David Tabb
Faculty Member
Last active: 6/26/2014

  1. MS1, MS2, and SQT-three unified, compact, and easily parsed file formats for the storage of shotgun proteomic spectra and identifications. McDonald WH, Tabb DL, Sadygov RG, MacCoss MJ, Venable J, Graumann J, Johnson JR, Cociorva D, Yates JR (2004) Rapid Commun Mass Spectrom 18(18): 2162-8
    › Primary publication · 15317041 (PubMed)
  2. Influence of basic residue content on fragment ion peak intensities in low-energy collision-induced dissociation spectra of peptides. Tabb DL, Huang Y, Wysocki VH, Yates JR (2004) Anal Chem 76(5): 1243-8
    › Primary publication · 14987077 (PubMed) · PMC2813199 (PubMed Central)
  3. Characterization of the 70S Ribosome from Rhodopseudomonas palustris using an integrated "top-down" and "bottom-up" mass spectrometric approach. Strader MB, Verberkmoes NC, Tabb DL, Connelly HM, Barton JW, Bruce BD, Pelletier DA, Davison BH, Hettich RL, Larimer FW, Hurst GB (2004) J Proteome Res 3(5): 965-78
    › Primary publication · 15473684 (PubMed)
  4. Statistical characterization of ion trap tandem mass spectra from doubly charged tryptic peptides. Tabb DL, Smith LL, Breci LA, Wysocki VH, Lin D, Yates JR (2003) Anal Chem 75(5): 1155-63
    › Primary publication · 12641236 (PubMed) · PMC2819022 (PubMed Central)
  5. Similarity among tandem mass spectra from proteomic experiments: detection, significance, and utility. Tabb DL, MacCoss MJ, Wu CC, Anderson SD, Yates JR (2003) Anal Chem 75(10): 2470-7
    › Primary publication · 12918992 (PubMed)
  6. Large-scale protein identification using mass spectrometry. Lin D, Tabb DL, Yates JR (2003) Biochim Biophys Acta 1646(1-2): 1-10
    › Primary publication · 12637006 (PubMed)
  7. GutenTag: high-throughput sequence tagging via an empirically derived fragmentation model. Tabb DL, Saraf A, Yates JR (2003) Anal Chem 75(23): 6415-21
    › Primary publication · 14640709 (PubMed) · PMC2915448 (PubMed Central)
  8. Cleavage N-terminal to proline: analysis of a database of peptide tandem mass spectra. Breci LA, Tabb DL, Yates JR, Wysocki VH (2003) Anal Chem 75(9): 1963-71
    › Primary publication · 12720328 (PubMed)
  9. Automated discrimination of polymerase chain reaction products with closely related sequences by software-based detection of characteristic peaks in product ion spectra. Muhammad WT, Tabb DL, Fox KF, Fox A (2003) Rapid Commun Mass Spectrom 17(24): 2755-62
    › Primary publication · 14673823 (PubMed)
  10. DTASelect and Contrast: tools for assembling and comparing protein identifications from shotgun proteomics. Tabb DL, McDonald WH, Yates JR (2002) J Proteome Res 1(1): 21-6
    › Primary publication · 12643522 (PubMed) · PMC2811961 (PubMed Central)