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Creative Data Solutions (CDS) is a Vanderbilt Shared Resource and has extensive experience in providing effective and robust solutions to challenges pertaining to research data using modern informatics and bioinformatics approaches.
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- Recognition dynamics up to microseconds revealed from an RDC-derived ubiquitin ensemble in solution.
Lange OF, Lakomek NA, Farès C, Schröder GF, Walter KF, Becker S, Meiler J, Grubmüller H, Griesinger C, de Groot BL
(2008) Science 320: 1471-5 - Interaction with WDR5 promotes target gene recognition and tumorigenesis by MYC.
Thomas LR, Wang Q, Grieb BC, Phan J, Foshage AM, Sun Q, Olejniczak ET, Clark T, Dey S, Lorey S, Alicie B, Howard GC, Cawthon B, Ess KC, Eischen CM, Zhao Z, Fesik SW, Tansey WP
(2015) Mol Cell 58: 440-52 - Ion solvation by channel carbonyls characterized by 17O solid-state NMR at 21 T.
Hu J, Chekmenev EY, Gan Z, Gor'kov PL, Saha S, Brey WW, Cross TA
(2005) J Am Chem Soc 127: 11922-3 - White matter differences between essential tremor and Parkinson disease.
Juttukonda MR, Franco G, Englot DJ, Lin YC, Petersen KJ, Trujillo P, Hedera P, Landman BA, Kang H, Donahue MJ, Konrad PE, Dawant BM, Claassen DO
(2019) Neurology 92: e30-e39 - Effects of diffusion weighting schemes on the reproducibility of DTI-derived fractional anisotropy, mean diffusivity, and principal eigenvector measurements at 1.5T.
Landman BA, Farrell JA, Jones CK, Smith SA, Prince JL, Mori S
(2007) Neuroimage 36: 1123-38 - The radial diffusivity and magnetization transfer pool size ratio are sensitive markers for demyelination in a rat model of type III multiple sclerosis (MS) lesions.
Janve VA, Zu Z, Yao SY, Li K, Zhang FL, Wilson KJ, Ou X, Does MD, Subramaniam S, Gochberg DF
(2013) Neuroimage 74: 298-305 - Multi-site genetic analysis of diffusion images and voxelwise heritability analysis: a pilot project of the ENIGMA-DTI working group.
Jahanshad N, Kochunov PV, Sprooten E, Mandl RC, Nichols TE, Almasy L, Blangero J, Brouwer RM, Curran JE, de Zubicaray GI, Duggirala R, Fox PT, Hong LE, Landman BA, Martin NG, McMahon KL, Medland SE, Mitchell BD, Olvera RL, Peterson CP, Starr JM, Sussmann JE, Toga AW, Wardlaw JM, Wright MJ, Hulshoff Pol HE, Bastin ME, McIntosh AM, Deary IJ, Thompson PM, Glahn DC
(2013) Neuroimage 81: 455-469 - Multi-site study of additive genetic effects on fractional anisotropy of cerebral white matter: Comparing meta and megaanalytical approaches for data pooling.
Kochunov P, Jahanshad N, Sprooten E, Nichols TE, Mandl RC, Almasy L, Booth T, Brouwer RM, Curran JE, de Zubicaray GI, Dimitrova R, Duggirala R, Fox PT, Hong LE, Landman BA, Lemaitre H, Lopez LM, Martin NG, McMahon KL, Mitchell BD, Olvera RL, Peterson CP, Starr JM, Sussmann JE, Toga AW, Wardlaw JM, Wright MJ, Wright SN, Bastin ME, McIntosh AM, Boomsma DI, Kahn RS, den Braber A, de Geus EJ, Deary IJ, Hulshoff Pol HE, Williamson DE, Blangero J, van 't Ent D, Thompson PM, Glahn DC
(2014) Neuroimage 95: 136-50 - Improved fiber tractography with Bayesian tensor regularization.
Lu Y, Aldroubi A, Gore JC, Anderson AW, Ding Z
(2006) Neuroimage 31: 1061-74 - Peripheral sphingolipids are associated with variation in white matter microstructure in older adults.
Gonzalez CE, Venkatraman VK, An Y, Landman BA, Davatzikos C, Ratnam Bandaru VV, Haughey NJ, Ferrucci L, Mielke MM, Resnick SM
(2016) Neurobiol Aging 43: 156-63 - White matter microstructural differences linked to left perisylvian language network in children with dyslexia.
Rimrodt SL, Peterson DJ, Denckla MB, Kaufmann WE, Cutting LE
(2010) Cortex 46: 739-49 - Deuterium nuclear magnetic resonance unambiguously quantifies pore and collagen-bound water in cortical bone.
Ong HH, Wright AC, Wehrli FW
(2012) J Bone Miner Res 27: 2573-81 - The relationship between delirium duration, white matter integrity, and cognitive impairment in intensive care unit survivors as determined by diffusion tensor imaging: the VISIONS prospective cohort magnetic resonance imaging study*.
Morandi A, Rogers BP, Gunther ML, Merkle K, Pandharipande P, Girard TD, Jackson JC, Thompson J, Shintani AK, Geevarghese S, Miller RR, Canonico A, Cannistraci CJ, Gore JC, Ely EW, Hopkins RO, VISIONS Investigation, VISualizing Icu SurvivOrs Neuroradiological Sequelae
(2012) Crit Care Med 40: 2182-9 - Effects of sensitivity to life stress on uncinate fasciculus segments in early adolescence.
Ho TC, King LS, Leong JK, Colich NL, Humphreys KL, Ordaz SJ, Gotlib IH
(2017) Soc Cogn Affect Neurosci 12: 1460-1469 - Domain architecture and biochemical characterization of vertebrate Mcm10.
Robertson PD, Warren EM, Zhang H, Friedman DB, Lary JW, Cole JL, Tutter AV, Walter JC, Fanning E, Eichman BF
(2008) J Biol Chem 283: 3338-3348 - Binding and transport in norepinephrine transporters. Real-time, spatially resolved analysis in single cells using a fluorescent substrate.
Schwartz JW, Blakely RD, DeFelice LJ
(2003) J Biol Chem 278: 9768-77 - Notecarin D binds human factor V and factor Va with high affinity in the absence of membranes.
Newell-Caito JL, Laha M, Tharp AC, Creamer JI, Xu H, Maddur AA, Tans G, Bock PE
(2011) J Biol Chem 286: 38286-38297 - Optic nerve dysfunction in a mouse model of neurofibromatosis-1 optic glioma.
Hegedus B, Hughes FW, Garbow JR, Gianino S, Banerjee D, Kim K, Ellisman MH, Brantley MA, Gutmann DH
(2009) J Neuropathol Exp Neurol 68: 542-51 - One-year change in anterior cingulate cortex white matter microstructure: relationship with late-life depression outcomes.
Taylor WD, Macfall JR, Boyd B, Payne ME, Sheline YI, Krishnan RR, Murali Doraiswamy P
(2011) Am J Geriatr Psychiatry 19: 43-52 - Structural integrity of the uncinate fasciculus and resting state functional connectivity of the ventral prefrontal cortex in late life depression.
Steffens DC, Taylor WD, Denny KL, Bergman SR, Wang L
(2011) PLoS One 6: e22697 - Frontal white matter anisotropy and antidepressant remission in late-life depression.
Taylor WD, Kuchibhatla M, Payne ME, Macfall JR, Sheline YI, Krishnan KR, Doraiswamy PM
(2008) PLoS One 3: e3267 - ZOOM or Non-ZOOM? Assessing Spinal Cord Diffusion Tensor Imaging Protocols for Multi-Centre Studies.
Samson RS, Lévy S, Schneider T, Smith AK, Smith SA, Cohen-Adad J, Gandini Wheeler-Kingshott CA
(2016) PLoS One 11: e0155557 - Micro-computed tomography derived anisotropy detects tumor provoked deviations in bone in an orthotopic osteosarcoma murine model.
Cole HA, Ohba T, Ichikawa J, Nyman JS, Cates JM, Haro H, Schwartz HS, Schoenecker JG
(2014) PLoS One 9: e97381 - Anisotropic Smoothing Improves DT-MRI-Based Muscle Fiber Tractography.
Buck AK, Ding Z, Elder CP, Towse TF, Damon BM
(2015) PLoS One 10: e0126953 - Combining laser microsurgery and finite element modeling to assess cell-level epithelial mechanics.
Hutson MS, Veldhuis J, Ma X, Lynch HE, Cranston PG, Brodland GW
(2009) Biophys J 97: 3075-85 - Dipolar coupling between nitroxide spin labels: the development and application of a tether-in-a-cone model.
Hustedt EJ, Stein RA, Sethaphong L, Brandon S, Zhou Z, Desensi SC
(2006) Biophys J 90: 340-56 - Flexibility of the cytoplasmic domain of the anion exchange protein, band 3, in human erythrocytes.
Blackman SM, Hustedt EJ, Cobb CE, Beth AH
(2001) Biophys J 81: 3363-76 - Quantitative microcomputed tomography analysis of collateral vessel development after ischemic injury.
Duvall CL, Taylor WR, Weiss D, Guldberg RE
(2004) Am J Physiol Heart Circ Physiol 287: H302-10 - Orthogonal diffusion-weighted MRI measures distinguish region-specific degeneration in cerebellar ataxia subtypes.
Ying SH, Landman BA, Chowdhury S, Sinofsky AH, Gambini A, Mori S, Zee DS, Prince JL
(2009) J Neurol 256: 1939-42 - DTI at long diffusion time improves fiber tracking.
Rane S, Nair G, Duong TQ
(2010) NMR Biomed 23: 459-65 - Longitudinal assessment of recovery after spinal cord injury with behavioral measures and diffusion, quantitative magnetization transfer and functional magnetic resonance imaging.
Wu TL, Byun NE, Wang F, Mishra A, Janve VA, Chen LM, Gore JC
(2020) NMR Biomed 33: e4216 - Changes in water diffusion due to Wallerian degeneration in peripheral nerve.
Beaulieu C, Does MD, Snyder RE, Allen PS
(1996) Magn Reson Med 36: 627-31 - Reduction of noise in diffusion tensor images using anisotropic smoothing.
Ding Z, Gore JC, Anderson AW
(2005) Magn Reson Med 53: 485-90 - Functional tractography of white matter by high angular resolution functional-correlation imaging (HARFI).
Schilling KG, Gao Y, Li M, Wu TL, Blaber J, Landman BA, Anderson AW, Ding Z, Gore JC
(2019) Magn Reson Med 81: 2011-2024 - Quantification of DTI in the Pediatric Spinal Cord: Application to Clinical Evaluation in a Healthy Patient Population.
Reynolds BB, By S, Weinberg QR, Witt AA, Newton AT, Feiler HR, Ramkorun B, Clayton DB, Couture P, Martus JE, Adams M, Wellons JC, Smith SA, Bhatia A
(2019) AJNR Am J Neuroradiol 40: 1236-1241 - The VALiDATe29 MRI Based Multi-Channel Atlas of the Squirrel Monkey Brain.
Schilling KG, Gao Y, Stepniewska I, Wu TL, Wang F, Landman BA, Gore JC, Chen LM, Anderson AW
(2017) Neuroinformatics 15: 321-331 - Identification and Optimization of Anthranilic Acid Based Inhibitors of Replication Protein A.
Patrone JD, Pelz NF, Bates BS, Souza-Fagundes EM, Vangamudi B, Camper DV, Kuznetsov AG, Browning CF, Feldkamp MD, Frank AO, Gilston BA, Olejniczak ET, Rossanese OW, Waterson AG, Chazin WJ, Fesik SW
(2016) ChemMedChem 11: 893-9 - Ellipsoidal electrogastrographic forward modelling.
Irimia A, Bradshaw LA
(2005) Phys Med Biol 50: 4429-44 - Subject-specific regional measures of water diffusion are associated with impairment in chronic spinal cord injury.
Choe AS, Sadowsky CL, Smith SA, van Zijl PCM, Pekar JJ, Belegu V
(2017) Neuroradiology 59: 747-758 - Collagen gel anisotropy measured by 2-D laser trap microrheometry.
Parekh A, Velegol D
(2007) Ann Biomed Eng 35: 1231-46
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