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Creative Data Solutions (CDS) is a Vanderbilt Shared Resource and has extensive experience in providing effective and robust solutions to challenges pertaining to research data using modern informatics and bioinformatics approaches.
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Connections to Research Design are shown below. Double-click or tap a node for more information.
Please note that publication matches are limited to 40 in this view. If you expected more, please view all publication matches for Research Design.
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Publications
- Cancer pharmacogenomics: strategies and challenges.
Wheeler HE, Maitland ML, Dolan ME, Cox NJ, Ratain MJ
(2013) Nat Rev Genet 14: 23-34 - Overview of the Alliance for Cellular Signaling.
Gilman AG, Simon MI, Bourne HR, Harris BA, Long R, Ross EM, Stull JT, Taussig R, Bourne HR, Arkin AP, Cobb MH, Cyster JG, Devreotes PN, Ferrell JE, Fruman D, Gold M, Weiss A, Stull JT, Berridge MJ, Cantley LC, Catterall WA, Coughlin SR, Olson EN, Smith TF, Brugge JS, Botstein D, Dixon JE, Hunter T, Lefkowitz RJ, Pawson AJ, Sternberg PW, Varmus H, Subramaniam S, Sinkovits RS, Li J, Mock D, Ning Y, Saunders B, Sternweis PC, Hilgemann D, Scheuermann RH, DeCamp D, Hsueh R, Lin KM, Ni Y, Seaman WE, Simpson PC, O'Connell TD, Roach T, Simon MI, Choi S, Eversole-Cire P, Fraser I, Mumby MC, Zhao Y, Brekken D, Shu H, Meyer T, Chandy G, Heo WD, Liou J, O'Rourke N, Verghese M, Mumby SM, Han H, Brown HA, Forrester JS, Ivanova P, Milne SB, Casey PJ, Harden TK, Arkin AP, Doyle J, Gray ML, Meyer T, Michnick S, Schmidt MA, Toner M, Tsien RY, Natarajan M, Ranganathan R, Sambrano GR, Participating investigators and scientists of the Alliance for Cellular Signaling
(2002) Nature 420: 703-6 - Research tools: Understand how it works.
Piston DW
(2012) Nature 484: 440-1 - Guidelines for investigating causality of sequence variants in human disease.
MacArthur DG, Manolio TA, Dimmock DP, Rehm HL, Shendure J, Abecasis GR, Adams DR, Altman RB, Antonarakis SE, Ashley EA, Barrett JC, Biesecker LG, Conrad DF, Cooper GM, Cox NJ, Daly MJ, Gerstein MB, Goldstein DB, Hirschhorn JN, Leal SM, Pennacchio LA, Stamatoyannopoulos JA, Sunyaev SR, Valle D, Voight BF, Winckler W, Gunter C
(2014) Nature 508: 469-76 - Gal4 turnover and transcription activation.
Collins GA, Lipford JR, Deshaies RJ, Tansey WP
(2009) Nature 461: E7; discussion E8 - Microarrays in brain research: the good, the bad and the ugly.
Mirnics K
(2001) Nat Rev Neurosci 2: 444-7 - The clinical evaluation of new drugs for sepsis. A prospective study design based on survival analysis.
Knaus WA, Harrell FE, Fisher CJ, Wagner DP, Opal SM, Sadoff JC, Draper EA, Walawander CA, Conboy K, Grasela TH
(1993) JAMA 270: 1233-41 - Phase I clinical and pharmacokinetic trial of penclomedine using a novel, two-stage trial design for patients with advanced malignancy.
Berlin J, Stewart JA, Storer B, Tutsch KD, Arzoomanian RZ, Alberti D, Feierabend C, Simon K, Wilding G
(1998) J Clin Oncol 16: 1142-9 - Evaluation methods for social intervention.
Lipsey MW, Cordray DS
(2000) Annu Rev Psychol 51: 345-75 - The case for conducting a randomized clinical trial to assess the efficacy of a single dose of prophylactic HPV vaccines among adolescents.
Kreimer AR, Sherman ME, Sahasrabuddhe VV, Safaeian M
(2015) J Natl Cancer Inst 107: - Secondary sarcomas in childhood cancer survivors: a report from the Childhood Cancer Survivor Study.
Henderson TO, Whitton J, Stovall M, Mertens AC, Mitby P, Friedman D, Strong LC, Hammond S, Neglia JP, Meadows AT, Robison L, Diller L
(2007) J Natl Cancer Inst 99: 300-8 - Five-year outcomes after prostatectomy or radiotherapy for prostate cancer: the prostate cancer outcomes study.
Potosky AL, Davis WW, Hoffman RM, Stanford JL, Stephenson RA, Penson DF, Harlan LC
(2004) J Natl Cancer Inst 96: 1358-67 - Re: Microfibrillar structure of type I collagen in situ.
Okuyama K, Bächinger HP, Mizuno K, Boudko S, Engel J, Berisio R, Vitagliano L
(2009) Acta Crystallogr D Biol Crystallogr 65: 1007-8; author reply 1009-10 - Clinical judgment and therapeutic decision making.
Hlatky MA, Califf RM, Harrell FE, Lee KL, Mark DB, Muhlbaier LH, Pryor DB
(1990) J Am Coll Cardiol 15: 1-14 - Advancing the Science in Gastric Pre-Neoplasia: Study Design Considerations.
Davitkov P, Altayar O, Shah SC, Gawron AJ, Mustafa RA, Sultan S, Morgan DR
(2020) Gastroenterology 158: 751-759 - Not all mice are the same: Standardization of animal research data presentation.
Omary MB, Cohen DE, El-Omar EM, Jalan R, Low MJ, Nathanson MH, Peek RM, Turner JR
(2016) Hepatology 63: 1752-4 - No bias in linkage analysis.
Abecasis G, Cox N, Daly MJ, Kruglyak L, Laird N, Markianos K, Patterson N
(2004) Am J Hum Genet 75: 722-3; author reply 723-7 - The importance of genealogy in determining genetic associations with complex traits.
Newman DL, Abney M, McPeek MS, Ober C, Cox NJ
(2001) Am J Hum Genet 69: 1146-8 - Sepsis trials. Intersection of investigation, regulation, funding, and practice.
Bernard GR
(1995) Am J Respir Crit Care Med 152: 4-10 - Developing a human immunodeficiency virus/acquired immunodeficiency syndrome therapeutic research agenda for resource-limited countries: a consensus statement.
Vermund SH, Powderly WG, Infectious Diseases Society of America, HIV Medicine Association of IDSA
(2003) Clin Infect Dis 37: S4-12 - A Coordinated Attack: Rett Syndrome Therapeutic Development.
Gogliotti RG, Niswender CM
(2019) Trends Pharmacol Sci 40: 233-236 - Optimizing the design and analysis of clinical functional magnetic resonance imaging research studies.
Carter CS, Heckers S, Nichols T, Pine DS, Strother S
(2008) Biol Psychiatry 64: 842-9 - Unmet need in rheumatology: reports from the Targeted Therapies meeting 2019.
Winthrop KL, Weinblatt ME, Bathon J, Burmester GR, Mease PJ, Crofford L, Bykerk V, Dougados M, Rosenbaum JT, Mariette X, Sieper J, Melchers F, Cronstein BN, Breedveld FC, Kalden J, Smolen JS, Furst D
(2020) Ann Rheum Dis 79: 88-93 - Bridging Translation by Improving Preclinical Study Design in AKI.
de Caestecker M, Humphreys BD, Liu KD, Fissell WH, Cerda J, Nolin TD, Askenazi D, Mour G, Harrell FE, Pullen N, Okusa MD, Faubel S, ASN AKI Advisory Group
(2015) J Am Soc Nephrol 26: 2905-16 - Making progress in schizophrenia research.
Heckers S
(2008) Schizophr Bull 34: 591-4 - Disease associations. Chance, artifact, or susceptibility genes?
Cox NJ, Bell GI
(1989) Diabetes 38: 947-50 - Clinical trial design and end points for epidermal growth factor receptor-targeted therapies: implications for drug development and practice.
Arteaga CL, Baselga J
(2003) Clin Cancer Res 9: 1579-89 - Opportunities and obstacles to combination targeted therapy in renal cell cancer.
Sosman JA, Puzanov I, Atkins MB
(2007) Clin Cancer Res 13: 764s-769s - The Lambeth Conventions (II): guidelines for the study of animal and human ventricular and supraventricular arrhythmias.
Curtis MJ, Hancox JC, Farkas A, Wainwright CL, Stables CL, Saint DA, Clements-Jewery H, Lambiase PD, Billman GE, Janse MJ, Pugsley MK, Ng GA, Roden DM, Camm AJ, Walker MJ
(2013) Pharmacol Ther 139: 213-48 - Effect of combination glipizide GITS/metformin on fibrinolytic and metabolic parameters in poorly controlled type 2 diabetic subjects.
Cefalu WT, Schneider DJ, Carlson HE, Migdal P, Gan Lim L, Izon MP, Kapoor A, Bell-Farrow A, Terry JG, Sobel BE
(2002) Diabetes Care 25: 2123-8 - Symptom reports are not reliable during ambulatory reflux monitoring.
Kavitt RT, Higginbotham T, Slaughter JC, Patel D, Yuksel ES, Lominadze Z, Abou-Ismail A, Pasricha T, Garrett CG, Hagaman D, Vaezi MF
(2012) Am J Gastroenterol 107: 1826-32 - Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles).
Kinsinger CR, Apffel J, Baker M, Bian X, Borchers CH, Bradshaw R, Brusniak MY, Chan DW, Deutsch EW, Domon B, Gorman J, Grimm R, Hancock W, Hermjakob H, Horn D, Hunter C, Kolar P, Kraus HJ, Langen H, Linding R, Moritz RL, Omenn GS, Orlando R, Pandey A, Ping P, Rahbar A, Rivers R, Seymour SL, Simpson RJ, Slotta D, Smith RD, Stein SE, Tabb DL, Tagle D, Yates JR, Rodriguez H
(2011) Mol Cell Proteomics 10: O111.015446 - Cohort profile: the North American AIDS Cohort Collaboration on Research and Design (NA-ACCORD).
Gange SJ, Kitahata MM, Saag MS, Bangsberg DR, Bosch RJ, Brooks JT, Calzavara L, Deeks SG, Eron JJ, Gebo KA, Gill MJ, Haas DW, Hogg RS, Horberg MA, Jacobson LP, Justice AC, Kirk GD, Klein MB, Martin JN, McKaig RG, Rodriguez B, Rourke SB, Sterling TR, Freeman AM, Moore RD
(2007) Int J Epidemiol 36: 294-301 - Comparisons of persistence and durability among three oral antidiabetic therapies using electronic prescription-fill data: the impact of adherence requirements and stockpiling.
Greevy RA, Huizinga MM, Roumie CL, Grijalva CG, Murff H, Liu X, Griffin MR
(2011) Clin Pharmacol Ther 90: 813-9 - The emerging role of electronic medical records in pharmacogenomics.
Wilke RA, Xu H, Denny JC, Roden DM, Krauss RM, McCarty CA, Davis RL, Skaar T, Lamba J, Savova G
(2011) Clin Pharmacol Ther 89: 379-86 - A pharmacodynamic interaction between caffeine and phenylpropanolamine.
Brown NJ, Ryder D, Branch RA
(1991) Clin Pharmacol Ther 50: 363-71 - Pneumothorax detection: a problem in experimental design.
Carr JJ, Reed JC, Choplin RH, Case LD
(1993) Radiology 186: 23-5; discussion 25-6 - Calcified coronary artery plaque measurement with cardiac CT in population-based studies: standardized protocol of Multi-Ethnic Study of Atherosclerosis (MESA) and Coronary Artery Risk Development in Young Adults (CARDIA) study.
Carr JJ, Nelson JC, Wong ND, McNitt-Gray M, Arad Y, Jacobs DR, Sidney S, Bild DE, Williams OD, Detrano RC
(2005) Radiology 234: 35-43 - Simultaneous control of error rates in fMRI data analysis.
Kang H, Blume J, Ombao H, Badre D
(2015) Neuroimage 123: 102-13 - Immortal time bias in critical care research: application of time-varying Cox regression for observational cohort studies.
Shintani AK, Girard TD, Eden SK, Arbogast PG, Moons KG, Ely EW
(2009) Crit Care Med 37: 2939-45
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