William French

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Publications

The following timeline graph is generated from all co-authored publications.

1. Whole-Exome Sequencing Identifies Novel Somatic Mutations in Chinese Breast Cancer Patients. Zhang Y, Cai Q, Shu XO, Gao YT, Li C, Zheng W, Long J (2015) J Mol Genet Med 9(4)
   › Primary publication · 26870154 (PubMed) · PMC4747093 (PubMed Central)
2. APOE ε4 associated with preserved executive function performance and maintenance of temporal and cingulate brain volumes in younger adults. Taylor WD, Boyd B, Turner R, McQuoid DR, Ashley-Koch A, MacFall JR, Saleh A, Potter GG (2017) Brain Imaging Behav 11(1): 194-204
   › Primary publication · 26843007 (PubMed) · PMC4972704 (PubMed Central)
3. Characterization of the Domain Orientations of E. coli 5'-Nucleotidase by Fitting an Ensemble of Conformers to DEER Distance Distributions. Krug U, Alexander NS, Stein RA, Keim A, Mchaourab HS, Sträter N, Meiler J (2016) Structure 24(1): 43-56
   › Primary publication · 26724996 (PubMed) · PMC4706771 (PubMed Central)
4. Autocorrelation descriptor improvements for QSAR: 2DA_Sign and 3DA_Sign. Sliwoski G, Mendenhall J, Meiler J (2016) J Comput Aided Mol Des 30(3): 209-17
   › Primary publication · 26721261 (PubMed) · PMC4803518 (PubMed Central)
5. Integrative genomic analysis reveals functional diversification of APOBEC gene family in breast cancer. Zhang Y, Delahanty R, Guo X, Zheng W, Long J (2015) Hum Genomics : 34
   › Primary publication · 26682542 (PubMed) · PMC4684623 (PubMed Central)
6. Integrative Omics Analysis Reveals Post-Transcriptionally Enhanced Protective Host Response in Colorectal Cancers with Microsatellite Instability. Liu Q, Zhang B (2016) J Proteome Res 15(3): 766-76
   › Primary publication · 26680540 (PubMed) · PMC4782175 (PubMed Central)
7. proBAMsuite, a Bioinformatics Framework for Genome-Based Representation and Analysis of Proteomics Data. Wang X, Slebos RJ, Chambers MC, Tabb DL, Liebler DC, Zhang B (2016) Mol Cell Proteomics 15(3): 1164-75
   › Primary publication · 26657539 (PubMed) · PMC4813696 (PubMed Central)
8. Evaluation of potential regulatory function of breast cancer risk locus at 6q25.1. Sun Y, Ye C, Guo X, Wen W, Long J, Gao YT, Shu XO, Zheng W, Cai Q (2016) Carcinogenesis 37(2): 163-168
   › Primary publication · 26645718 (PubMed) · PMC5006208 (PubMed Central)
9. A Genome-Scale Investigation of Incongruence in Culicidae Mosquitoes. Wang Y, Zhou X, Yang D, Rokas A (2015) Genome Biol Evol 7(12): 3463-71
   › Primary publication · 26608059 (PubMed) · PMC4700963 (PubMed Central)
10. GEneSTATION 1.0: a synthetic resource of diverse evolutionary and functional genomic data for studying the evolution of pregnancy-associated tissues and phenotypes. Kim M, Cooper BA, Venkat R, Phillips JB, Eidem HR, Hirbo J, Nutakki S, Williams SM, Muglia LJ, Capra JA, Petren K, Abbot P, Rokas A, McGary KL (2016) Nucleic Acids Res 44(D1): D908-16
    › Primary publication · 26567549 (PubMed) · PMC4702823 (PubMed Central)
11. Absolute Configuration of (-)-Centratherin, a Sesquiterpenoid Lactone, Defined by Means of Chiroptical Spectroscopy. Junior FM, Covington CL, de Albuquerque AC, Lobo JF, Borges RM, de Amorim MB, Polavarapu PL (2015) J Nat Prod 78(11): 2617-23
    › Primary publication · 26565920 (PubMed)
12. A Structural Study of CESA1 Catalytic Domain of Arabidopsis Cellulose Synthesis Complex: Evidence for CESA Trimers. Vandavasi VG, Putnam DK, Zhang Q, Petridis L, Heller WT, Nixon BT, Haigler CH, Kalluri U, Coates L, Langan P, Smith JC, Meiler J, O'Neill H (2016) Plant Physiol 170(1): 123-35
    › Primary publication · 26556795 (PubMed) · PMC4704586 (PubMed Central)
13. Genetic Determinants of Pelvic Organ Prolapse among African American and Hispanic Women in the Women's Health Initiative. Giri A, Wu JM, Ward RM, Hartmann KE, Park AJ, North KE, Graff M, Wallace RB, Bareh G, Qi L, O'Sullivan MJ, Reiner AP, Edwards TL, Velez Edwards DR (2015) PLoS One 10(11): e0141647
    › Primary publication · 26545240 (PubMed) · PMC4636147 (PubMed Central)
14. RNAseq by Total RNA Library Identifies Additional RNAs Compared to Poly(A) RNA Library. Guo Y, Zhao S, Sheng Q, Guo M, Lehmann B, Pietenpol J, Samuels DC, Shyr Y (2015) Biomed Res Int : 862130
    › Primary publication · 26543871 (PubMed) · PMC4620295 (PubMed Central)
15. Assessing Computational Steps for CLIP-Seq Data Analysis. Liu Q, Zhong X, Madison BB, Rustgi AK, Shyr Y (2015) Biomed Res Int : 196082
    › Primary publication · 26539468 (PubMed) · PMC4619761 (PubMed Central)
16. Quantitative CT Imaging of Ventral Hernias: Preliminary Validation of an Anatomical Labeling Protocol. Xu Z, Asman AJ, Baucom RB, Abramson RG, Poulose BK, Landman BA (2015) PLoS One 10(10): e0141671
    › Primary publication · 26509450 (PubMed) · PMC4624799 (PubMed Central)
17. Global gene expression profiling reveals a suppressed immune response pathway associated with 3q amplification in squamous carcinoma of the lung. Qian J, Zou Y, Wang J, Zhang B, Massion PP (2015) Genom Data : 272-4
    › Primary publication · 26484266 (PubMed) · PMC4583673 (PubMed Central)
18. Associating Multivariate Quantitative Phenotypes with Genetic Variants in Family Samples with a Novel Kernel Machine Regression Method. Yan Q, Weeks DE, Celedón JC, Tiwari HK, Li B, Wang X, Lin WY, Lou XY, Gao G, Chen W, Liu N (2015) Genetics 201(4): 1329-39
    › Primary publication · 26482791 (PubMed) · PMC4676518 (PubMed Central)
19. BCL::Conf: small molecule conformational sampling using a knowledge based rotamer library. Kothiwale S, Mendenhall JL, Meiler J (2015) J Cheminform : 47
    › Primary publication · 26473018 (PubMed) · PMC4607025 (PubMed Central)
20. Effects of acute tryptophan depletion on raphé functional connectivity in depression. Weinstein JJ, Rogers BP, Taylor WD, Boyd BD, Cowan RL, Shelton KM, Salomon RM (2015) Psychiatry Res 234(2): 164-71
    › Primary publication · 26411798 (PubMed) · PMC4631618 (PubMed Central)
21. Determination of the Absolute Configurations Using Exciton Chirality Method for Vibrational Circular Dichroism: Right Answers for the Wrong Reasons? Covington CL, Nicu VP, Polavarapu PL (2015) J Phys Chem A 119(42): 10589-601
    › Primary publication · 26401833 (PubMed)
22. Competition and allostery govern substrate selectivity of cyclooxygenase-2. Mitchener MM, Hermanson DJ, Shockley EM, Brown HA, Lindsley CW, Reese J, Rouzer CA, Lopez CF, Marnett LJ (2015) Proc Natl Acad Sci U S A 112(40): 12366-71
    › Primary publication · 26392530 (PubMed) · PMC4603459 (PubMed Central)
23. Optimization of Search Engines and Postprocessing Approaches to Maximize Peptide and Protein Identification for High-Resolution Mass Data. Tu C, Sheng Q, Li J, Ma D, Shen X, Wang X, Shyr Y, Yi Z, Qu J (2015) J Proteome Res 14(11): 4662-73
    › Primary publication · 26390080 (PubMed) · PMC4859434 (PubMed Central)
24. Trans-ancestry genome-wide association study identifies 12 genetic loci influencing blood pressure and implicates a role for DNA methylation. Kato N, Loh M, Takeuchi F, Verweij N, Wang X, Zhang W, Kelly TN, Saleheen D, Lehne B, Leach IM, Drong AW, Abbott J, Wahl S, Tan ST, Scott WR, Campanella G, Chadeau-Hyam M, Afzal U, Ahluwalia TS, Bonder MJ, Chen P, Dehghan A, Edwards TL, Esko T, Go MJ, Harris SE, Hartiala J, Kasela S, Kasturiratne A, Khor CC, Kleber ME, Li H, Yu Mok Z, Nakatochi M, Sapari NS, Saxena R, Stewart AFR, Stolk L, Tabara Y, Teh AL, Wu Y, Wu JY, Zhang Y, Aits I, Da Silva Couto Alves A, Das S, Dorajoo R, Hopewell JC, Kim YK, Koivula RW, Luan J, Lyytikäinen LP, Nguyen QN, Pereira MA, Postmus I, Raitakari OT, Scannell Bryan M, Scott RA, Sorice R, Tragante V, Traglia M, White J, Yamamoto K, Zhang Y, Adair LS, Ahmed A, Akiyama K, Asif R, Aung T, Barroso I, Bjonnes A, Braun TR, Cai H, Chang LC, Chen CH, Cheng CY, Chong YS, Collins R, Courtney R, Davies G, Delgado G, Do LD, Doevendans PA, Gansevoort RT, Gao YT, Grammer TB, Grarup N, Grewal J, Gu D, Wander GS, Hartikainen AL, Hazen SL, He J, Heng CK, Hixson JE, Hofman A, Hsu C, Huang W, Husemoen LLN, Hwang JY, Ichihara S, Igase M, Isono M, Justesen JM, Katsuya T, Kibriya MG, Kim YJ, Kishimoto M, Koh WP, Kohara K, Kumari M, Kwek K, Lee NR, Lee J, Liao J, Lieb W, Liewald DCM, Matsubara T, Matsushita Y, Meitinger T, Mihailov E, Milani L, Mills R, Mononen N, Müller-Nurasyid M, Nabika T, Nakashima E, Ng HK, Nikus K, Nutile T, Ohkubo T, Ohnaka K, Parish S, Paternoster L, Peng H, Peters A, Pham ST, Pinidiyapathirage MJ, Rahman M, Rakugi H, Rolandsson O, Ann Rozario M, Ruggiero D, Sala CF, Sarju R, Shimokawa K, Snieder H, Sparsø T, Spiering W, Starr JM, Stott DJ, Stram DO, Sugiyama T, Szymczak S, Tang WHW, Tong L, Trompet S, Turjanmaa V, Ueshima H, Uitterlinden AG, Umemura S, Vaarasmaki M, van Dam RM, van Gilst WH, van Veldhuisen DJ, Viikari JS, Waldenberger M, Wang Y, Wang A, Wilson R, Wong TY, Xiang YB, Yamaguchi S, Ye X, Young RD, Young TL, Yuan JM, Zhou X, Asselbergs FW, Ciullo M, Clarke R, Deloukas P, Franke A, Franks PW, Franks S, Friedlander Y, Gross MD, Guo Z, Hansen T, Jarvelin MR, Jørgensen T, Jukema JW, Kähönen M, Kajio H, Kivimaki M, Lee JY, Lehtimäki T, Linneberg A, Miki T, Pedersen O, Samani NJ, Sørensen TIA, Takayanagi R, Toniolo D, BIOS-consortium, CARDIo GRAMplusCD, LifeLines Cohort Study, InterAct Consortium, Ahsan H, Allayee H, Chen YT, Danesh J, Deary IJ, Franco OH, Franke L, Heijman BT, Holbrook JD, Isaacs A, Kim BJ, Lin X, Liu J, März W, Metspalu A, Mohlke KL, Sanghera DK, Shu XO, van Meurs JBJ, Vithana E, Wickremasinghe AR, Wijmenga C, Wolffenbuttel BHW, Yokota M, Zheng W, Zhu D, Vineis P, Kyrtopoulos SA, Kleinjans JCS, McCarthy MI, Soong R, Gieger C, Scott J, Teo YY, He J, Elliott P, Tai ES, van der Harst P, Kooner JS, Chambers JC (2015) Nat Genet 47(11): 1282-1293
    › Primary publication · 26390057 (PubMed) · PMC4719169 (PubMed Central)
25. Multi-atlas learner fusion: An efficient segmentation approach for large-scale data. Asman AJ, Huo Y, Plassard AJ, Landman BA (2015) Med Image Anal 26(1): 82-91
    › Primary publication · 26363845 (PubMed) · PMC4679591 (PubMed Central)
26. Fine-scale mapping of the 4q24 locus identifies two independent loci associated with breast cancer risk. Guo X, Long J, Zeng C, Michailidou K, Ghoussaini M, Bolla MK, Wang Q, Milne RL, Shu XO, Cai Q, Beesley J, Kar SP, Andrulis IL, Anton-Culver H, Arndt V, Beckmann MW, Beeghly-Fadiel A, Benitez J, Blot W, Bogdanova N, Bojesen SE, Brauch H, Brenner H, Brinton L, Broeks A, Brüning T, Burwinkel B, Cai H, Canisius S, Chang-Claude J, Choi JY, Couch FJ, Cox A, Cross SS, Czene K, Darabi H, Devilee P, Droit A, Dörk T, Fasching PA, Fletcher O, Flyger H, Fostira F, Gaborieau V, García-Closas M, Giles GG, Grip M, Guénel P, Haiman CA, Hamann U, Hartman M, Hollestelle A, Hopper JL, Hsiung CN, Ito H, Jakubowska A, Johnson N, Kabisch M, Kang D, Khan S, Knight JA, Kosma VM, Lambrechts D, Le Marchand L, Li J, Lindblom A, Lophatananon A, Lubinski J, Mannermaa A, Manoukian S, Margolin S, Marme F, Matsuo K, McLean CA, Meindl A, Muir K, Neuhausen SL, Nevanlinna H, Nord S, Olson JE, Orr N, Peterlongo P, Putti TC, Rudolph A, Sangrajrang S, Sawyer EJ, Schmidt MK, Schmutzler RK, Shen CY, Shi J, Shrubsole MJ, Southey MC, Swerdlow A, Teo SH, Thienpont B, Toland AE, Tollenaar RA, Tomlinson IP, Truong T, Tseng CC, van den Ouweland A, Wen W, Winqvist R, Wu A, Yip CH, Zamora MP, Zheng Y, Hall P, Pharoah PD, Simard J, Chenevix-Trench G, kConFab Investigators, Dunning AM, Easton DF, Zheng W (2015) Cancer Epidemiol Biomarkers Prev 24(11): 1680-91
    › Primary publication · 26354892 (PubMed) · PMC4633342 (PubMed Central)
27. Height and Breast Cancer Risk: Evidence From Prospective Studies and Mendelian Randomization. Zhang B, Shu XO, Delahanty RJ, Zeng C, Michailidou K, Bolla MK, Wang Q, Dennis J, Wen W, Long J, Li C, Dunning AM, Chang-Claude J, Shah M, Perkins BJ, Czene K, Darabi H, Eriksson M, Bojesen SE, Nordestgaard BG, Nielsen SF, Flyger H, Lambrechts D, Neven P, Wildiers H, Floris G, Schmidt MK, Rookus MA, van den Hurk K, de Kort WL, Couch FJ, Olson JE, Hallberg E, Vachon C, Rudolph A, Seibold P, Flesch-Janys D, Peto J, Dos-Santos-Silva I, Fletcher O, Johnson N, Nevanlinna H, Muranen TA, Aittomäki K, Blomqvist C, Li J, Humphreys K, Brand J, Guénel P, Truong T, Cordina-Duverger E, Menegaux F, Burwinkel B, Marme F, Yang R, Surowy H, Benitez J, Zamora MP, Perez JI, Cox A, Cross SS, Reed MW, Andrulis IL, Knight JA, Glendon G, Tchatchou S, Sawyer EJ, Tomlinson I, Kerin MJ, Miller N, Chenevix-Trench G, kConFab Investigators, Australian Ovarian Study Group, Haiman CA, Henderson BE, Schumacher F, Marchand LL, Lindblom A, Margolin S, Hooning MJ, Martens JW, Tilanus-Linthorst MM, Collée JM, Hopper JL, Southey MC, Tsimiklis H, Apicella C, Slager S, Toland AE, Ambrosone CB, Yannoukakos D, Giles GG, Milne RL, McLean C, Fasching PA, Haeberle L, Ekici AB, Beckmann MW, Brenner H, Dieffenbach AK, Arndt V, Stegmaier C, Swerdlow AJ, Ashworth A, Orr N, Jones M, Figueroa J, Garcia-Closas M, Brinton L, Lissowska J, Dumont M, Winqvist R, Pylkäs K, Jukkola-Vuorinen A, Grip M, Brauch H, Brüning T, Ko YD, Peterlongo P, Manoukian S, Bonanni B, Radice P, Bogdanova N, Antonenkova N, Dörk T, Mannermaa A, Kataja V, Kosma VM, Hartikainen JM, Devilee P, Seynaeve C, Van Asperen CJ, Jakubowska A, Lubiński J, Jaworska-Bieniek K, Durda K, Hamann U, Torres D, Schmutzler RK, Neuhausen SL, Anton-Culver H, Kristensen VN, Grenaker Alnæs GI, DRIVE Project, Pierce BL, Kraft P, Peters U, Lindstrom S, Seminara D, Burgess S, Ahsan H, Whittemore AS, John EM, Gammon MD, Malone KE, Tessier DC, Vincent D, Bacot F, Luccarini C, Baynes C, Ahmed S, Maranian M, Healey CS, González-Neira A, Pita G, Alonso MR, Álvarez N, Herrero D, Pharoah PD, Simard J, Hall P, Hunter DJ, Easton DF, Zheng W (2015) J Natl Cancer Inst 107(11)
    › Primary publication · 26296642 (PubMed) · PMC4643630 (PubMed Central)
28. EGFR Kinase Domain Duplication (EGFR-KDD) Is a Novel Oncogenic Driver in Lung Cancer That Is Clinically Responsive to Afatinib. Gallant JN, Sheehan JH, Shaver TM, Bailey M, Lipson D, Chandramohan R, Red Brewer M, York SJ, Kris MG, Pietenpol JA, Ladanyi M, Miller VA, Ali SM, Meiler J, Lovly CM (2015) Cancer Discov 5(11): 1155-63
    › Primary publication · 26286086 (PubMed) · PMC4631701 (PubMed Central)
29. Genetic and chromosomal alterations in Kenyan Wilms Tumor. Lovvorn HN, Pierce J, Libes J, Li B, Wei Q, Correa H, Gouffon J, Clark PE, Axt JR, Hansen E, Newton M, O'Neill JA, Kenyan Wilms Tumor Consortium (2015) Genes Chromosomes Cancer 54(11): 702-15
    › Primary publication · 26274016 (PubMed) · PMC4567398 (PubMed Central)
30. Simultaneous control of error rates in fMRI data analysis. Kang H, Blume J, Ombao H, Badre D (2015) Neuroimage : 102-13
    › Primary publication · 26272730 (PubMed) · PMC4626324 (PubMed Central)
31. Chemoreceptor Evolution in Hymenoptera and Its Implications for the Evolution of Eusociality. Zhou X, Rokas A, Berger SL, Liebig J, Ray A, Zwiebel LJ (2015) Genome Biol Evol 7(8): 2407-16
    › Primary publication · 26272716 (PubMed) · PMC4558866 (PubMed Central)
32. Crowding in Visual Working Memory Reveals Its Spatial Resolution and the Nature of Its Representations. Tamber-Rosenau BJ, Fintzi AR, Marois R (2015) Psychol Sci 26(9): 1511-21
    › Primary publication · 26270073 (PubMed) · PMC4567493 (PubMed Central)
33. Fully Flexible Docking of Medium Sized Ligand Libraries with RosettaLigand. DeLuca S, Khar K, Meiler J (2015) PLoS One 10(7): e0132508
    › Primary publication · 26207742 (PubMed) · PMC4514752 (PubMed Central)
34. Genetic Determinants of Metabolism and Benign Prostate Enlargement: Associations with Prostate Volume. Giri A, Edwards TL, Motley SS, Byerly SH, Fowke JH (2015) PLoS One 10(7): e0132028
    › Primary publication · 26158673 (PubMed) · PMC4497718 (PubMed Central)
35. Design of Protein Multi-specificity Using an Independent Sequence Search Reduces the Barrier to Low Energy Sequences. Sevy AM, Jacobs TM, Crowe JE, Meiler J (2015) PLoS Comput Biol 11(7): e1004300
    › Primary publication · 26147100 (PubMed) · PMC4493036 (PubMed Central)
36. Platelet Inhibitors Reduce Rupture in a Mouse Model of Established Abdominal Aortic Aneurysm. Owens AP, Edwards TL, Antoniak S, Geddings JE, Jahangir E, Wei WQ, Denny JC, Boulaftali Y, Bergmeier W, Daugherty A, Sampson UKA, Mackman N (2015) Arterioscler Thromb Vasc Biol 35(9): 2032-2041
    › Primary publication · 26139462 (PubMed) · PMC4552620 (PubMed Central)
37. KRAS-dependent sorting of miRNA to exosomes. Cha DJ, Franklin JL, Dou Y, Liu Q, Higginbotham JN, Demory Beckler M, Weaver AM, Vickers K, Prasad N, Levy S, Zhang B, Coffey RJ, Patton JG (2015) Elife : e07197
    › Primary publication · 26132860 (PubMed) · PMC4510696 (PubMed Central)
38. Proteomic analysis of colon and rectal carcinoma using standard and customized databases. Slebos RJ, Wang X, Wang X, Wang X, Zhang B, Tabb DL, Liebler DC (2015) Sci Data : 150022
    › Primary publication · 26110064 (PubMed) · PMC4477697 (PubMed Central)
39. Outcome of the First wwPDB Hybrid/Integrative Methods Task Force Workshop. Sali A, Berman HM, Schwede T, Trewhella J, Kleywegt G, Burley SK, Markley J, Nakamura H, Adams P, Bonvin AM, Chiu W, Peraro MD, Di Maio F, Ferrin TE, Grünewald K, Gutmanas A, Henderson R, Hummer G, Iwasaki K, Johnson G, Lawson CL, Meiler J, Marti-Renom MA, Montelione GT, Nilges M, Nussinov R, Patwardhan A, Rappsilber J, Read RJ, Saibil H, Schröder GF, Schwieters CD, Seidel CA, Svergun D, Topf M, Ulrich EL, Velankar S, Westbrook JD (2015) Structure 23(7): 1156-67
    › Primary publication · 26095030 (PubMed) · PMC4933300 (PubMed Central)
40. Global, in situ, site-specific analysis of protein S-sulfenylation. Yang J, Gupta V, Tallman KA, Porter NA, Carroll KS, Liebler DC (2015) Nat Protoc 10(7): 1022-37
    › Primary publication · 26086405 (PubMed) · PMC4608369 (PubMed Central)
41. Efficient multi-atlas abdominal segmentation on clinically acquired CT with SIMPLE context learning. Xu Z, Burke RP, Lee CP, Baucom RB, Poulose BK, Abramson RG, Landman BA (2015) Med Image Anal 24(1): 18-27
    › Primary publication · 26046403 (PubMed) · PMC4532551 (PubMed Central)
42. Leveraging Identity-by-Descent for Accurate Genotype Inference in Family Sequencing Data. Li B, Wei Q, Zhan X, Zhong X, Chen W, Li C, Haines J (2015) PLoS Genet 11(6): e1005271
    › Primary publication · 26043085 (PubMed) · PMC4456389 (PubMed Central)
43. BCL::SAXS: GPU accelerated Debye method for computation of small angle X-ray scattering profiles. Putnam DK, Weiner BE, Woetzel N, Lowe EW, Meiler J (2015) Proteins 83(8): 1500-12
    › Primary publication · 26018949 (PubMed) · PMC4797635 (PubMed Central)
44. Vanderbilt University Institute of Imaging Science Center for Computational Imaging XNAT: A multimodal data archive and processing environment. Harrigan RL, Yvernault BC, Boyd BD, Damon SM, Gibney KD, Conrad BN, Phillips NS, Rogers BP, Gao Y, Landman BA (2016) Neuroimage 124(Pt B): 1097-1101
    › Primary publication · 25988229 (PubMed) · PMC4646735 (PubMed Central)
45. Protein structure prediction guided by crosslinking restraints--A systematic evaluation of the impact of the crosslinking spacer length. Hofmann T, Fischer AW, Meiler J, Kalkhof S (2015) Methods : 79-90
    › Primary publication · 25986934 (PubMed) · PMC4803439 (PubMed Central)
46. Widespread white matter but focal gray matter alterations in depressed individuals with thoughts of death. Taylor WD, Boyd B, McQuoid DR, Kudra K, Saleh A, MacFall JR (2015) Prog Neuropsychopharmacol Biol Psychiatry : 22-8
    › Primary publication · 25963377 (PubMed) · PMC4458419 (PubMed Central)
47. Activating PIK3CA Mutations Induce an Epidermal Growth Factor Receptor (EGFR)/Extracellular Signal-regulated Kinase (ERK) Paracrine Signaling Axis in Basal-like Breast Cancer. Young CD, Zimmerman LJ, Hoshino D, Formisano L, Hanker AB, Gatza ML, Morrison MM, Moore PD, Whitwell CA, Dave B, Stricker T, Bhola NE, Silva GO, Patel P, Brantley-Sieders DM, Levin M, Horiates M, Palma NA, Wang K, Stephens PJ, Perou CM, Weaver AM, O'Shaughnessy JA, Chang JC, Park BH, Liebler DC, Cook RS, Arteaga CL (2015) Mol Cell Proteomics 14(7): 1959-76
    › Primary publication · 25953087 (PubMed) · PMC4587316 (PubMed Central)
48. Unwinding of the C-Terminal Residues of Neuropeptide Y is critical for Y₂ Receptor Binding and Activation. Kaiser A, Müller P, Zellmann T, Scheidt HA, Thomas L, Bosse M, Meier R, Meiler J, Huster D, Beck-Sickinger AG, Schmidt P (2015) Angew Chem Int Ed Engl 54(25): 7446-9
    › Primary publication · 25924821 (PubMed) · PMC5497120 (PubMed Central)
49. Integrating histology and MRI in the first digital brain of common squirrel monkey, . Sun P, Parvathaneni P, Schilling KG, Gao Y, Janve V, Anderson A, Landman BA (2015) Proc SPIE Int Soc Opt Eng
    › Primary publication · 25914510 (PubMed) · PMC4405811 (PubMed Central)
50. Multi-Atlas Segmentation for Abdominal Organs with Gaussian Mixture Models. Burke RP, Xu Z, Lee CP, Baucom RB, Poulose BK, Abramson RG, Landman BA (2015) Proc SPIE Int Soc Opt Eng
    › Primary publication · 25914508 (PubMed) · PMC4405670 (PubMed Central)
51. Toward Content Based Image Retrieval with Deep Convolutional Neural Networks. Sklan JE, Plassard AJ, Fabbri D, Landman BA (2015) Proc SPIE Int Soc Opt Eng
    › Primary publication · 25914507 (PubMed) · PMC4405657 (PubMed Central)
52. Efficient Abdominal Segmentation on Clinically Acquired CT with SIMPLE Context Learning. Xu Z, Burke RP, Lee CP, Baucom RB, Poulose BK, Abramson RG, Landman BA (2015) Proc SPIE Int Soc Opt Eng
    › Primary publication · 25914506 (PubMed) · PMC4405802 (PubMed Central)
53. Constructing a statistical atlas of the radii of the optic nerve and cerebrospinal fluid sheath in young healthy adults. Harrigan RL, Plassard AJ, Mawn LA, Galloway RL, Smith SA, Landman BA (2015) Proc SPIE Int Soc Opt Eng
    › Primary publication · 25914505 (PubMed) · PMC4405797 (PubMed Central)
54. Revealing Latent Value of Clinically Acquired CTs of Traumatic Brain Injury Through Multi-Atlas Segmentation in a Retrospective Study of 1,003 with External Cross-Validation. Plassard AJ, Kelly PD, Asman AJ, Kang H, Patel MB, Landman BA (2015) Proc SPIE Int Soc Opt Eng
    › Primary publication · 25914504 (PubMed) · PMC4405676 (PubMed Central)
55. Evaluation of Atlas-Based White Matter Segmentation with Eve. Plassard AJ, Hinton KE, Venkatraman V, Gonzalez C, Resnick SM, Landman BA (2015) Proc SPIE Int Soc Opt Eng
    › Primary publication · 25914503 (PubMed) · PMC4405655 (PubMed Central)
56. Evaluation of Five Image Registration Tools for Abdominal CT: Pitfalls and Opportunities with Soft Anatomy. Lee CP, Xu Z, Burke RP, Baucom RB, Poulose BK, Abramson RG, Landman BA (2015) Proc SPIE Int Soc Opt Eng
    › Primary publication · 25914502 (PubMed) · PMC4405654 (PubMed Central)
57. Evolution of lysine acetylation in the RNA polymerase II C-terminal domain. Simonti CN, Pollard KS, Schröder S, He D, Bruneau BG, Ott M, Capra JA (2015) BMC Evol Biol : 35
    › Primary publication · 25887984 (PubMed) · PMC4362643 (PubMed Central)
58. Perspective on computational and structural aspects of kinase discovery from IPK2014. Martin E, Knapp S, Engh RA, Moebitz H, Varin T, Roux B, Meiler J, Berdini V, Baumann A, Vieth M (2015) Biochim Biophys Acta 1854(10 Pt B): 1595-604
    › Primary publication · 25861861 (PubMed) · PMC5105597 (PubMed Central)
59. Personalized biochemistry and biophysics. Kroncke BM, Vanoye CG, Meiler J, George AL, Sanders CR (2015) Biochemistry 54(16): 2551-9
    › Primary publication · 25856502 (PubMed) · PMC4415889 (PubMed Central)
60. BCL::MP-fold: Membrane protein structure prediction guided by EPR restraints. Fischer AW, Alexander NS, Woetzel N, Karakas M, Weiner BE, Meiler J (2015) Proteins 83(11): 1947-62
    › Primary publication · 25820805 (PubMed) · PMC5064833 (PubMed Central)
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