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Creative Data Solutions (CDS) is a Vanderbilt Shared Resource and has extensive experience in providing effective and robust solutions to challenges pertaining to research data using modern informatics and bioinformatics approaches.
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Connections to Bias are shown below. Double-click or tap a node for more information.
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- Breast cancer and hormone-replacement therapy.
Dupont WD
(1995) N Engl J Med 333: 1356-7; author reply 1357-8 - Non-steroidal anti-inflammatory drugs and risk of serious coronary heart disease: an observational cohort study.
Ray WA, Stein CM, Hall K, Daugherty JR, Griffin MR
(2002) Lancet 359: 118-23 - Male mice not alone in research.
Bolon B, Barthold SW, Boyd KL, Brayton C, Cardiff RD, Cork LC, Eaton KA, Schoeb TR, Sundberg JP, Ward JM
(2010) Science 328: 1103 - Prostate cancer and the Will Rogers phenomenon.
Albertsen PC, Hanley JA, Barrows GH, Penson DF, Kowalczyk PD, Sanders MM, Fine J
(2005) J Natl Cancer Inst 97: 1248-53 - Five-year outcomes after prostatectomy or radiotherapy for prostate cancer: the prostate cancer outcomes study.
Potosky AL, Davis WW, Hoffman RM, Stanford JL, Stephenson RA, Penson DF, Harlan LC
(2004) J Natl Cancer Inst 96: 1358-67 - Prognostic value of dobutamine stress technetium-99m-sestamibi single-photon emission computed tomography myocardial perfusion imaging: stratification of a high-risk population.
Calnon DA, McGrath PD, Doss AL, Harrell FE, Watson DD, Beller GA
(2001) J Am Coll Cardiol 38: 1511-7 - Rational inferences about departures from Hardy-Weinberg equilibrium.
Wittke-Thompson JK, Pluzhnikov A, Cox NJ
(2005) Am J Hum Genet 76: 967-86 - Previous estimates of mitochondrial DNA mutation level variance did not account for sampling error: comparing the mtDNA genetic bottleneck in mice and humans.
Wonnapinij P, Chinnery PF, Samuels DC
(2010) Am J Hum Genet 86: 540-50 - No bias in linkage analysis.
Abecasis G, Cox N, Daly MJ, Kruglyak L, Laird N, Markianos K, Patterson N
(2004) Am J Hum Genet 75: 722-3; author reply 723-7 - Incorporating Real-time Influenza Detection Into the Test-negative Design for Estimating Influenza Vaccine Effectiveness: The Real-time Test-negative Design (rtTND).
Feldstein LR, Self WH, Ferdinands JM, Randolph AG, Aboodi M, Baughman AH, Brown SM, Exline MC, Files DC, Gibbs K, Ginde AA, Gong MN, Grijalva CG, Halasa N, Khan A, Lindsell CJ, Newhams M, Peltan ID, Prekker ME, Rice TW, Shapiro NI, Steingrub J, Talbot HK, Halloran ME, Patel M, Influenza Vaccine Effectiveness in the Critically Ill (IVY) Investigators and the Pediatric Intensive Care Influenza Vaccine Effectiveness (PICFLU-VE) Investigators
(2021) Clin Infect Dis 72: 1669-1675 - Evaluation of a susceptibility gene for schizophrenia: genotype based meta-analysis of RGS4 polymorphisms from thirteen independent samples.
Talkowski ME, Seltman H, Bassett AS, Brzustowicz LM, Chen X, Chowdari KV, Collier DA, Cordeiro Q, Corvin AP, Deshpande SN, Egan MF, Gill M, Kendler KS, Kirov G, Heston LL, Levitt P, Lewis DA, Li T, Mirnics K, Morris DW, Norton N, O'Donovan MC, Owen MJ, Richard C, Semwal P, Sobell JL, St Clair D, Straub RE, Thelma BK, Vallada H, Weinberger DR, Williams NM, Wood J, Zhang F, Devlin B, Nimgaonkar VL
(2006) Biol Psychiatry 60: 152-62 - Effect of recommendations from reviewers suggested or excluded by authors.
Moore JL, Neilson EG, Siegel V, Associate Editors at Journal of American Society of Nephrology
(2011) J Am Soc Nephrol 22: 1598-602 - Mitochondrial DNA sequence characteristics modulate the size of the genetic bottleneck.
Wilson IJ, Carling PJ, Alston CL, Floros VI, Pyle A, Hudson G, Sallevelt SC, Lamperti C, Carelli V, Bindoff LA, Samuels DC, Wonnapinij P, Zeviani M, Taylor RW, Smeets HJ, Horvath R, Chinnery PF
(2016) Hum Mol Genet 25: 1031-41 - Neural integration of information specifying human structure from form, motion, and depth.
Jackson S, Blake R
(2010) J Neurosci 30: 838-48 - Ovarian cycle effects on immediate reward selection bias in humans: a role for estradiol.
Smith CT, Sierra Y, Oppler SH, Boettiger CA
(2014) J Neurosci 34: 5468-76 - Association between adherence to the Mediterranean diet and oxidative stress.
Dai J, Jones DP, Goldberg J, Ziegler TR, Bostick RM, Wilson PW, Manatunga AK, Shallenberger L, Jones L, Vaccarino V
(2008) Am J Clin Nutr 88: 1364-70 - Immortal time bias in critical care.
Shintani AK, Girard TD, Ely EW
(2010) Crit Care Med 38: 1229 - Immortal time bias in critical care research: application of time-varying Cox regression for observational cohort studies.
Shintani AK, Girard TD, Eden SK, Arbogast PG, Moons KG, Ely EW
(2009) Crit Care Med 37: 2939-45 - Modeling the Impacts of Clinical Influenza Testing on Influenza Vaccine Effectiveness Estimates.
Feldstein LR, Ferdinands JM, Self WH, Randolph AG, Aboodi M, Baughman AH, Brown SM, Exline MC, Clark Files D, Gibbs K, Ginde AA, Gong MN, Grijalva CG, Halasa N, Khan A, Lindsell CJ, Newhams M, Peltan ID, Prekker ME, Rice TW, Shapiro NI, Steingrub J, Talbot HK, Halloran ME, Patel M
(2021) J Infect Dis 224: 2035-2042 - Robust estimation of peptide abundance ratios and rigorous scoring of their variability and bias in quantitative shotgun proteomics.
Pan C, Kora G, Tabb DL, Pelletier DA, McDonald WH, Hurst GB, Hettich RL, Samatova NF
(2006) Anal Chem 78: 7110-20 - ProRata: A quantitative proteomics program for accurate protein abundance ratio estimation with confidence interval evaluation.
Pan C, Kora G, McDonald WH, Tabb DL, VerBerkmoes NC, Hurst GB, Pelletier DA, Samatova NF, Hettich RL
(2006) Anal Chem 78: 7121-31 - Attentional avoidance of fearful facial expressions following early life stress is associated with impaired social functioning.
Humphreys KL, Kircanski K, Colich NL, Gotlib IH
(2016) J Child Psychol Psychiatry 57: 1174-82 - Using the outcome for imputation of missing predictor values was preferred.
Moons KG, Donders RA, Stijnen T, Harrell FE
(2006) J Clin Epidemiol 59: 1092-101 - Internal validation of predictive models: efficiency of some procedures for logistic regression analysis.
Steyerberg EW, Harrell FE, Borsboom GJ, Eijkemans MJ, Vergouwe Y, Habbema JD
(2001) J Clin Epidemiol 54: 774-81 - Penalized maximum likelihood estimation to directly adjust diagnostic and prognostic prediction models for overoptimism: a clinical example.
Moons KG, Donders AR, Steyerberg EW, Harrell FE
(2004) J Clin Epidemiol 57: 1262-70 - Body mass index at various ages and mortality in Chinese women: impact of potential methodological biases.
Zhang X, Shu XO, Chow WH, Yang G, Li H, Gao J, Gao YT, Zheng W
(2008) Int J Obes (Lond) 32: 1130-6 - Estimating the 1978-1990 and future spread of human immunodeficiency virus type 1 in subgroups of homosexual men.
Hoover DR, Muñoz A, Carey V, Chmiel JS, Taylor JM, Margolick JB, Kingsley L, Vermund SH
(1991) Am J Epidemiol 134: 1190-205 - Evaluating medication effects outside of clinical trials: new-user designs.
Ray WA
(2003) Am J Epidemiol 158: 915-20 - Substitution patterns are GC-biased in divergent sequences across the metazoans.
Capra JA, Pollard KS
(2011) Genome Biol Evol 3: 516-27 - The effect of strand bias in Illumina short-read sequencing data.
Guo Y, Li J, Li CI, Long J, Samuels DC, Shyr Y
(2012) BMC Genomics 13: 666 - Relative accuracy of nucleic acid amplification tests and culture in detecting Chlamydia in asymptomatic men.
Cheng H, Macaluso M, Vermund SH, Hook EW
(2001) J Clin Microbiol 39: 3927-37 - Obesity and prostate cancer screening among African-American and Caucasian men.
Fowke JH, Signorello LB, Underwood W, Ukoli FA, Blot WJ
(2006) Prostate 66: 1371-80 - Efficacy of peer-led interventions to reduce unprotected anal intercourse among men who have sex with men: a meta-analysis.
Ye S, Yin L, Amico R, Simoni J, Vermund S, Ruan Y, Shao Y, Qian HZ
(2014) PLoS One 9: e90788 - Expanding the understanding of biases in development of clinical-grade molecular signatures: a case study in acute respiratory viral infections.
Lytkin NI, McVoy L, Weitkamp JH, Aliferis CF, Statnikov A
(2011) PLoS One 6: e20662 - Observation of patients with vesicoureteral reflux off antibiotic prophylaxis: physician bias on patient selection and risk factors for recurrent febrile urinary tract infection.
Drzewiecki BA, Thomas JC, Pope JC, Adams MC, Brock JW, Tanaka ST
(2012) J Urol 188: 1480-4 - Does the magnetization transfer effect bias chemical exchange saturation transfer effects? Quantifying chemical exchange saturation transfer in the presence of magnetization transfer.
Smith AK, Ray KJ, Larkin JR, Craig M, Smith SA, Chappell MA
(2020) Magn Reson Med 84: 1359-1375 - Alternative contingency table measures improve the power and detection of multifactor dimensionality reduction.
Bush WS, Edwards TL, Dudek SM, McKinney BA, Ritchie MD
(2008) BMC Bioinformatics 9: 238 - Misclassification of current benzodiazepine exposure by use of a single baseline measurement and its effects upon studies of injuries.
Ray WA, Thapa PB, Gideon P
(2002) Pharmacoepidemiol Drug Saf 11: 663-9 - Study design for a comprehensive assessment of biologic safety using multiple healthcare data systems.
Herrinton LJ, Curtis JR, Chen L, Liu L, Delzell E, Lewis JD, Solomon DH, Griffin MR, Ouellet-Hellstom R, Beukelman T, Grijalva CG, Haynes K, Kuriya B, Lii J, Mitchel E, Patkar N, Rassen J, Winthrop KL, Nourjah P, Saag KG
(2011) Pharmacoepidemiol Drug Saf 20: 1199-209 - The covariance decomposition of the probability score and its use in evaluating prognostic estimates. SUPPORT Investigators.
Arkes HR, Dawson NV, Speroff T, Harrell FE, Alzola C, Phillips R, Desbiens N, Oye RK, Knaus W, Connors AF
(1995) Med Decis Making 15: 120-31
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