W. Rathmell
Last active: 11/27/2019

W. Rathmell M.D., Ph.D. - Publications

  1. Machine Learning Detects Pan-cancer Ras Pathway Activation in The Cancer Genome Atlas. Way GP, Sanchez-Vega F, La K, Armenia J, Chatila WK, Luna A, Sander C, Cherniack AD, Mina M, Ciriello G, Schultz N, Cancer Genome Atlas Research Network, Sanchez Y, Greene CS (2018) Cell Rep 23(1): 172-180.e3
    › Primary publication · 29617658 (PubMed) · PMC5918694 (PubMed Central)
  2. lncRNA Epigenetic Landscape Analysis Identifies EPIC1 as an Oncogenic lncRNA that Interacts with MYC and Promotes Cell-Cycle Progression in Cancer. Wang Z, Yang B, Zhang M, Guo W, Wu Z, Wang Y, Jia L, Li S, Cancer Genome Atlas Research Network, Xie W, Yang D (2018) Cancer Cell 33(4): 706-720.e9
    › Primary publication · 29622465 (PubMed) · PMC6143179 (PubMed Central)
  3. Integrative radiomics expression predicts molecular subtypes of primary clear cell renal cell carcinoma. Yin Q, Hung SC, Rathmell WK, Shen L, Wang L, Lin W, Fielding JR, Khandani AH, Woods ME, Milowsky MI, Brooks SA, Wallen EM, Shen D (2018) Clin Radiol 73(9): 782-791
    › Primary publication · 29801658 (PubMed) · PMC6078810 (PubMed Central)
  4. Integrated Molecular Characterization of Testicular Germ Cell Tumors. Shen H, Shih J, Hollern DP, Wang L, Bowlby R, Tickoo SK, Thorsson V, Mungall AJ, Newton Y, Hegde AM, Armenia J, Sánchez-Vega F, Pluta J, Pyle LC, Mehra R, Reuter VE, Godoy G, Jones J, Shelley CS, Feldman DR, Vidal DO, Lessel D, Kulis T, Cárcano FM, Leraas KM, Lichtenberg TM, Brooks D, Cherniack AD, Cho J, Heiman DI, Kasaian K, Liu M, Noble MS, Xi L, Zhang H, Zhou W, ZenKlusen JC, Hutter CM, Felau I, Zhang J, Schultz N, Getz G, Meyerson M, Stuart JM, Cancer Genome Atlas Research Network, Akbani R, Wheeler DA, Laird PW, Nathanson KL, Cortessis VK, Hoadley KA (2018) Cell Rep 23(11): 3392-3406
    › Primary publication · 29898407 (PubMed) · PMC6075738 (PubMed Central)
  5. Integrated Genomic Analysis of the Ubiquitin Pathway across Cancer Types. Ge Z, Leighton JS, Wang Y, Peng X, Chen Z, Chen H, Sun Y, Yao F, Li J, Zhang H, Liu J, Shriver CD, Hu H, Cancer Genome Atlas Research Network, Piwnica-Worms H, Ma L, Liang H (2018) Cell Rep 23(1): 213-226.e3
    › Primary publication · 29617661 (PubMed) · PMC5916807 (PubMed Central)
  6. High Frequency of Ovarian Cyst Development in Vhl;Snf5 Mice. Kuwahara Y, Kennedy LM, Karnezis AN, Mora-Blanco EL, Rogers AB, Fletcher CD, Huntsman DG, Roberts CWM, Rathmell WK, Weissman BE (2018) Am J Pathol 188(7): 1510-1516
    › Primary publication · 29684361 (PubMed) · PMC6024179 (PubMed Central)
  7. Haploinsufficiency for Microtubule Methylation Is an Early Driver of Genomic Instability in Renal Cell Carcinoma. Chiang YC, Park IY, Terzo EA, Tripathi DN, Mason FM, Fahey CC, Karki M, Shuster CB, Sohn BH, Chowdhury P, Powell RT, Ohi R, Tsai YS, de Cubas AA, Khan A, Davis IJ, Strahl BD, Parker JS, Dere R, Walker CL, Rathmell WK (2018) Cancer Res 78(12): 3135-3146
    › Primary publication · 29724720 (PubMed) · PMC6004258 (PubMed Central)
  8. Genomic, Pathway Network, and Immunologic Features Distinguishing Squamous Carcinomas. Campbell JD, Yau C, Bowlby R, Liu Y, Brennan K, Fan H, Taylor AM, Wang C, Walter V, Akbani R, Byers LA, Creighton CJ, Coarfa C, Shih J, Cherniack AD, Gevaert O, Prunello M, Shen H, Anur P, Chen J, Cheng H, Hayes DN, Bullman S, Pedamallu CS, Ojesina AI, Sadeghi S, Mungall KL, Robertson AG, Benz C, Schultz A, Kanchi RS, Gay CM, Hegde A, Diao L, Wang J, Ma W, Sumazin P, Chiu HS, Chen TW, Gunaratne P, Donehower L, Rader JS, Zuna R, Al-Ahmadie H, Lazar AJ, Flores ER, Tsai KY, Zhou JH, Rustgi AK, Drill E, Shen R, Wong CK, Cancer Genome Atlas Research Network, Stuart JM, Laird PW, Hoadley KA, Weinstein JN, Peto M, Pickering CR, Chen Z, Van Waes C (2018) Cell Rep 23(1): 194-212.e6
    › Primary publication · 29617660 (PubMed) · PMC6002769 (PubMed Central)
  9. Genomic and Molecular Landscape of DNA Damage Repair Deficiency across The Cancer Genome Atlas. Knijnenburg TA, Wang L, Zimmermann MT, Chambwe N, Gao GF, Cherniack AD, Fan H, Shen H, Way GP, Greene CS, Liu Y, Akbani R, Feng B, Donehower LA, Miller C, Shen Y, Karimi M, Chen H, Kim P, Jia P, Shinbrot E, Zhang S, Liu J, Hu H, Bailey MH, Yau C, Wolf D, Zhao Z, Weinstein JN, Li L, Ding L, Mills GB, Laird PW, Wheeler DA, Shmulevich I, Cancer Genome Atlas Research Network, Monnat RJ, Xiao Y, Wang C (2018) Cell Rep 23(1): 239-254.e6
    › Primary publication · 29617664 (PubMed) · PMC5961503 (PubMed Central)
  10. Genomic and Functional Approaches to Understanding Cancer Aneuploidy. Taylor AM, Shih J, Ha G, Gao GF, Zhang X, Berger AC, Schumacher SE, Wang C, Hu H, Liu J, Lazar AJ, Cancer Genome Atlas Research Network, Cherniack AD, Beroukhim R, Meyerson M (2018) Cancer Cell 33(4): 676-689.e3
    › Primary publication · 29622463 (PubMed) · PMC6028190 (PubMed Central)