Keyword Connections

•  James McBride

Resources

• No matching connections

Communities

• No matching connections

Publications

• An integrated semiconductor device enabling non-optical genome sequencing.
  Rothberg JM, Hinz W, Rearick TM, Schultz J, Mileski W, Davey M, Leamon JH, Johnson K, Milgrew MJ, Edwards M, Hoon J, Simons JF, Marran D, Myers JW, Davidson JF, Branting A, Nobile JR, Puc BP, Light D, Clark TA, Huber M, Branciforte JT, Stoner IB, Cawley SE, Lyons M, Fu Y, Homer N, Sedova M, Miao X, Reed B, Sabina J, Feierstein E, Schorn M, Alanjary M, Dimalanta E, Dressman D, Kasinskas R, Sokolsky T, Fidanza JA, Namsaraev E, McKernan KJ, Williams A, Roth GT, Bustillo J
  (2011) Nature 475: 348-52
• Genetic engineering of human pluripotent cells using TALE nucleases.
  Hockemeyer D, Wang H, Kiani S, Lai CS, Gao Q, Cassady JP, Cost GJ, Zhang L, Santiago Y, Miller JC, Zeitler B, Cherone JM, Meng X, Hinkley SJ, Rebar EJ, Gregory PD, Urnov FD, Jaenisch R
  (2011) Nat Biotechnol 29: 731-4
• Structural changes in bacteriorhodopsin during ion transport at 2 angstrom resolution.
  Luecke H, Schobert B, Richter HT, Cartailler JP, Lanyi JK
  (1999) Science 286: 255-61
• Circadian oscillations of cytosolic and chloroplastic free calcium in plants.
  Johnson CH, Knight MR, Kondo T, Masson P, Sedbrook J, Haley A, Trewavas A
  (1995) Science 269: 1863-5
• Light-dependent redistribution of arrestin in vertebrate rods is an energy-independent process governed by protein-protein interactions.
  Nair KS, Hanson SM, Mendez A, Gurevich EV, Kennedy MJ, Shestopalov VI, Vishnivetskiy SA, Chen J, Hurley JB, Gurevich VV, Slepak VZ
  (2005) Neuron 46: 555-67
• Visualizing a circadian clock protein: crystal structure of KaiC and functional insights.
  Pattanayek R, Wang J, Mori T, Xu Y, Johnson CH, Egli M
  (2004) Mol Cell 15: 375-88
• Constant light desynchronizes mammalian clock neurons.
  Ohta H, Yamazaki S, McMahon DG
  (2005) Nat Neurosci 8: 267-9
• A Missense Variant in PLEC Increases Risk of Atrial Fibrillation.
  Thorolfsdottir RB, Sveinbjornsson G, Sulem P, Helgadottir A, Gretarsdottir S, Benonisdottir S, Magnusdottir A, Davidsson OB, Rajamani S, Roden DM, Darbar D, Pedersen TR, Sabatine MS, Jonsdottir I, Arnar DO, Thorsteinsdottir U, Gudbjartsson DF, Holm H, Stefansson K
  (2017) J Am Coll Cardiol 70: 2157-2168
• Sign Inversion in Photopharmacology: Incorporation of Cyclic Azobenzenes in Photoswitchable Potassium Channel Blockers and Openers.
  Trads JB, Hüll K, Matsuura BS, Laprell L, Fehrentz T, Görldt N, Kozek KA, Weaver CD, Klöcker N, Barber DM, Trauner D
  (2019) Angew Chem Int Ed Engl 58: 15421-15428
• White light-emitting diodes based on ultrasmall CdSe nanocrystal electroluminescence.
  Schreuder MA, Xiao K, Ivanov IN, Weiss SM, Rosenthal SJ
  (2010) Nano Lett 10: 573-6
• Dynamic fluctuations in ultrasmall nanocrystals induce white light emission.
  Pennycook TJ, McBride JR, Rosenthal SJ, Pennycook SJ, Pantelides ST
  (2012) Nano Lett 12: 3038-42
• Spectroscopy of single- and double-wall carbon nanotubes in different environments.
  Hertel T, Hagen A, Talalaev V, Arnold K, Hennrich F, Kappes M, Rosenthal S, McBride J, Ulbricht H, Flahaut E
  (2005) Nano Lett 5: 511-4
• Helicobacter pylori dysregulation of gastric epithelial tight junctions by urease-mediated myosin II activation.
  Wroblewski LE, Shen L, Ogden S, Romero-Gallo J, Lapierre LA, Israel DA, Turner JR, Peek RM
  (2009) Gastroenterology 136: 236-46
• Microtubule targeting of substrate contacts promotes their relaxation and dissociation.
  Kaverina I, Krylyshkina O, Small JV
  (1999) J Cell Biol 146: 1033-44
• Peptide probes detect misfolded transthyretin oligomers in plasma of hereditary amyloidosis patients.
  Schonhoft JD, Monteiro C, Plate L, Eisele YS, Kelly JM, Boland D, Parker CG, Cravatt BF, Teruya S, Helmke S, Maurer M, Berk J, Sekijima Y, Novais M, Coelho T, Powers ET, Kelly JW
  (2017) Sci Transl Med 9:
• Bright white light emission from ultrasmall cadmium selenide nanocrystals.
  Rosson TE, Claiborne SM, McBride JR, Stratton BS, Rosenthal SJ
  (2012) J Am Chem Soc 134: 8006-9
• Structure and ultrafast dynamics of white-light-emitting CdSe nanocrystals.
  Bowers MJ, McBride JR, Garrett MD, Sammons JA, Dukes AD, Schreuder MA, Watt TL, Lupini AR, Pennycook SJ, Rosenthal SJ
  (2009) J Am Chem Soc 131: 5730-1
• Selective photochemical treatment of oestrogen receptor in a Xenopus liver extract destroys hormone binding and transcriptional activation but not DNA binding.
  Cridland NA, Wright CV, McKenzie EA, Knowland J
  (1990) EMBO J 9: 1859-66
• Evidence for F-actin-dependent and -independent mechanisms involved in assembly and stability of the medial actomyosin ring in fission yeast.
  Naqvi NI, Eng K, Gould KL, Balasubramanian MK
  (1999) EMBO J 18: 854-62
• Structure and function of the visual arrestin oligomer.
  Hanson SM, Van Eps N, Francis DJ, Altenbach C, Vishnivetskiy SA, Arshavsky VY, Klug CS, Hubbell WL, Gurevich VV
  (2007) EMBO J 26: 1726-36
• Identification of key factors that reduce the variability of the single photon response.
  Caruso G, Bisegna P, Andreucci D, Lenoci L, Gurevich VV, Hamm HE, DiBenedetto E
  (2011) Proc Natl Acad Sci U S A 108: 7804-7
• Isotopically nonstationary 13C flux analysis of changes in Arabidopsis thaliana leaf metabolism due to high light acclimation.
  Ma F, Jazmin LJ, Young JD, Allen DK
  (2014) Proc Natl Acad Sci U S A 111: 16967-72
• Circadian rhythms of superhelical status of DNA in cyanobacteria.
  Woelfle MA, Xu Y, Qin X, Johnson CH
  (2007) Proc Natl Acad Sci U S A 104: 18819-24
• Unfolded protein response activation reduces secretion and extracellular aggregation of amyloidogenic immunoglobulin light chain.
  Cooley CB, Ryno LM, Plate L, Morgan GJ, Hulleman JD, Kelly JW, Wiseman RL
  (2014) Proc Natl Acad Sci U S A 111: 13046-51
• Resonating circadian clocks enhance fitness in cyanobacteria.
  Ouyang Y, Andersson CR, Kondo T, Golden SS, Johnson CH
  (1998) Proc Natl Acad Sci U S A 95: 8660-4
• Mutual entrainment of bilaterally distributed circadian pacemaker.
  Page TL, Caldarola PC, Pittendrigh CS
  (1977) Proc Natl Acad Sci U S A 74: 1277-81
• Extracellular matrix rigidity promotes invadopodia activity.
  Alexander NR, Branch KM, Parekh A, Clark ES, Iwueke IC, Guelcher SA, Weaver AM
  (2008) Curr Biol 18: 1295-1299
• A clock- and light-regulated gene that links the circadian oscillator to LHCB gene expression.
  Xu Y, Johnson CH
  (2001) Plant Cell 13: 1411-25
• Distinct light and clock modulation of cytosolic free Ca2+ oscillations and rhythmic CHLOROPHYLL A/B BINDING PROTEIN2 promoter activity in Arabidopsis.
  Xu X, Hotta CT, Dodd AN, Love J, Sharrock R, Lee YW, Xie Q, Johnson CH, Webb AA
  (2007) Plant Cell 19: 3474-90
• Regulation of fibrinolysis by platelet-released plasminogen activator inhibitor 1: light scattering and ultrastructural examination of lysis of a model platelet-fibrin thrombus.
  Braaten JV, Handt S, Jerome WG, Kirkpatrick J, Lewis JC, Hantgan RR
  (1993) Blood 81: 1290-9
• Adaptive significance of circadian programs in cyanobacteria.
  Johnson CH, Golden SS, Kondo T
  (1998) Trends Microbiol 6: 407-10
• Meta-analysis of genome-wide association studies in East Asian-ancestry populations identifies four new loci for body mass index.
  Wen W, Zheng W, Okada Y, Takeuchi F, Tabara Y, Hwang JY, Dorajoo R, Li H, Tsai FJ, Yang X, He J, Wu Y, He M, Zhang Y, Liang J, Guo X, Sheu WH, Delahanty R, Guo X, Kubo M, Yamamoto K, Ohkubo T, Go MJ, Liu JJ, Gan W, Chen CC, Gao Y, Li S, Lee NR, Wu C, Zhou X, Song H, Yao J, Lee IT, Long J, Tsunoda T, Akiyama K, Takashima N, Cho YS, Ong RT, Lu L, Chen CH, Tan A, Rice TK, Adair LS, Gui L, Allison M, Lee WJ, Cai Q, Isomura M, Umemura S, Kim YJ, Seielstad M, Hixson J, Xiang YB, Isono M, Kim BJ, Sim X, Lu W, Nabika T, Lee J, Lim WY, Gao YT, Takayanagi R, Kang DH, Wong TY, Hsiung CA, Wu IC, Juang JM, Shi J, Choi BY, Aung T, Hu F, Kim MK, Lim WY, Wang TD, Shin MH, Lee J, Ji BT, Lee YH, Young TL, Shin DH, Chun BY, Cho MC, Han BG, Hwu CM, Assimes TL, Absher D, Yan X, Kim E, Kuo JZ, Kwon S, Taylor KD, Chen YD, Rotter JI, Qi L, Zhu D, Wu T, Mohlke KL, Gu D, Mo Z, Wu JY, Lin X, Miki T, Tai ES, Lee JY, Kato N, Shu XO, Tanaka T
  (2014) Hum Mol Genet 23: 5492-504
• Combinatorial polymer matrices enhance in vitro maturation of human induced pluripotent stem cell-derived cardiomyocytes.
  Chun YW, Balikov DA, Feaster TK, Williams CH, Sheng CC, Lee JB, Boire TC, Neely MD, Bellan LM, Ess KC, Bowman AB, Sung HJ, Hong CC
  (2015) Biomaterials 67: 52-64
• Fluorocoxib A loaded nanoparticles enable targeted visualization of cyclooxygenase-2 in inflammation and cancer.
  Uddin MJ, Werfel TA, Crews BC, Gupta MK, Kavanaugh TE, Kingsley PJ, Boyd K, Marnett LJ, Duvall CL
  (2016) Biomaterials 92: 71-80
• An azido-biotin reagent for use in the isolation of protein adducts of lipid-derived electrophiles by streptavidin catch and photorelease.
  Kim HY, Tallman KA, Liebler DC, Porter NA
  (2009) Mol Cell Proteomics 8: 2080-9
• O-sulfonation of serine and threonine: mass spectrometric detection and characterization of a new posttranslational modification in diverse proteins throughout the eukaryotes.
  Medzihradszky KF, Darula Z, Perlson E, Fainzilber M, Chalkley RJ, Ball H, Greenbaum D, Bogyo M, Tyson DR, Bradshaw RA, Burlingame AL
  (2004) Mol Cell Proteomics 3: 429-40
• Systemic but not intraocular Epo gene transfer protects the retina from light-and genetic-induced degeneration.
  Rex TS, Allocca M, Domenici L, Surace EM, Maguire AM, Lyubarsky A, Cellerino A, Bennett J, Auricchio A
  (2004) Mol Ther 10: 855-61