members
0 Resources
13 MeSH Terms
Down-regulation of replication factor C-40 (RFC40) causes chromosomal missegregation in neonatal and hypertrophic adult rat cardiac myocytes.
Ata H, Shrestha D, Oka M, Ochi R, Jong CJ, Gebb S, Benjamin J, Schaffer S, Hobart HH, Downey J, McMurtry I, Gupte R
(2012) PLoS One 7: e39009
MeSH Terms: Animals, Animals, Newborn, Cardiomegaly, Cells, Cultured, Chromosomes, DNA Polymerase III, Down-Regulation, Immunohistochemistry, In Situ Hybridization, Fluorescence, Male, Myocardium, Rats, Rats, Sprague-Dawley, Real-Time Polymerase Chain Reaction, Replication Protein C
Added March 30, 2020
0 Communities
1 Members
0 Resources
MeSH Terms
Roles of the four DNA polymerases of the crenarchaeon Sulfolobus solfataricus and accessory proteins in DNA replication.
Choi JY, Eoff RL, Pence MG, Wang J, Martin MV, Kim EJ, Folkmann LM, Guengerich FP
(2011) J Biol Chem 286: 31180-93
MeSH Terms: Bacterial Proteins, DNA, DNA Damage, DNA Polymerase I, DNA Polymerase II, DNA Polymerase III, DNA Polymerase beta, DNA Replication, DNA-Directed DNA Polymerase, Sulfolobus solfataricus
Added March 7, 2014
0 Communities
2 Members
0 Resources
10 MeSH Terms
1,N2-Etheno-2'-deoxyguanosine adopts the syn conformation about the glycosyl bond when mismatched with deoxyadenosine.
Shanmugam G, Kozekov ID, Guengerich FP, Rizzo CJ, Stone MP
(2011) Chem Res Toxicol 24: 1071-9
MeSH Terms: Base Pair Mismatch, DNA Polymerase I, DNA Polymerase II, DNA Polymerase beta, Deoxyadenosines, Escherichia coli, Hydrogen Bonding, Hydrogen-Ion Concentration, Magnetic Resonance Spectroscopy, Oligodeoxyribonucleotides, Protons, Sulfolobus solfataricus, Transition Temperature
Added March 7, 2014
0 Communities
3 Members
0 Resources
13 MeSH Terms
DNA replication through G-quadruplex motifs is promoted by the Saccharomyces cerevisiae Pif1 DNA helicase.
Paeschke K, Capra JA, Zakian VA
(2011) Cell 145: 678-91
MeSH Terms: DNA Copy Number Variations, DNA Helicases, DNA Polymerase II, DNA Replication, G-Quadruplexes, S Phase, Saccharomyces cerevisiae, Saccharomyces cerevisiae Proteins
Added April 18, 2017
0 Communities
1 Members
0 Resources
8 MeSH Terms
Translesion synthesis across abasic lesions by human B-family and Y-family DNA polymerases α, δ, η, ι, κ, and REV1.
Choi JY, Lim S, Kim EJ, Jo A, Guengerich FP
(2010) J Mol Biol 404: 34-44
MeSH Terms: DNA, DNA Damage, DNA Polymerase I, DNA Polymerase III, DNA Repair, DNA Replication, DNA-Directed DNA Polymerase, Humans, Kinetics, Nuclear Proteins, Nucleotidyltransferases, Oligonucleotides, Proliferating Cell Nuclear Antigen
Added March 26, 2014
0 Communities
1 Members
0 Resources
13 MeSH Terms
A canonical promoter organization of the transcription machinery and its regulators in the Saccharomyces genome.
Venters BJ, Pugh BF
(2009) Genome Res 19: 360-71
MeSH Terms: Base Sequence, Binding Sites, Chromosome Mapping, DNA Polymerase II, Genome, Fungal, Models, Biological, Nucleosomes, Promoter Regions, Genetic, RNA, Antisense, Saccharomyces cerevisiae, TATA-Box Binding Protein, Transcription Factor TFIIB, Transcription Factors, Transcription, Genetic, Transcriptional Activation
Added March 5, 2014
0 Communities
1 Members
0 Resources
15 MeSH Terms
Cell cycle-dependent phosphorylation of the DNA polymerase epsilon subunit, Dpb2, by the Cdc28 cyclin-dependent protein kinase.
Kesti T, McDonald WH, Yates JR, Wittenberg C
(2004) J Biol Chem 279: 14245-55
MeSH Terms: CDC28 Protein Kinase, S cerevisiae, Cell Cycle, DNA Polymerase II, DNA Replication, Mutation, Phenotype, Phosphorylation, Saccharomycetales
Added March 20, 2014
0 Communities
1 Members
0 Resources
8 MeSH Terms
Mot1p is essential for TBP recruitment to selected promoters during in vivo gene activation.
Andrau JC, Van Oevelen CJ, Van Teeffelen HA, Weil PA, Holstege FC, Timmers HT
(2002) EMBO J 21: 5173-83
MeSH Terms: Adenosine Triphosphatases, DNA Helicases, DNA Polymerase II, Gene Expression Regulation, Fungal, Glucose Transport Proteins, Facilitative, Membrane Proteins, Monosaccharide Transport Proteins, Oligonucleotide Array Sequence Analysis, Saccharomyces cerevisiae, Saccharomyces cerevisiae Proteins, TATA-Binding Protein Associated Factors, TATA-Box Binding Protein, Transcriptional Activation
Added March 5, 2014
0 Communities
1 Members
0 Resources
13 MeSH Terms