Dan Roden
Faculty Member
Last active: 3/24/2020

Phenome-wide association studies: a new method for functional genomics in humans.

Roden DM
J Physiol. 2017 595 (12): 4109-4115

PMID: 28229460 · PMCID: PMC5471509 · DOI:10.1113/JP273122

In experimental physiological research, a common study design for examining the functional role of a gene or a genetic variant is to introduce that genetic variant into a model organism (such as yeast or mouse) and then to search for phenotypic consequences. The development of DNA biobanks linked to dense phenotypic information enables such an experiment to be applied to human subjects in the form of a phenome-wide association study (PheWAS). The PheWAS paradigm takes advantage of a curated medical phenome, often derived from electronic health records, to search for associations between 'input functions' and phenotypes in an unbiased fashion. The most commonly studied input function to date has been single nucleotide polymorphisms (SNPs), but other inputs, such as sets of SNPs or a disease or drug exposure, are now being explored to probe the genetic and phenotypic architecture of human traits. Potential outcomes of these approaches include defining subsets of complex diseases (that can then be targeted by specific therapies) and drug repurposing.

© 2017 The Authors. The Journal of Physiology © 2017 The Physiological Society.

MeSH Terms (7)

Animals Genome-Wide Association Study Genomics Genomics Humans Phenotype Polymorphism, Single Nucleotide

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