1. Cell-Based Systems Biology Analysis of Human AS03-Adjuvanted H5N1 Avian Influenza Vaccine Responses: A Phase I Randomized Controlled Trial. Howard LM, Hoek KL, Goll JB, Samir P, Galassie A, Allos TM, Niu X, Gordy LE, Creech CB, Prasad N, Jensen TL, Hill H, Levy SE, Joyce S, Link AJ, Edwards KM (2017) PLoS One 12(1): e0167488
    › Primary publication · 28099485 (PubMed) · PMC5242433 (PubMed Central)
  2. l2 Multiple Kernel Fuzzy SVM-Based Data Fusion for Improving Peptide Identification. Jian L, Xia Z, Niu X, Liang X, Samir P, Link AJ (2016) IEEE/ACM Trans Comput Biol Bioinform 13(4): 804-9
    › Primary publication · 26394437 (PubMed)
  3. Viral infection causes a shift in the self peptide repertoire presented by human MHC class I molecules. Spencer CT, Bezbradica JS, Ramos MG, Arico CD, Conant SB, Gilchuk P, Gray JJ, Zheng M, Niu X, Hildebrand W, Link AJ, Joyce S (2015) Proteomics Clin Appl 9(11-12): 1035-52
    › Primary publication · 26768311 (PubMed) · PMC4920078 (PubMed Central)
  4. Proteomic contributions to our understanding of vaccine and immune responses. Galassie AC, Link AJ (2015) Proteomics Clin Appl 9(11-12): 972-89
    › Primary publication · 26172619 (PubMed) · PMC4713355 (PubMed Central)
  5. Focus on Immunology and Proteomics. Link AJ (2015) Proteomics Clin Appl 9(11-12): 965-6
    › Primary publication · 26768310 (PubMed)
  6. Environmental Interactions and Epistasis Are Revealed in the Proteomic Responses to Complex Stimuli. Samir P, Rahul , Slaughter JC, Link AJ (2015) PLoS One 10(8): e0134099
    › Primary publication · 26247773 (PubMed) · PMC4527715 (PubMed Central)
  7. An adaptive classification model for peptide identification. Liang X, Xia Z, Jian L, Niu X, Link A (2015) BMC Genomics : S1
    › Primary publication · 26578406 (PubMed) · PMC4652454 (PubMed Central)
  8. A cell-based systems biology assessment of human blood to monitor immune responses after influenza vaccination. Hoek KL, Samir P, Howard LM, Niu X, Prasad N, Galassie A, Liu Q, Allos TM, Floyd KA, Guo Y, Shyr Y, Levy SE, Joyce S, Edwards KM, Link AJ (2015) PLoS One 10(2): e0118528
    › Primary publication · 25706537 (PubMed) · PMC4338067 (PubMed Central)
  9. Analysis of protein composition using multidimensional chromatography and mass spectrometry. Link AJ, Washburn MP (2014) Curr Protoc Protein Sci : 23.1.1-25
    › Primary publication · 25367006 (PubMed)
  10. The yeast eukaryotic translation initiation factor 2B translation initiation complex interacts with the fatty acid synthesis enzyme YBR159W and endoplasmic reticulum membranes. Browne CM, Samir P, Fites JS, Villarreal SA, Link AJ (2013) Mol Cell Biol 33(5): 1041-56
    › Primary publication · 23263984 (PubMed) · PMC3623073 (PubMed Central)