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Amy-Joan Ham
Faculty Member

Amy-Joan Ham

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Publications

The following timeline graph is generated from all co-authored publications.

Most recent publication(s) are shown below:

  1. IDPQuantify: combining precursor intensity with spectral counts for protein and peptide quantification. Chen YY, Chambers MC, Li M, Ham AJ, Turner JL, Zhang B, Tabb DL (2013) J Proteome Res 12(9): 4111-21
    › Primary publication · 23879310 (PubMed) · PMC3804902 (PubMed Central)
  2. Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS. Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ (2013) Mol Cell Proteomics 12(2): 343-55
    › Primary publication · 23161513 (PubMed) · PMC3567858 (PubMed Central)
  3. Proteomic profiling of paraffin-embedded samples identifies metaplasia-specific and early-stage gastric cancer biomarkers. Sousa JF, Ham AJ, Whitwell C, Nam KT, Lee HJ, Yang HK, Kim WH, Zhang B, Li M, LaFleur B, Liebler DC, Goldenring JR (2012) Am J Pathol 181(5): 1560-72
    › Primary publication · 22944598 (PubMed) · PMC3483808 (PubMed Central)
  4. TagRecon: high-throughput mutation identification through sequence tagging. Dasari S, Chambers MC, Slebos RJ, Zimmerman LJ, Ham AJ, Tabb DL (2010) J Proteome Res 9(4): 1716-26
    › Primary publication · 20131910 (PubMed) · PMC2859315 (PubMed Central)
  5. Repeatability and reproducibility in proteomic identifications by liquid chromatography-tandem mass spectrometry. Tabb DL, Vega-Montoto L, Rudnick PA, Variyath AM, Ham AJ, Bunk DM, Kilpatrick LE, Billheimer DD, Blackman RK, Cardasis HL, Carr SA, Clauser KR, Jaffe JD, Kowalski KA, Neubert TA, Regnier FE, Schilling B, Tegeler TJ, Wang M, Wang P, Whiteaker JR, Zimmerman LJ, Fisher SJ, Gibson BW, Kinsinger CR, Mesri M, Rodriguez H, Stein SE, Tempst P, Paulovich AG, Liebler DC, Spiegelman C (2010) J Proteome Res 9(2): 761-76
    › Primary publication · 19921851 (PubMed) · PMC2818771 (PubMed Central)
  6. Characterization of chemokine receptor CXCR2 interacting proteins using a proteomics approach to define the CXCR2 "chemosynapse". Raman D, Neel NF, Sai J, Mernaugh RL, Ham AJ, Richmond AJ (2009) Methods Enzymol : 315-30
    › Primary publication · 19446732 (PubMed) · PMC3140414 (PubMed Central)
  7. Microtubule-dependent association of AKAP350A and CCAR1 with RNA stress granules. Kolobova E, Efimov A, Kaverina I, Rishi AK, Schrader JW, Ham AJ, Larocca MC, Goldenring JR (2009) Exp Cell Res 315(3): 542-55
    › Primary publication · 19073175 (PubMed) · PMC2788823 (PubMed Central)

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Keywords & MeSH Terms

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Key: MeSH Term Keyword

Arsenites Biomarkers, Tumor Cell Proliferation Clusterin Colonic Neoplasms Computational Biology Cytoplasmic Granules Databases, Protein Data Mining Disease Progression DNA Mismatch Repair Extracellular Matrix Fungal Proteins HeLa Cells Models, Biological Neoplasm Invasiveness Neoplasm Staging Nocodazole Paraffin Embedding Peptide Fragments Peptides Proteins Proteome Proteomics ras Proteins RNA Recognition Motif Proteins Tandem Mass Spectrometry Trefoil Factor-2 Tumor Microenvironment Yeasts