Sergey Budko
Faculty Member
Last active: 11/2/2017

Profile

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Publications

The following timeline graph is generated from all co-authored publications.

Featured publications are shown below:

  1. Collagen IV and basement membrane at the evolutionary dawn of metazoan tissues. Fidler AL, Darris CE, Chetyrkin SV, Pedchenko VK, Boudko SP, Brown KL, Gray Jerome W, Hudson JK, Rokas A, Hudson BG (2017) Elife
    › Primary publication · 28418331 (PubMed)
  2. Structural insight for chain selection and stagger control in collagen. Boudko SP, Bächinger HP (2016) Sci Rep : 37831
    › Primary publication · 27897211 (PubMed) · PMC5126661 (PubMed Central)
  3. Structure and Biophysical Properties of a Triple-Stranded Beta-Helix Comprising the Central Spike of Bacteriophage T4. Buth SA, Menin L, Shneider MM, Engel J, Boudko SP, Leiman PG (2015) Viruses 7(8): 4676-706
    › Primary publication · 26295253 (PubMed) · PMC4576200 (PubMed Central)
  4. TRAIL-Based High Throughput Screening Reveals a Link between TRAIL-Mediated Apoptosis and Glutathione Reductase, a Key Component of Oxidative Stress Response. Rozanov D, Cheltsov A, Sergienko E, Vasile S, Golubkov V, Aleshin AE, Levin T, Traer E, Hann B, Freimuth J, Alexeev N, Alekseyev MA, Budko SP, Bächinger HP, Spellman P (2015) PLoS One 10(6): e0129566
    › Primary publication · 26075913 (PubMed) · PMC4468210 (PubMed Central)
  5. Recessive osteogenesis imperfecta caused by missense mutations in SPARC. Mendoza-Londono R, Fahiminiya S, Majewski J, Care4Rare Canada Consortium, Tétreault M, Nadaf J, Kannu P, Sochett E, Howard A, Stimec J, Dupuis L, Roschger P, Klaushofer K, Palomo T, Ouellet J, Al-Jallad H, Mort JS, Moffatt P, Boudko S, Bächinger HP, Rauch F (2015) Am J Hum Genet 96(6): 979-85
    › Primary publication · 26027498 (PubMed) · PMC4457955 (PubMed Central)
  6. Cole-Carpenter syndrome is caused by a heterozygous missense mutation in P4HB. Rauch F, Fahiminiya S, Majewski J, Carrot-Zhang J, Boudko S, Glorieux F, Mort JS, Bächinger HP, Moffatt P (2015) Am J Hum Genet 96(3): 425-31
    › Primary publication · 25683117 (PubMed) · PMC4375435 (PubMed Central)
  7. Ziploc-ing the structure: Triple helix formation is coordinated by rough endoplasmic reticulum resident PPIases. Ishikawa Y, Boudko S, Bächinger HP (2015) Biochim Biophys Acta 1850(10): 1983-93
    › Primary publication · 25583561 (PubMed)
  8. Biological role of prolyl 3-hydroxylation in type IV collagen. Pokidysheva E, Boudko S, Vranka J, Zientek K, Maddox K, Moser M, Fässler R, Ware J, Bächinger HP (2014) Proc Natl Acad Sci U S A 111(1): 161-6
    › Primary publication · 24368846 (PubMed) · PMC3890855 (PubMed Central)
  9. Icosahedral bacteriophage ΦX174 forms a tail for DNA transport during infection. Sun L, Young LN, Zhang X, Boudko SP, Fokine A, Zbornik E, Roznowski AP, Molineux IJ, Rossmann MG, Fane BA (2014) Nature 505(7483): 432-5
    › Primary publication · 24336205 (PubMed)
  10. Structure of human peptidyl-prolyl cis-trans isomerase FKBP22 containing two EF-hand motifs. Boudko SP, Ishikawa Y, Nix J, Chapman MS, Bächinger HP (2014) Protein Sci 23(1): 67-75
    › Primary publication · 24272907 (PubMed) · PMC3892300 (PubMed Central)
  11. Vascular Ehlers-Danlos syndrome mutations in type III collagen differently stall the triple helical folding. Mizuno K, Boudko S, Engel J, Bächinger HP (2013) J Biol Chem 288(26): 19166-76
    › Primary publication · 23645670 (PubMed) · PMC3696688 (PubMed Central)
  12. Analytical methods for measuring collagen XIX in human cell cultures, tissue extracts, and biological fluids. Oudart JB, Brassart-Pasco S, Luczka E, Dupont-Deshorgue A, Bellon G, Boudko SP, Bächinger HP, Monboisse JC, Maquart FX, Ramont L (2013) Anal Biochem 437(2): 111-7
    › Primary publication · 23499763 (PubMed)
  13. Crystal structures of wild-type and mutated cyclophilin B that causes hyperelastosis cutis in the American quarter horse. Boudko SP, Ishikawa Y, Lerch TF, Nix J, Chapman MS, Bächinger HP (2012) BMC Res Notes : 626
    › Primary publication · 23137129 (PubMed) · PMC3522003 (PubMed Central)
  14. The NC2 domain of type IX collagen determines the chain register of the triple helix. Boudko SP, Bächinger HP (2012) J Biol Chem 287(53): 44536-45
    › Primary publication · 23132862 (PubMed) · PMC3531767 (PubMed Central)
  15. Mutation in cyclophilin B that causes hyperelastosis cutis in American Quarter Horse does not affect peptidylprolyl cis-trans isomerase activity but shows altered cyclophilin B-protein interactions and affects collagen folding. Ishikawa Y, Vranka JA, Boudko SP, Pokidysheva E, Mizuno K, Zientek K, Keene DR, Rashmir-Raven AM, Nagata K, Winand NJ, Bächinger HP (2012) J Biol Chem 287(26): 22253-65
    › Primary publication · 22556420 (PubMed) · PMC3381186 (PubMed Central)
  16. The crucial role of trimerization domains in collagen folding. Boudko SP, Engel J, Bächinger HP (2012) Int J Biochem Cell Biol 44(1): 21-32
    › Primary publication · 22001560 (PubMed)
  17. Crystal structure of the human collagen XV trimerization domain: a potent trimerizing unit common to multiplexin collagens. Wirz JA, Boudko SP, Lerch TF, Chapman MS, Bächinger HP (2011) Matrix Biol 30(1): 9-15
    › Primary publication · 20932905 (PubMed) · PMC3048825 (PubMed Central)
  18. Kinetic hysteresis in collagen folding. Mizuno K, Boudko SP, Engel J, Bächinger HP (2010) Biophys J 98(12): 3004-14
    › Primary publication · 20550913 (PubMed) · PMC2884267 (PubMed Central)
  19. The NC2 domain of collagen IX provides chain selection and heterotrimerization. Boudko SP, Zientek KD, Vance J, Hacker JL, Engel J, Bächinger HP (2010) J Biol Chem 285(31): 23721-31
    › Primary publication · 20507993 (PubMed) · PMC2911272 (PubMed Central)
  20. Re: Microfibrillar structure of type I collagen in situ. Okuyama K, Bächinger HP, Mizuno K, Boudko S, Engel J, Berisio R, Vitagliano L (2009) Acta Crystallogr D Biol Crystallogr 65(Pt 9): 1007-8; author reply 1009-10
    › Primary publication · 19690380 (PubMed)
  21. Crystal structure of human collagen XVIII trimerization domain: A novel collagen trimerization Fold. Boudko SP, Sasaki T, Engel J, Lerch TF, Nix J, Chapman MS, Bächinger HP (2009) J Mol Biol 392(3): 787-802
    › Primary publication · 19631658 (PubMed) · PMC3048824 (PubMed Central)
  22. Trimerization and triple helix stabilization of the collagen XIX NC2 domain. Boudko SP, Engel J, Bächinger HP (2008) J Biol Chem 283(49): 34345-51
    › Primary publication · 18845531 (PubMed) · PMC2662240 (PubMed Central)
  23. Crystal structure of human type III collagen Gly991-Gly1032 cystine knot-containing peptide shows both 7/2 and 10/3 triple helical symmetries. Boudko SP, Engel J, Okuyama K, Mizuno K, Bächinger HP, Schumacher MA (2008) J Biol Chem 283(47): 32580-9
    › Primary publication · 18805790 (PubMed)
  24. The coiled-coil domain structure of the Sin Nombre virus nucleocapsid protein. Boudko SP, Kuhn RJ, Rossmann MG (2007) J Mol Biol 366(5): 1538-44
    › Primary publication · 17222867 (PubMed) · PMC1820746 (PubMed Central)
  25. Collagen triple-helix formation in all-trans chains proceeds by a nucleation/growth mechanism with a purely entropic barrier. Bachmann A, Kiefhaber T, Boudko S, Engel J, Bächinger HP (2005) Proc Natl Acad Sci U S A 102(39): 13897-902
    › Primary publication · 16172389 (PubMed) · PMC1236557 (PubMed Central)
  26. Design and crystal structure of bacteriophage T4 mini-fibritin NCCF. Boudko SP, Strelkov SV, Engel J, Stetefeld J (2004) J Mol Biol 339(4): 927-35
    › Primary publication · 15165860 (PubMed)
  27. Structure formation in the C terminus of type III collagen guides disulfide cross-linking. Boudko SP, Engel J (2004) J Mol Biol 335(5): 1289-97
    › Primary publication · 14729344 (PubMed)
  28. Collagen stabilization at atomic level: crystal structure of designed (GlyProPro)10foldon. Stetefeld J, Frank S, Jenny M, Schulthess T, Kammerer RA, Boudko S, Landwehr R, Okuyama K, Engel J (2003) Structure 11(3): 339-46
    › Primary publication · 12623021 (PubMed)
  29. Collagen triple helix formation can be nucleated at either end. Frank S, Boudko S, Mizuno K, Schulthess T, Engel J, Bächinger HP (2003) J Biol Chem 278(10): 7747-50
    › Primary publication · 12540847 (PubMed)
  30. Nucleation and propagation of the collagen triple helix in single-chain and trimerized peptides: transition from third to first order kinetics. Boudko S, Frank S, Kammerer RA, Stetefeld J, Schulthess T, Landwehr R, Lustig A, Bächinger HP, Engel J (2002) J Mol Biol 317(3): 459-70
    › Primary publication · 11922677 (PubMed)
  31. Domain organization, folding and stability of bacteriophage T4 fibritin, a segmented coiled-coil protein. Boudko SP, Londer YY, Letarov AV, Sernova NV, Engel J, Mesyanzhinov VV (2002) Eur J Biochem 269(3): 833-41
    › Primary publication · 11846809 (PubMed)
  32. Properties of bacteriophage T4 baseplate protein encoded by gene 8. Shneider MM, Boudko SP, Lustig A, Mesyanzhinov VV (2001) Biochemistry (Mosc) 66(6): 693-7
    › Primary publication · 11421820 (PubMed)
  33. The carboxy-terminal domain initiates trimerization of bacteriophage T4 fibritin. Letarov AV, Londer YY, Boudko SP, Mesyanzhinov VV (1999) Biochemistry (Mosc) 64(7): 817-23
    › Primary publication · 10424907 (PubMed)