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Creative Data Solutions (CDS) is a Vanderbilt Shared Resource and has extensive experience in providing effective and robust solutions to challenges pertaining to research data using modern informatics and bioinformatics approaches.
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- Olfaction: mosquito receptor for human-sweat odorant.
Hallem EA, Nicole Fox A, Zwiebel LJ, Carlson JR
(2004) Nature 427: 212-3 - Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures.
Stark A, Lin MF, Kheradpour P, Pedersen JS, Parts L, Carlson JW, Crosby MA, Rasmussen MD, Roy S, Deoras AN, Ruby JG, Brennecke J, Harvard FlyBase curators, Berkeley Drosophila Genome Project, Hodges E, Hinrichs AS, Caspi A, Paten B, Park SW, Han MV, Maeder ML, Polansky BJ, Robson BE, Aerts S, van Helden J, Hassan B, Gilbert DG, Eastman DA, Rice M, Weir M, Hahn MW, Park Y, Dewey CN, Pachter L, Kent WJ, Haussler D, Lai EC, Bartel DP, Hannon GJ, Kaufman TC, Eisen MB, Clark AG, Smith D, Celniker SE, Gelbart WM, Kellis M
(2007) Nature 450: 219-32 - Nucleosome organization in the Drosophila genome.
Mavrich TN, Jiang C, Ioshikhes IP, Li X, Venters BJ, Zanton SJ, Tomsho LP, Qi J, Glaser RL, Schuster SC, Gilmour DS, Albert I, Pugh BF
(2008) Nature 453: 358-62 - Evolutionary flux of canonical microRNAs and mirtrons in Drosophila.
Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC
(2010) Nat Genet 42: 6-9; author reply 9-10 - An unusual mosaic protein with a protease domain, encoded by the nudel gene, is involved in defining embryonic dorsoventral polarity in Drosophila.
Hong CC, Hashimoto C
(1995) Cell 82: 785-94 - The white gene of Ceratitis capitata: a phenotypic marker for germline transformation.
Zwiebel LJ, Saccone G, Zacharopoulou A, Besansky NJ, Favia G, Collins FH, Louis C, Kafatos FC
(1995) Science 270: 2005-8 - Identification of functional elements and regulatory circuits by Drosophila modENCODE.
modENCODE Consortium, Roy S, Ernst J, Kharchenko PV, Kheradpour P, Negre N, Eaton ML, Landolin JM, Bristow CA, Ma L, Lin MF, Washietl S, Arshinoff BI, Ay F, Meyer PE, Robine N, Washington NL, Di Stefano L, Berezikov E, Brown CD, Candeias R, Carlson JW, Carr A, Jungreis I, Marbach D, Sealfon R, Tolstorukov MY, Will S, Alekseyenko AA, Artieri C, Booth BW, Brooks AN, Dai Q, Davis CA, Duff MO, Feng X, Gorchakov AA, Gu T, Henikoff JG, Kapranov P, Li R, MacAlpine HK, Malone J, Minoda A, Nordman J, Okamura K, Perry M, Powell SK, Riddle NC, Sakai A, Samsonova A, Sandler JE, Schwartz YB, Sher N, Spokony R, Sturgill D, van Baren M, Wan KH, Yang L, Yu C, Feingold E, Good P, Guyer M, Lowdon R, Ahmad K, Andrews J, Berger B, Brenner SE, Brent MR, Cherbas L, Elgin SC, Gingeras TR, Grossman R, Hoskins RA, Kaufman TC, Kent W, Kuroda MI, Orr-Weaver T, Perrimon N, Pirrotta V, Posakony JW, Ren B, Russell S, Cherbas P, Graveley BR, Lewis S, Micklem G, Oliver B, Park PJ, Celniker SE, Henikoff S, Karpen GH, Lai EC, MacAlpine DM, Stein LD, White KP, Kellis M
(2010) Science 330: 1787-97 - G protein-coupled receptors in Anopheles gambiae.
Hill CA, Fox AN, Pitts RJ, Kent LB, Tan PL, Chrystal MA, Cravchik A, Collins FH, Robertson HM, Zwiebel LJ
(2002) Science 298: 176-8 - Time is the essence: molecular analysis of the biological clock.
Page TL
(1994) Science 263: 1570-2 - Functional and evolutionary insights from the genomes of three parasitoid Nasonia species.
Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Nasonia Genome Working Group, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van de Zande L, Worley KC, Zdobnov EM, Aerts M, Albert S, Anaya VH, Anzola JM, Barchuk AR, Behura SK, Bera AN, Berenbaum MR, Bertossa RC, Bitondi MM, Bordenstein SR, Bork P, Bornberg-Bauer E, Brunain M, Cazzamali G, Chaboub L, Chacko J, Chavez D, Childers CP, Choi JH, Clark ME, Claudianos C, Clinton RA, Cree AG, Cristino AS, Dang PM, Darby AC, de Graaf DC, Devreese B, Dinh HH, Edwards R, Elango N, Elhaik E, Ermolaeva O, Evans JD, Foret S, Fowler GR, Gerlach D, Gibson JD, Gilbert DG, Graur D, Gründer S, Hagen DE, Han Y, Hauser F, Hultmark D, Hunter HC, Hurst GD, Jhangian SN, Jiang H, Johnson RM, Jones AK, Junier T, Kadowaki T, Kamping A, Kapustin Y, Kechavarzi B, Kim J, Kim J, Kiryutin B, Koevoets T, Kovar CL, Kriventseva EV, Kucharski R, Lee H, Lee SL, Lees K, Lewis LR, Loehlin DW, Logsdon JM, Lopez JA, Lozado RJ, Maglott D, Maleszka R, Mayampurath A, Mazur DJ, McClure MA, Moore AD, Morgan MB, Muller J, Munoz-Torres MC, Muzny DM, Nazareth LV, Neupert S, Nguyen NB, Nunes FM, Oakeshott JG, Okwuonu GO, Pannebakker BA, Pejaver VR, Peng Z, Pratt SC, Predel R, Pu LL, Ranson H, Raychoudhury R, Rechtsteiner A, Reese JT, Reid JG, Riddle M, Robertson HM, Romero-Severson J, Rosenberg M, Sackton TB, Sattelle DB, Schlüns H, Schmitt T, Schneider M, Schüler A, Schurko AM, Shuker DM, Simões ZL, Sinha S, Smith Z, Solovyev V, Souvorov A, Springauf A, Stafflinger E, Stage DE, Stanke M, Tanaka Y, Telschow A, Trent C, Vattathil S, Verhulst EC, Viljakainen L, Wanner KW, Waterhouse RM, Whitfield JB, Wilkes TE, Williamson M, Willis JH, Wolschin F, Wyder S, Yamada T, Yi SV, Zecher CN, Zhang L, Gibbs RA
(2010) Science 327: 343-8 - Forces for morphogenesis investigated with laser microsurgery and quantitative modeling.
Hutson MS, Tokutake Y, Chang MS, Bloor JW, Venakides S, Kiehart DP, Edwards GS
(2003) Science 300: 145-9 - Drosophila roadblock and Chlamydomonas LC7: a conserved family of dynein-associated proteins involved in axonal transport, flagellar motility, and mitosis.
Bowman AB, Patel-King RS, Benashski SE, McCaffery JM, Goldstein LS, King SM
(1999) J Cell Biol 146: 165-80 - pipsqueak encodes a novel nuclear protein required downstream of seven-up for the development of photoreceptors R3 and R4.
Weber U, Siegel V, Mlodzik M
(1995) EMBO J 14: 6247-57 - Olfactory responses in a gustatory organ of the malaria vector mosquito Anopheles gambiae.
Kwon HW, Lu T, Rützler M, Zwiebel LJ
(2006) Proc Natl Acad Sci U S A 103: 13526-31 - Candidate odorant receptors from the malaria vector mosquito Anopheles gambiae and evidence of down-regulation in response to blood feeding.
Fox AN, Pitts RJ, Robertson HM, Carlson JR, Zwiebel LJ
(2001) Proc Natl Acad Sci U S A 98: 14693-7 - pipsqueak, an early acting member of the posterior group of genes, affects vasa level and germ cell-somatic cell interaction in the developing egg chamber.
Siegel V, Jongens TA, Jan LY, Jan YN
(1993) Development 119: 1187-202 - Feedback regulation is central to Delta-Notch signalling required for Drosophila wing vein morphogenesis.
Huppert SS, Jacobsen TL, Muskavitch MA
(1997) Development 124: 3283-91 - The Drosophila homolog of MCPH1, a human microcephaly gene, is required for genomic stability in the early embryo.
Rickmyre JL, Dasgupta S, Ooi DL, Keel J, Lee E, Kirschner MW, Waddell S, Lee LA
(2007) J Cell Sci 120: 3565-77 - NELF and GAGA factor are linked to promoter-proximal pausing at many genes in Drosophila.
Lee C, Li X, Hechmer A, Eisen M, Biggin MD, Venters BJ, Jiang C, Li J, Pugh BF, Gilmour DS
(2008) Mol Cell Biol 28: 3290-300 - Transcriptome profiling of chemosensory appendages in the malaria vector Anopheles gambiae reveals tissue- and sex-specific signatures of odor coding.
Pitts RJ, Rinker DC, Jones PL, Rokas A, Zwiebel LJ
(2011) BMC Genomics 12: 271 - The maternal nudel protein of Drosophila has two distinct roles important for embryogenesis.
Hong CC, Hashimoto C
(1996) Genetics 143: 1653-61 - Metastatic ability of Drosophila tumors depends on MMP activity.
Beaucher M, Hersperger E, Page-McCaw A, Shearn A
(2007) Dev Biol 303: 625-34 - Antennal-expressed ammonium transporters in the malaria vector mosquito Anopheles gambiae.
Pitts RJ, Derryberry SL, Pulous FE, Zwiebel LJ
(2014) PLoS One 9: e111858 - Insect Innate Immunity Database (IIID): an annotation tool for identifying immune genes in insect genomes.
Brucker RM, Funkhouser LJ, Setia S, Pauly R, Bordenstein SR
(2012) PLoS One 7: e45125 - Identification of a chemosensory receptor from the yellow fever mosquito, Aedes aegypti, that is highly conserved and expressed in olfactory and gustatory organs.
Melo AC, Rützler M, Pitts RJ, Zwiebel LJ
(2004) Chem Senses 29: 403-10 - A cluster of candidate odorant receptors from the malaria vector mosquito, Anopheles gambiae.
Fox AN, Pitts RJ, Zwiebel LJ
(2002) Chem Senses 27: 453-9 - A novel member of the RING-finger gene family associated with reproductive tissues of the mosquito, Aaedes aegypti.
Zhao X, Smartt CT, Hillyer JF, Christensen BM
(2000) Insect Mol Biol 9: 301-8 - Functional characterization of pheromone receptors in the tobacco budworm Heliothis virescens.
Wang G, Vásquez GM, Schal C, Zwiebel LJ, Gould F
(2011) Insect Mol Biol 20: 125-33 - Myotropic effects of FMRFamide containing peptides on the heart of the mosquito Anopheles gambiae.
Hillyer JF, Estévez-Lao TY, de la Parte LE
(2014) Gen Comp Endocrinol 202: 15-25 - The dynamics of neurogenic signalling underlying bristle development in Drosophila melanogaster.
Parks AL, Huppert SS, Muskavitch MA
(1997) Mech Dev 63: 61-74 - A novel predicted bromodomain-related protein affects coordination between meiosis and spermiogenesis in Drosophila and is required for male meiotic cytokinesis.
Bergner LM, Hickman FE, Wood KH, Wakeman CM, Stone HH, Campbell TJ, Lightcap SB, Favors SM, Aldridge AC, Hales KG
(2010) DNA Cell Biol 29: 487-98 - Induction of two cytochrome P450 genes, Cyp6a2 and Cyp6a8, of Drosophila melanogaster by caffeine in adult flies and in cell culture.
Bhaskara S, Dean ED, Lam V, Ganguly R
(2006) Gene 377: 56-64
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