Emily Hodges
Faculty Member
Last active: 4/26/2017

  1. Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5' terminal nucleotide. Mi S, Cai T, Hu Y, Chen Y, Hodges E, Ni F, Wu L, Li S, Zhou H, Long C, Chen S, Hannon GJ, Qi Y (2008) Cell 133(1): 116-27
    › Primary publication · 18342361 (PubMed) · PMC2981139 (PubMed Central)
  2. Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes. Tam OH, Aravin AA, Stein P, Girard A, Murchison EP, Cheloufi S, Hodges E, Anger M, Sachidanandam R, Schultz RM, Hannon GJ (2008) Nature 453(7194): 534-8
    › Primary publication · 18404147 (PubMed) · PMC2981145 (PubMed Central)
  3. Conservation of small RNA pathways in platypus. Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grützner F, Stark A, Hannon GJ (2008) Genome Res 18(6): 995-1004
    › Primary publication · 18463306 (PubMed) · PMC2413167 (PubMed Central)
  4. Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes. Stark A, Kheradpour P, Parts L, Brennecke J, Hodges E, Hannon GJ, Kellis M (2007) Genome Res 17(12): 1865-79
    › Primary publication · 17989255 (PubMed) · PMC2099594 (PubMed Central)
  5. Genome-wide in situ exon capture for selective resequencing. Hodges E, Xuan Z, Balija V, Kramer M, Molla MN, Smith SW, Middle CM, Rodesch MJ, Albert TJ, Hannon GJ, McCombie WR (2007) Nat Genet 39(12): 1522-7
    › Primary publication · 17982454 (PubMed)
  6. Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures. Stark A, Lin MF, Kheradpour P, Pedersen JS, Parts L, Carlson JW, Crosby MA, Rasmussen MD, Roy S, Deoras AN, Ruby JG, Brennecke J, Harvard FlyBase curators, Berkeley Drosophila Genome Project, Hodges E, Hinrichs AS, Caspi A, Paten B, Park SW, Han MV, Maeder ML, Polansky BJ, Robson BE, Aerts S, van Helden J, Hassan B, Gilbert DG, Eastman DA, Rice M, Weir M, Hahn MW, Park Y, Dewey CN, Pachter L, Kent WJ, Haussler D, Lai EC, Bartel DP, Hannon GJ, Kaufman TC, Eisen MB, Clark AG, Smith D, Celniker SE, Gelbart WM, Kellis M (2007) Nature 450(7167): 219-32
    › Primary publication · 17994088 (PubMed) · PMC2474711 (PubMed Central)
  7. Thorough validation of siRNA-induced cell death phenotypes defines new anti-apoptotic protein. Wu W, Hodges E, Höög C (2006) Nucleic Acids Res 34(2): e13
    › Primary publication · 16432257 (PubMed) · PMC1345702 (PubMed Central)
  8. NovelFam3000--uncharacterized human protein domains conserved across model organisms. Kemmer D, Podowski RM, Arenillas D, Lim J, Hodges E, Roth P, Sonnhammer EL, Höög C, Wasserman WW (2006) BMC Genomics : 48
    › Primary publication · 16533400 (PubMed) · PMC1440326 (PubMed Central)
  9. Accelerated discovery of novel protein function in cultured human cells. Hodges E, Redelius JS, Wu W, Höög C (2005) Mol Cell Proteomics 4(9): 1319-27
    › Primary publication · 15965266 (PubMed)
  10. Exploring the foundation of genomics: a northern blot reference set for the comparative analysis of transcript profiling technologies. Kemmer D, Faxén M, Hodges E, Lim J, Herzog E, Ljungström E, Lundmark A, Olsen MK, Podowski R, Sonnhammer EL, Nilsson P, Reimers M, Lenhard B, Roberds SL, Wahlestedt C, Höög C, Agarwal P, Wasserman WW (2004) Comp Funct Genomics 5(8): 584-95
    › Primary publication · 18629180 (PubMed) · PMC2447472 (PubMed Central)