Jonathan Irish Ph.D. - Publications

  1. Two New Neutrophil Subsets Define a Discriminating Sepsis Signature. Meghraoui-Kheddar A, Chousterman BG, Guillou N, Barone SM, Granjeaud S, Vallet H, Corneau A, Guessous K, de Roquetaillade C, Boissonnas A, Irish JM, Combadière C (2022) Am J Respir Crit Care Med 205(1): 46-59
    › Primary publication · 34731593 (PubMed)
  2. Unsupervised machine learning reveals key immune cell subsets in COVID-19, rhinovirus infection, and cancer therapy. Barone SM, Paul AG, Muehling LM, Lannigan JA, Kwok WW, Turner RB, Woodfolk JA, Irish JM (2021) Elife
    › Primary publication · 34350827 (PubMed) · PMC8370768 (PubMed Central)
  3. Targeting In Vivo Metabolic Vulnerabilities of Th2 and Th17 Cells Reduces Airway Inflammation. Healey DCC, Cephus JY, Barone SM, Chowdhury NU, Dahunsi DO, Madden MZ, Ye X, Yu X, Olszewski K, Young K, Gerriets VA, Siska PJ, Dworski R, Hemler J, Locasale JW, Poyurovsky MV, Peebles RS, Irish JM, Newcomb DC, Rathmell JC (2021) J Immunol 206(6): 1127-1139
    › Primary publication · 33558372 (PubMed) · PMC7946768 (PubMed Central)
  4. Single-Cell Profiling of the Antigen-Specific Response to BNT162b2 SARS-CoV-2 RNA Vaccine. Kramer KJ, Wilfong EM, Voss K, Barone SM, Shiakolas AR, Raju N, Roe CE, Suryadevara N, Walker L, Wall SC, Paulo A, Schaefer S, Dahunsi D, Westlake CS, Crowe JE, Carnahan RH, Rathmell JC, Bonami RH, Georgiev IS, Irish JM (2021) bioRxiv
    › Primary publication · 34341788 (PubMed) · PMC8328055 (PubMed Central)
  5. Single-cell analysis by mass cytometry reveals metabolic states of early-activated CD8 T cells during the primary immune response. Levine LS, Hiam-Galvez KJ, Marquez DM, Tenvooren I, Madden MZ, Contreras DC, Dahunsi DO, Irish JM, Oluwole OO, Rathmell JC, Spitzer MH (2021) Immunity 54(4): 829-844.e5
    › Primary publication · 33705706 (PubMed) · PMC8046726 (PubMed Central)
  6. Selective Inhibition of JAK1 Primes STAT5-Driven Human Leukemia Cells for ATRA-Induced Differentiation. Ramsey HE, Stengel K, Pino JC, Johnston G, Childress M, Gorska AE, Arrate PM, Fuller L, Villaume M, Fischer MA, Ferrell PB, Roe CE, Zou J, Lubbock ALR, Stubbs M, Zinkel S, Irish JM, Lopez CF, Hiebert S, Savona MR (2021) Target Oncol 16(5): 663-674
    › Primary publication · 34324169 (PubMed) · PMC8667588 (PubMed Central)
  7. Nonclassical Monocytes Are Prone to Migrate Into Tumor in Diffuse Large B-Cell Lymphoma. Le Gallou S, Lhomme F, Irish JM, Mingam A, Pangault C, Monvoisin C, Ferrant J, Azzaoui I, Rossille D, Bouabdallah K, Damaj G, Cartron G, Godmer P, Le Gouill S, Casasnovas RO, Molina TJ, Houot R, Lamy T, Tarte K, Fest T, Roussel M (2021) Front Immunol : 755623
    › Primary publication · 34975843 (PubMed) · PMC8716558 (PubMed Central)
  8. HLA-DR cancer cells expression correlates with T cell infiltration and is enriched in lung adenocarcinoma with indolent behavior. Senosain MF, Zou Y, Novitskaya T, Vasiukov G, Balar AB, Rowe DJ, Doxie DB, Lehman JM, Eisenberg R, Maldonado F, Zijlstra A, Novitskiy SV, Irish JM, Massion PP (2021) Sci Rep 11(1): 14424
    › Primary publication · 34257356 (PubMed) · PMC8277797 (PubMed Central)
  9. DebarcodeR increases fluorescent cell barcoding capacity and accuracy. Reisman BJ, Barone SM, Bachmann BO, Irish JM (2021) Cytometry A 99(9): 946-953
    › Primary publication · 33960644 (PubMed) · PMC8410645 (PubMed Central)
  10. CMV exposure drives long-term CD57+ CD4 memory T-cell inflation following allogeneic stem cell transplant. Yeh AC, Varelias A, Reddy A, Barone SM, Olver SD, Chilson K, Onstad LE, Ensbey KS, Henden AS, Samson L, Jaeger CA, Bi T, Dahlman KB, Kim TK, Zhang P, Degli-Esposti MA, Newell EW, Jagasia MH, Irish JM, Lee SJ, Hill GR (2021) Blood 138(26): 2874-2885
    › Primary publication · 34115118 (PubMed) · PMC8718626 (PubMed Central)