David Tabb
Faculty Member
Last active: 6/26/2014

  1. QC metrics from CPTAC raw LC-MS/MS data interpreted through multivariate statistics. Wang X, Chambers MC, Vega-Montoto LJ, Bunk DM, Stein SE, Tabb DL (2014) Anal Chem 86(5): 2497-509
    › Primary publication · 24494671 (PubMed) · PMC3982976 (PubMed Central)
  2. Employing ProteoWizard to Convert Raw Mass Spectrometry Data. Holman JD, Tabb DL, Mallick P (2014) Curr Protoc Bioinformatics : 13.24.1-9
    › Primary publication · 24939128 (PubMed) · PMC4113728 (PubMed Central)
  3. Quality assessment for clinical proteomics. Tabb DL (2013) Clin Biochem 46(6): 411-20
    › Primary publication · 23246537 (PubMed) · PMC3602213 (PubMed Central)
  4. Neurovascular unit on a chip: implications for translational applications. Alcendor DJ, Block FE, Cliffel DE, Daniels JS, Ellacott KL, Goodwin CR, Hofmeister LH, Li D, Markov DA, May JC, McCawley LJ, McLaughlin B, McLean JA, Niswender KD, Pensabene V, Seale KT, Sherrod SD, Sung HJ, Tabb DL, Webb DJ, Wikswo JP (2013) Stem Cell Res Ther : S18
    › Primary publication · 24564885 (PubMed) · PMC4029462 (PubMed Central)
  5. Informatics of protein and posttranslational modification detection via shotgun proteomics. Holman JD, Dasari S, Tabb DL (2013) Methods Mol Biol : 167-79
    › Primary publication · 23625403 (PubMed) · PMC4012295 (PubMed Central)
  6. IDPQuantify: combining precursor intensity with spectral counts for protein and peptide quantification. Chen YY, Chambers MC, Li M, Ham AJ, Turner JL, Zhang B, Tabb DL (2013) J Proteome Res 12(9): 4111-21
    › Primary publication · 23879310 (PubMed) · PMC3804902 (PubMed Central)
  7. Identification of proteins at active, stalled, and collapsed replication forks using isolation of proteins on nascent DNA (iPOND) coupled with mass spectrometry. Sirbu BM, McDonald WH, Dungrawala H, Badu-Nkansah A, Kavanaugh GM, Chen Y, Tabb DL, Cortez D (2013) J Biol Chem 288(44): 31458-67
    › Primary publication · 24047897 (PubMed) · PMC3814742 (PubMed Central)
  8. HI-bone: a scoring system for identifying phenylisothiocyanate-derivatized peptides based on precursor mass and high intensity fragment ions. Perez-Riverol Y, Sánchez A, Noda J, Borges D, Carvalho PC, Wang R, Vizcaíno JA, Betancourt L, Ramos Y, Duarte G, Nogueira FC, González LJ, Padrón G, Tabb DL, Hermjakob H, Domont GB, Besada V (2013) Anal Chem 85(7): 3515-20
    › Primary publication · 23448308 (PubMed)
  9. Basophile: accurate fragment charge state prediction improves peptide identification rates. Wang D, Dasari S, Chambers MC, Holman JD, Chen K, Liebler DC, Orton DJ, Purvine SO, Monroe ME, Chung CY, Rose KL, Tabb DL (2013) Genomics Proteomics Bioinformatics 11(2): 86-95
    › Primary publication · 23499924 (PubMed) · PMC3737598 (PubMed Central)
  10. The evolutionary imprint of domestication on genome variation and function of the filamentous fungus Aspergillus oryzae. Gibbons JG, Salichos L, Slot JC, Rinker DC, McGary KL, King JG, Klich MA, Tabb DL, McDonald WH, Rokas A (2012) Curr Biol 22(15): 1403-9
    › Primary publication · 22795693 (PubMed) · PMC3416971 (PubMed Central)