1. RNAseq by Total RNA Library Identifies Additional RNAs Compared to Poly(A) RNA Library. Guo Y, Zhao S, Sheng Q, Guo M, Lehmann B, Pietenpol J, Samuels DC, Shyr Y (2015) Biomed Res Int : 862130
    › Primary publication · 26543871 (PubMed) · PMC4620295 (PubMed Central)
  2. Mitochondrial DNA Haplogroups and Neurocognitive Impairment During HIV Infection. Hulgan T, Samuels DC, Bush W, Ellis RJ, Letendre SL, Heaton RK, Franklin DR, Straub P, Murdock DG, Clifford DB, Collier AC, Gelman BB, Marra CM, McArthur JC, McCutchan JA, Morgello S, Simpson DM, Grant I, Kallianpur AR, CHARTER Group (2015) Clin Infect Dis 61(9): 1476-84
    › Primary publication · 26129753 (PubMed) · PMC4599391 (PubMed Central)
  3. Genome measures used for quality control are dependent on gene function and ancestry. Wang J, Raskin L, Samuels DC, Shyr Y, Guo Y (2015) Bioinformatics 31(3): 318-23
    › Primary publication · 25297068 (PubMed) · PMC4308666 (PubMed Central)
  4. Fine Time Scaling of Purifying Selection on Human Nonsynonymous mtDNA Mutations Based on the Worldwide Population Tree and Mother-Child Pairs. Cavadas B, Soares P, Camacho R, Brandão A, Costa MD, Fernandes V, Pereira JB, Rito T, Samuels DC, Pereira L (2015) Hum Mutat 36(11): 1100-11
    › Primary publication · 26252938 (PubMed)
  5. Three-stage quality control strategies for DNA re-sequencing data. Guo Y, Ye F, Sheng Q, Clark T, Samuels DC (2014) Brief Bioinform 15(6): 879-89
    › Primary publication · 24067931 (PubMed) · PMC4492405 (PubMed Central)
  6. Multi-perspective quality control of Illumina exome sequencing data using QC3. Guo Y, Zhao S, Sheng Q, Ye F, Li J, Lehmann B, Pietenpol J, Samuels DC, Shyr Y (2014) Genomics 103(5-6): 323-8
    › Primary publication · 24703969 (PubMed) · PMC5755963 (PubMed Central)
  7. Mitochondrial haplogroups are associated with severity of diabetic retinopathy. Estopinal CB, Chocron IM, Parks MB, Wade EA, Roberson RM, Burgess LG, Brantley MA, Samuels DC (2014) Invest Ophthalmol Vis Sci 55(9): 5589-95
    › Primary publication · 25118268 (PubMed) · PMC4160073 (PubMed Central)
  8. Mitochondrial DNA rearrangements in health and disease--a comprehensive study. Damas J, Samuels DC, Carneiro J, Amorim A, Pereira F (2014) Hum Mutat 35(1): 1-14
    › Primary publication · 24115352 (PubMed)
  9. Illumina human exome genotyping array clustering and quality control. Guo Y, He J, Zhao S, Wu H, Zhong X, Sheng Q, Samuels DC, Shyr Y, Long J (2014) Nat Protoc 9(11): 2643-62
    › Primary publication · 25321409 (PubMed) · PMC4441213 (PubMed Central)
  10. High-throughput sequencing in mitochondrial DNA research. Ye F, Samuels DC, Clark T, Guo Y (2014) Mitochondrion : 157-63
    › Primary publication · 24859348 (PubMed) · PMC4149223 (PubMed Central)