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Creative Data Solutions (CDS) is a Vanderbilt Shared Resource and has extensive experience in providing effective and robust solutions to challenges pertaining to research data using modern informatics and bioinformatics approaches.
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Connections to Electrophoresis, Gel, Two-Dimensional are shown below. Double-click or tap a node for more information.
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- A novel vitronectin receptor integrin (alpha v beta x) is responsible for distinct adhesive properties of carcinoma cells.
Cheresh DA, Smith JW, Cooper HM, Quaranta V
(1989) Cell 57: 59-69 - Molecular imaging of proteins in tissues by mass spectrometry.
Seeley EH, Caprioli RM
(2008) Proc Natl Acad Sci U S A 105: 18126-31 - Flt3 Y591 duplication and Bcl-2 overexpression are detected in acute myeloid leukemia cells with high levels of phosphorylated wild-type p53.
Irish JM, Anensen N, Hovland R, Skavland J, Børresen-Dale AL, Bruserud O, Nolan GP, Gjertsen BT
(2007) Blood 109: 2589-96 - Identification of phosphoprotein NP33 as a nucleus-associated ribosomal S6 protein and its phosphorylation in hematopoietic cells.
Macfarlane DE, Gailani D
(1990) Cancer Res 50: 2895-900 - A COL4A3 gene mutation and post-transplant anti-alpha 3(IV) collagen alloantibodies in Alport syndrome.
Kalluri R, van den Heuvel LP, Smeets HJ, Schroder CH, Lemmink HH, Boutaud A, Neilson EG, Hudson BG
(1995) Kidney Int 47: 1199-204 - Salivary proteomics for oral cancer biomarker discovery.
Hu S, Arellano M, Boontheung P, Wang J, Zhou H, Jiang J, Elashoff D, Wei R, Loo JA, Wong DT
(2008) Clin Cancer Res 14: 6246-52 - Salivary proteomic and genomic biomarkers for primary Sjögren's syndrome.
Hu S, Wang J, Meijer J, Ieong S, Xie Y, Yu T, Zhou H, Henry S, Vissink A, Pijpe J, Kallenberg C, Elashoff D, Loo JA, Wong DT
(2007) Arthritis Rheum 56: 3588-600 - Proteomic analysis of human neutrophil granules.
Lominadze G, Powell DW, Luerman GC, Link AJ, Ward RA, McLeish KR
(2005) Mol Cell Proteomics 4: 1503-21 - Multivariable difference gel electrophoresis and mass spectrometry: a case study on transforming growth factor-beta and ERBB2 signaling.
Friedman DB, Wang SE, Whitwell CW, Caprioli RM, Arteaga CL
(2007) Mol Cell Proteomics 6: 150-69 - Proteomic analysis of human saliva from lung cancer patients using two-dimensional difference gel electrophoresis and mass spectrometry.
Xiao H, Zhang L, Zhou H, Lee JM, Garon EB, Wong DT
(2012) Mol Cell Proteomics 11: M111.012112 - Delineation of a carcinogenic Helicobacter pylori proteome.
Franco AT, Friedman DB, Nagy TA, Romero-Gallo J, Krishna U, Kendall A, Israel DA, Tegtmeyer N, Washington MK, Peek RM
(2009) Mol Cell Proteomics 8: 1947-58 - HDL measures, particle heterogeneity, proposed nomenclature, and relation to atherosclerotic cardiovascular events.
Rosenson RS, Brewer HB, Chapman MJ, Fazio S, Hussain MM, Kontush A, Krauss RM, Otvos JD, Remaley AT, Schaefer EJ
(2011) Clin Chem 57: 392-410 - Alterations in Barrett's-related adenocarcinomas: a proteomic approach.
Peng D, Sheta EA, Powell SM, Moskaluk CA, Washington K, Goldknopf IL, El-Rifai W
(2008) Int J Cancer 122: 1303-10 - Efficient and specific trypsin digestion of microgram to nanogram quantities of proteins in organic-aqueous solvent systems.
Strader MB, Tabb DL, Hervey WJ, Pan C, Hurst GB
(2006) Anal Chem 78: 125-34 - Alterations in the diabetic myocardial proteome coupled with increased myocardial oxidative stress underlies diabetic cardiomyopathy.
Hamblin M, Friedman DB, Hill S, Caprioli RM, Smith HM, Hill MF
(2007) J Mol Cell Cardiol 42: 884-95 - Proteomic analysis of the retina: removal of RPE alters outer segment assembly and retinal protein expression.
Wang X, Nookala S, Narayanan C, Giorgianni F, Beranova-Giorgianni S, McCollum G, Gerling I, Penn JS, Jablonski MM
(2009) Glia 57: 380-92 - Changes in the striatal proteome of YAC128Q mice exhibit gene-environment interactions between mutant huntingtin and manganese.
Wegrzynowicz M, Holt HK, Friedman DB, Bowman AB
(2012) J Proteome Res 11: 1118-32 - Identification, immunolocalization, regulation, and postnatal development of the lipocalin EP17 (epididymal protein of 17 kilodaltons) in the mouse and rat epididymis.
Fouchécourt S, Lareyre JJ, Chaurand P, DaGue BB, Suzuki K, Ong DE, Olson GE, Matusik RJ, Caprioli RM, Orgebin-Crist MC
(2003) Endocrinology 144: 887-900 - Proteomic tools for cell biology.
McDonald WH, Yates JR
(2000) Traffic 1: 747-54 - Glomerular basement membrane. Identification of dimeric subunits of the noncollagenous domain (hexamer) of collagen IV and the Goodpasture antigen.
Gunwar S, Ballester F, Kalluri R, Timoneda J, Chonko AM, Edwards SJ, Noelken ME, Hudson BG
(1991) J Biol Chem 266: 15318-24 - Seminiferous tubule basement membrane. Composition and organization of type IV collagen chains, and the linkage of alpha3(IV) and alpha5(IV) chains.
Kahsai TZ, Enders GC, Gunwar S, Brunmark C, Wieslander J, Kalluri R, Zhou J, Noelken ME, Hudson BG
(1997) J Biol Chem 272: 17023-32 - Identification of Src phosphorylation sites in the catenin p120ctn.
Mariner DJ, Anastasiadis P, Keilhack H, Böhmer FD, Wang J, Reynolds AB
(2001) J Biol Chem 276: 28006-13 - The NC1 domain of collagen IV encodes a novel network composed of the alpha 1, alpha 2, alpha 5, and alpha 6 chains in smooth muscle basement membranes.
Borza DB, Bondar O, Ninomiya Y, Sado Y, Naito I, Todd P, Hudson BG
(2001) J Biol Chem 276: 28532-40 - The transcriptional activity of CITED1 is regulated by phosphorylation in a cell cycle-dependent manner.
Shi G, Boyle SC, Sparrow DB, Dunwoodie SL, Shioda T, de Caestecker MP
(2006) J Biol Chem 281: 27426-35 - Properties of the collagenous domain of the alpha 3(IV) chain, the Goodpasture antigen, of lens basement membrane collagen. Selective cleavage of alpha (IV) chains with retention of their triple helical structure and noncollagenous domain.
Gunwar S, Noelken ME, Hudson BG
(1991) J Biol Chem 266: 14088-94 - Glutathione conjugation and induction of a 32,000 dalton stress protein.
Freeman ML, Meredith MJ
(1989) Biochem Pharmacol 38: 299-304 - Protein processing by the placental protease, cathepsin P.
Hassanein M, Bojja AS, Glazewski L, Lu G, Mason RW
(2009) Mol Hum Reprod 15: 433-42 - Role of the small heat shock proteins in regulating vascular smooth muscle tone.
McLemore EC, Tessier DJ, Thresher J, Komalavilas P, Brophy CM
(2005) J Am Coll Surg 201: 30-6 - Discovery of new membrane-associated proteins overexpressed in small-cell lung cancer.
Ocak S, Friedman DB, Chen H, Ausborn JA, Hassanein M, Detry B, Weynand B, Aboubakar F, Pilette C, Sibille Y, Massion PP
(2014) J Thorac Oncol 9: 324-36 - Proteomic strategies for the characterization and the early detection of lung cancer.
Massion PP, Caprioli RM
(2006) J Thorac Oncol 1: 1027-39 - Alveolar basement membrane: molecular properties of the noncollagenous domain (hexamer) of collagen IV and its reactivity with Goodpasture autoantibodies.
Gunwar S, Bejarano PA, Kalluri R, Langeveld JP, Wisdom BJ, Noelken ME, Hudson BG
(1991) Am J Respir Cell Mol Biol 5: 107-12 - Proteome analysis of human colon cancer by two-dimensional difference gel electrophoresis and mass spectrometry.
Friedman DB, Hill S, Keller JW, Merchant NB, Levy SE, Coffey RJ, Caprioli RM
(2004) Proteomics 4: 793-811 - The wheat-grain proteome as a basis for more efficient cultivar identification.
Skylas DJ, Copeland L, Rathmell WG, Wrigley CW
(2001) Proteomics 1: 1542-6 - A multidimensional proteomic approach to identify hypertrophy-associated proteins.
Lindsey ML, Goshorn DK, Comte-Walters S, Hendrick JW, Hapke E, Zile MR, Schey K
(2006) Proteomics 6: 2225-35 - Guidelines for the next 10 years of proteomics.
Wilkins MR, Appel RD, Van Eyk JE, Chung MC, Görg A, Hecker M, Huber LA, Langen H, Link AJ, Paik YK, Patterson SD, Pennington SR, Rabilloud T, Simpson RJ, Weiss W, Dunn MJ
(2006) Proteomics 6: 4-8 - Subproteomes of soluble and structure-bound Helicobacter pylori proteins analyzed by two-dimensional gel electrophoresis and mass spectrometry.
Backert S, Kwok T, Schmid M, Selbach M, Moese S, Peek RM, König W, Meyer TF, Jungblut PR
(2005) Proteomics 5: 1331-45 - Deciphering the iron response in Acinetobacter baumannii: A proteomics approach.
Nwugo CC, Gaddy JA, Zimbler DL, Actis LA
(2011) J Proteomics 74: 44-58 - Proteome profile of functional mitochondria from human skeletal muscle using one-dimensional gel electrophoresis and HPLC-ESI-MS/MS.
Lefort N, Yi Z, Bowen B, Glancy B, De Filippis EA, Mapes R, Hwang H, Flynn CR, Willis WT, Civitarese A, Højlund K, Mandarino LJ
(2009) J Proteomics 72: 1046-60 - Staphylococcus aureus fur regulates the expression of virulence factors that contribute to the pathogenesis of pneumonia.
Torres VJ, Attia AS, Mason WJ, Hood MI, Corbin BD, Beasley FC, Anderson KL, Stauff DL, McDonald WH, Zimmerman LJ, Friedman DB, Heinrichs DE, Dunman PM, Skaar EP
(2010) Infect Immun 78: 1618-28 - Coordinate synthesis and turnover of heat shock proteins in Borrelia burgdorferi: degradation of DnaK during recovery from heat shock.
Cluss RG, Goel AS, Rehm HL, Schoenecker JG, Boothby JT
(1996) Infect Immun 64: 1736-43
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