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The publication data currently available has been vetted by Vanderbilt faculty, staff, administrators and trainees. The data itself is retrieved directly from NCBI's PubMed and is automatically updated on a weekly basis to ensure accuracy and completeness.

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Results: 1 to 10 of 265

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Over-Generalizing About GC (Hypoxia): Pitfalls of Limiting Breadth of Experimental Systems and Analyses in Framing Informatics Conclusions.
Boothby MR, Raybuck A, Cho SH, Stengel KR, Haase VH, Hiebert S, Li J
(2021) Front Immunol 12: 664249
MeSH Terms: Animals, B-Lymphocytes, Biomarkers, Computational Biology, Energy Metabolism, Gene Expression Profiling, Gene Expression Regulation, Germinal Center, Humans, Hypoxia, Immunomodulation, Mice, Transgenic
Added May 28, 2021
0 Communities
1 Members
0 Resources
12 MeSH Terms
Linking 24-h urines to clinical phenotypes: what alternatives does the future bring?
Sui W, Hsi RS
(2020) Curr Opin Urol 30: 177-182
MeSH Terms: Biomarkers, Computational Biology, Humans, Nephrolithiasis, Phenotype, Risk Assessment, Urinalysis
Added July 2, 2021
0 Communities
1 Members
0 Resources
MeSH Terms
Federating Structural Models and Data: Outcomes from A Workshop on Archiving Integrative Structures.
Berman HM, Adams PD, Bonvin AA, Burley SK, Carragher B, Chiu W, DiMaio F, Ferrin TE, Gabanyi MJ, Goddard TD, Griffin PR, Haas J, Hanke CA, Hoch JC, Hummer G, Kurisu G, Lawson CL, Leitner A, Markley JL, Meiler J, Montelione GT, Phillips GN, Prisner T, Rappsilber J, Schriemer DC, Schwede T, Seidel CAM, Strutzenberg TS, Svergun DI, Tajkhorshid E, Trewhella J, Vallat B, Velankar S, Vuister GW, Webb B, Westbrook JD, White KL, Sali A
(2019) Structure 27: 1745-1759
MeSH Terms: Computational Biology, Crystallography, X-Ray, Databases, Protein, Magnetic Resonance Spectroscopy, Models, Molecular, Protein Conformation, Proteins
Added March 21, 2020
0 Communities
1 Members
0 Resources
7 MeSH Terms
Precision Medicine in Pancreatic Disease-Knowledge Gaps and Research Opportunities: Summary of a National Institute of Diabetes and Digestive and Kidney Diseases Workshop.
Lowe ME, Andersen DK, Caprioli RM, Choudhary J, Cruz-Monserrate Z, Dasyam AK, Forsmark CE, Gorelick FS, Gray JW, Haupt M, Kelly KA, Olive KP, Plevritis SK, Rappaport N, Roth HR, Steen H, Swamidass SJ, Tirkes T, Uc A, Veselkov K, Whitcomb DC, Habtezion A
(2019) Pancreas 48: 1250-1258
MeSH Terms: Biomarkers, Biomedical Research, Computational Biology, Datasets as Topic, Deep Learning, Humans, Metabolomics, Pancreatic Diseases, Precision Medicine, Research
Added March 3, 2020
0 Communities
1 Members
0 Resources
10 MeSH Terms
Mapping eGFR loci to the renal transcriptome and phenome in the VA Million Veteran Program.
Hellwege JN, Velez Edwards DR, Giri A, Qiu C, Park J, Torstenson ES, Keaton JM, Wilson OD, Robinson-Cohen C, Chung CP, Roumie CL, Klarin D, Damrauer SM, DuVall SL, Siew E, Akwo EA, Wuttke M, Gorski M, Li M, Li Y, Gaziano JM, Wilson PWF, Tsao PS, O'Donnell CJ, Kovesdy CP, Pattaro C, Köttgen A, Susztak K, Edwards TL, Hung AM
(2019) Nat Commun 10: 3842
MeSH Terms: Adult, Aged, Animals, Cell Line, Chromosome Mapping, Cohort Studies, Computational Biology, Female, Genetic Loci, Genetic Predisposition to Disease, Genome-Wide Association Study, Glomerular Filtration Rate, Humans, Kidney, Male, Mice, Middle Aged, Polymorphism, Single Nucleotide, RNA-Seq, Renal Insufficiency, Chronic, Transcriptome, United States, United States Department of Veterans Affairs, Veterans
Added March 3, 2020
0 Communities
1 Members
0 Resources
MeSH Terms
Automated cell boundary and 3D nuclear segmentation of cells in suspension.
Kesler B, Li G, Thiemicke A, Venkat R, Neuert G
(2019) Sci Rep 9: 10237
MeSH Terms: Algorithms, Biological Phenomena, Cell Nucleus, Computational Biology, Image Processing, Computer-Assisted, Microscopy, Optical Imaging, Single-Cell Analysis, Staining and Labeling, Suspensions
Added February 5, 2020
0 Communities
1 Members
0 Resources
10 MeSH Terms
Protein structure prediction using sparse NOE and RDC restraints with Rosetta in CASP13.
Kuenze G, Meiler J
(2019) Proteins 87: 1341-1350
MeSH Terms: Computational Biology, Magnetic Resonance Spectroscopy, Models, Molecular, Protein Conformation, Protein Folding, Proteins, Software
Added March 21, 2020
0 Communities
1 Members
0 Resources
7 MeSH Terms
Multi-tissue transcriptome analyses identify genetic mechanisms underlying neuropsychiatric traits.
Gamazon ER, Zwinderman AH, Cox NJ, Denys D, Derks EM
(2019) Nat Genet 51: 933-940
MeSH Terms: Algorithms, Computational Biology, Gene Expression Profiling, Gene Expression Regulation, Gene Regulatory Networks, Genetic Association Studies, Genetic Predisposition to Disease, Genome-Wide Association Study, Humans, Mental Disorders, Organ Specificity, Polymorphism, Single Nucleotide, Quantitative Trait Loci, Quantitative Trait, Heritable, Transcriptome
Added July 17, 2019
0 Communities
1 Members
0 Resources
MeSH Terms
Response to Anti-PD-1 in Uveal Melanoma Without High-Volume Liver Metastasis.
Johnson DB, Bao R, Ancell KK, Daniels AB, Wallace D, Sosman JA, Luke JJ
(2019) J Natl Compr Canc Netw 17: 114-117
MeSH Terms: Antineoplastic Agents, Immunological, Computational Biology, Gene Expression Profiling, Humans, Liver Neoplasms, Melanoma, Molecular Targeted Therapy, Neoplasm Staging, Prognosis, Programmed Cell Death 1 Receptor, Treatment Outcome, Uveal Neoplasms
Added March 30, 2020
0 Communities
1 Members
0 Resources
12 MeSH Terms
Genome-wide maps of distal gene regulatory enhancers active in the human placenta.
Zhang J, Simonti CN, Capra JA
(2018) PLoS One 13: e0209611
MeSH Terms: Chromosome Mapping, Computational Biology, Enhancer Elements, Genetic, Female, Genes, Regulator, Genome-Wide Association Study, Genomics, Humans, Machine Learning, Molecular Sequence Annotation, Placenta, Pregnancy, ROC Curve
Added March 3, 2020
0 Communities
1 Members
0 Resources
MeSH Terms