Other search tools

About this data

The publication data currently available has been vetted by Vanderbilt faculty, staff, administrators and trainees. The data itself is retrieved directly from NCBI's PubMed and is automatically updated on a weekly basis to ensure accuracy and completeness.

If you have any questions or comments, please contact us.

Results: 1 to 10 of 80

Publication Record

Connections

DNA methylation of HPA-axis genes and the onset of major depressive disorder in adolescent girls: a prospective analysis.
Humphreys KL, Moore SR, Davis EG, MacIsaac JL, Lin DTS, Kobor MS, Gotlib IH
(2019) Transl Psychiatry 9: 245
MeSH Terms: Adolescent, CpG Islands, DNA Methylation, Depressive Disorder, Major, Epigenesis, Genetic, Female, Genotype, Humans, Hypothalamo-Hypophyseal System, Pituitary-Adrenal System, Polymorphism, Single Nucleotide, Proportional Hazards Models, Prospective Studies, Receptors, Corticotropin-Releasing Hormone, Receptors, Glucocorticoid
Added March 3, 2020
0 Communities
1 Members
0 Resources
15 MeSH Terms
Machine learning selected smoking-associated DNA methylation signatures that predict HIV prognosis and mortality.
Zhang X, Hu Y, Aouizerat BE, Peng G, Marconi VC, Corley MJ, Hulgan T, Bryant KJ, Zhao H, Krystal JH, Justice AC, Xu K
(2018) Clin Epigenetics 10: 155
MeSH Terms: Adult, CpG Islands, DNA Methylation, Epigenesis, Genetic, Female, Frailty, Genome-Wide Association Study, HIV Infections, Humans, Machine Learning, Male, Middle Aged, Mortality, Prognosis, Signal Transduction, Smoking
Added December 11, 2019
0 Communities
1 Members
0 Resources
MeSH Terms
Cell-of-Origin Patterns Dominate the Molecular Classification of 10,000 Tumors from 33 Types of Cancer.
Hoadley KA, Yau C, Hinoue T, Wolf DM, Lazar AJ, Drill E, Shen R, Taylor AM, Cherniack AD, Thorsson V, Akbani R, Bowlby R, Wong CK, Wiznerowicz M, Sanchez-Vega F, Robertson AG, Schneider BG, Lawrence MS, Noushmehr H, Malta TM, Cancer Genome Atlas Network, Stuart JM, Benz CC, Laird PW
(2018) Cell 173: 291-304.e6
MeSH Terms: Aneuploidy, Chromosomes, Cluster Analysis, CpG Islands, DNA Methylation, Databases, Factual, Humans, MicroRNAs, Mutation, Neoplasm Proteins, Neoplasms, RNA, Messenger
Added October 30, 2019
0 Communities
1 Members
0 Resources
MeSH Terms
lncRNA Epigenetic Landscape Analysis Identifies EPIC1 as an Oncogenic lncRNA that Interacts with MYC and Promotes Cell-Cycle Progression in Cancer.
Wang Z, Yang B, Zhang M, Guo W, Wu Z, Wang Y, Jia L, Li S, Cancer Genome Atlas Research Network, Xie W, Yang D
(2018) Cancer Cell 33: 706-720.e9
MeSH Terms: Animals, Binding Sites, Breast Neoplasms, Cell Cycle, Cell Line, Tumor, CpG Islands, DNA Methylation, Epigenesis, Genetic, Female, Gene Expression Regulation, Neoplastic, Humans, Mice, Neoplasm Transplantation, Prognosis, Promoter Regions, Genetic, Proto-Oncogene Proteins c-myc, RNA, Long Noncoding, Up-Regulation
Added October 30, 2019
0 Communities
1 Members
0 Resources
MeSH Terms
Helicobacter pylori and its secreted immunomodulator VacA protect against anaphylaxis in experimental models of food allergy.
Kyburz A, Urban S, Altobelli A, Floess S, Huehn J, Cover TL, Müller A
(2017) Clin Exp Allergy 47: 1331-1341
MeSH Terms: Allergens, Anaphylaxis, Animals, Bacterial Proteins, CpG Islands, Cytokines, DNA Methylation, Disease Models, Animal, Food Hypersensitivity, Helicobacter pylori, Immunoglobulin E, Immunologic Factors, Male, Mice, Peanut Hypersensitivity, Spleen, T-Lymphocytes, Regulatory
Added March 21, 2018
0 Communities
1 Members
0 Resources
17 MeSH Terms
Comprehensive Molecular Characterization of Papillary Renal-Cell Carcinoma.
Cancer Genome Atlas Research Network, Linehan WM, Spellman PT, Ricketts CJ, Creighton CJ, Fei SS, Davis C, Wheeler DA, Murray BA, Schmidt L, Vocke CD, Peto M, Al Mamun AA, Shinbrot E, Sethi A, Brooks S, Rathmell WK, Brooks AN, Hoadley KA, Robertson AG, Brooks D, Bowlby R, Sadeghi S, Shen H, Weisenberger DJ, Bootwalla M, Baylin SB, Laird PW, Cherniack AD, Saksena G, Haake S, Li J, Liang H, Lu Y, Mills GB, Akbani R, Leiserson MD, Raphael BJ, Anur P, Bottaro D, Albiges L, Barnabas N, Choueiri TK, Czerniak B, Godwin AK, Hakimi AA, Ho TH, Hsieh J, Ittmann M, Kim WY, Krishnan B, Merino MJ, Mills Shaw KR, Reuter VE, Reznik E, Shelley CS, Shuch B, Signoretti S, Srinivasan R, Tamboli P, Thomas G, Tickoo S, Burnett K, Crain D, Gardner J, Lau K, Mallery D, Morris S, Paulauskis JD, Penny RJ, Shelton C, Shelton WT, Sherman M, Thompson E, Yena P, Avedon MT, Bowen J, Gastier-Foster JM, Gerken M, Leraas KM, Lichtenberg TM, Ramirez NC, Santos T, Wise L, Zmuda E, Demchok JA, Felau I, Hutter CM, Sheth M, Sofia HJ, Tarnuzzer R, Wang Z, Yang L, Zenklusen JC, Zhang J, Ayala B, Baboud J, Chudamani S, Liu J, Lolla L, Naresh R, Pihl T, Sun Q, Wan Y, Wu Y, Ally A, Balasundaram M, Balu S, Beroukhim R, Bodenheimer T, Buhay C, Butterfield YS, Carlsen R, Carter SL, Chao H, Chuah E, Clarke A, Covington KR, Dahdouli M, Dewal N, Dhalla N, Doddapaneni HV, Drummond JA, Gabriel SB, Gibbs RA, Guin R, Hale W, Hawes A, Hayes DN, Holt RA, Hoyle AP, Jefferys SR, Jones SJ, Jones CD, Kalra D, Kovar C, Lewis L, Li J, Ma Y, Marra MA, Mayo M, Meng S, Meyerson M, Mieczkowski PA, Moore RA, Morton D, Mose LE, Mungall AJ, Muzny D, Parker JS, Perou CM, Roach J, Schein JE, Schumacher SE, Shi Y, Simons JV, Sipahimalani P, Skelly T, Soloway MG, Sougnez C, Tam A, Tan D, Thiessen N, Veluvolu U, Wang M, Wilkerson MD, Wong T, Wu J, Xi L, Zhou J, Bedford J, Chen F, Fu Y, Gerstein M, Haussler D, Kasaian K, Lai P, Ling S, Radenbaugh A, Van Den Berg D, Weinstein JN, Zhu J, Albert M, Alexopoulou I, Andersen JJ, Auman JT, Bartlett J, Bastacky S, Bergsten J, Blute ML, Boice L, Bollag RJ, Boyd J, Castle E, Chen YB, Cheville JC, Curley E, Davies B, DeVolk A, Dhir R, Dike L, Eckman J, Engel J, Harr J, Hrebinko R, Huang M, Huelsenbeck-Dill L, Iacocca M, Jacobs B, Lobis M, Maranchie JK, McMeekin S, Myers J, Nelson J, Parfitt J, Parwani A, Petrelli N, Rabeno B, Roy S, Salner AL, Slaton J, Stanton M, Thompson RH, Thorne L, Tucker K, Weinberger PM, Winemiller C, Zach LA, Zuna R
(2016) N Engl J Med 374: 135-45
MeSH Terms: Carcinoma, Papillary, CpG Islands, DNA Methylation, Humans, Kidney Neoplasms, MicroRNAs, Mutation, NF-E2-Related Factor 2, Phenotype, Proto-Oncogene Proteins c-met, RNA, Messenger, RNA, Neoplasm, Sequence Analysis, RNA, Signal Transduction
Added August 8, 2016
1 Communities
2 Members
0 Resources
14 MeSH Terms
The effects of omega-3 polyunsaturated fatty acids and genetic variants on methylation levels of the interleukin-6 gene promoter.
Ma Y, Smith CE, Lai CQ, Irvin MR, Parnell LD, Lee YC, Pham LD, Aslibekyan S, Claas SA, Tsai MY, Borecki IB, Kabagambe EK, Ordovás JM, Absher DM, Arnett DK
(2016) Mol Nutr Food Res 60: 410-9
MeSH Terms: Adult, CpG Islands, DNA Methylation, Fatty Acids, Omega-3, Female, Humans, Interleukin-6, Male, Middle Aged, Polymorphism, Single Nucleotide, Promoter Regions, Genetic
Added February 18, 2016
0 Communities
1 Members
0 Resources
11 MeSH Terms
Intraindividual variation and short-term temporal trend in DNA methylation of human blood.
Shvetsov YB, Song MA, Cai Q, Tiirikainen M, Xiang YB, Shu XO, Yu H
(2015) Cancer Epidemiol Biomarkers Prev 24: 490-7
MeSH Terms: Adult, Aged, Blood Chemical Analysis, Cohort Studies, CpG Islands, DNA, DNA Methylation, Epigenomics, Female, Genome, Human, Humans, Middle Aged, Prospective Studies
Added April 3, 2018
0 Communities
1 Members
0 Resources
MeSH Terms
Clinically relevant genes and regulatory pathways associated with NRASQ61 mutations in melanoma through an integrative genomics approach.
Jiang W, Jia P, Hutchinson KE, Johnson DB, Sosman JA, Zhao Z
(2015) Oncotarget 6: 2496-508
MeSH Terms: CpG Islands, DNA Methylation, GTP Phosphohydrolases, Gene Expression Profiling, Gene Expression Regulation, Neoplastic, Gene Regulatory Networks, Genomics, Humans, Melanoma, Membrane Proteins, MicroRNAs, Models, Genetic, Mutation, Signal Transduction, Skin Neoplasms
Added February 13, 2015
0 Communities
1 Members
0 Resources
15 MeSH Terms
Modeling DNA methylation dynamics with approaches from phylogenetics.
Capra JA, Kostka D
(2014) Bioinformatics 30: i408-14
MeSH Terms: Animals, Base Sequence, Cell Differentiation, CpG Islands, DNA, DNA Methylation, Genomics, Markov Chains, Mice, Models, Genetic, Phylogeny
Added April 18, 2017
0 Communities
1 Members
0 Resources
11 MeSH Terms