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Creative Data Solutions (CDS) is a Vanderbilt Shared Resource and has extensive experience in providing effective and robust solutions to challenges pertaining to research data using modern informatics and bioinformatics approaches.
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- Alport's syndrome, Goodpasture's syndrome, and type IV collagen.
Hudson BG, Tryggvason K, Sundaramoorthy M, Neilson EG
(2003) N Engl J Med 348: 2543-56 - The use of molecular profiling to predict survival after chemotherapy for diffuse large-B-cell lymphoma.
Rosenwald A, Wright G, Chan WC, Connors JM, Campo E, Fisher RI, Gascoyne RD, Muller-Hermelink HK, Smeland EB, Giltnane JM, Hurt EM, Zhao H, Averett L, Yang L, Wilson WH, Jaffe ES, Simon R, Klausner RD, Powell J, Duffey PL, Longo DL, Greiner TC, Weisenburger DD, Sanger WG, Dave BJ, Lynch JC, Vose J, Armitage JO, Montserrat E, López-Guillermo A, Grogan TM, Miller TP, LeBlanc M, Ott G, Kvaloy S, Delabie J, Holte H, Krajci P, Stokke T, Staudt LM, Lymphoma/Leukemia Molecular Profiling Project
(2002) N Engl J Med 346: 1937-47 - Regression of cirrhosis during treatment with tenofovir disoproxil fumarate for chronic hepatitis B: a 5-year open-label follow-up study.
Marcellin P, Gane E, Buti M, Afdhal N, Sievert W, Jacobson IM, Washington MK, Germanidis G, Flaherty JF, Aguilar Schall R, Bornstein JD, Kitrinos KM, Subramanian GM, McHutchison JG, Heathcote EJ
(2013) Lancet 381: 468-75 - Proliferative breast disease: diagnosis and implications.
Page DL, Dupont WD
(1991) Science 253: 915-6 - Liquid biopsies reveal the dynamic nature of resistance mechanisms in solid tumors.
Meador CB, Lovly CM
(2015) Nat Med 21: 663-5 - Quantitative measurement of epidermal growth factor receptor is a negative predictive factor for tamoxifen response in hormone receptor positive premenopausal breast cancer.
Giltnane JM, Rydén L, Cregger M, Bendahl PO, Jirström K, Rimm DL
(2007) J Clin Oncol 25: 3007-14 - Clinicopathologic predictors of sentinel lymph node metastasis in thin melanoma.
Han D, Zager JS, Shyr Y, Chen H, Berry LD, Iyengar S, Djulbegovic M, Weber JL, Marzban SS, Sondak VK, Messina JL, Vetto JT, White RL, Pockaj B, Mozzillo N, Charney KJ, Avisar E, Krouse R, Kashani-Sabet M, Leong SP
(2013) J Clin Oncol 31: 4387-93 - Ductal lavage for detection of cellular atypia in women at high risk for breast cancer.
Dooley WC, Ljung BM, Veronesi U, Cazzaniga M, Elledge RM, O'Shaughnessy JA, Kuerer HM, Hung DT, Khan SA, Phillips RF, Ganz PA, Euhus DM, Esserman LJ, Haffty BG, King BL, Kelley MC, Anderson MM, Schmit PJ, Clark RR, Kass FC, Anderson BO, Troyan SL, Arias RD, Quiring JN, Love SM, Page DL, King EB
(2001) J Natl Cancer Inst 93: 1624-32 - Prostate cancer and the Will Rogers phenomenon.
Albertsen PC, Hanley JA, Barrows GH, Penson DF, Kowalczyk PD, Sanders MM, Fine J
(2005) J Natl Cancer Inst 97: 1248-53 - Intestinal bypass and urine oxalate.
Golper TA, Harris HF, Houghton DC
(1979) Ann Intern Med 91: 129-30 - Pediatric patients with dyspepsia have chronic symptoms, anxiety, and lower quality of life as adolescents and adults.
Rippel SW, Acra S, Correa H, Vaezi M, Di Lorenzo C, Walker LS
(2012) Gastroenterology 142: 754-61 - Spotlight: Gastric Intestinal Metaplasia.
Shah SC, Gupta S, Li D, Morgan D, Mustafa RA, Gawron AJ
(2020) Gastroenterology 158: 704 - Proteolytic cleavage and loss of function of biologic agents that neutralize tumor necrosis factor in the mucosa of patients with inflammatory bowel disease.
Biancheri P, Brezski RJ, Di Sabatino A, Greenplate AR, Soring KL, Corazza GR, Kok KB, Rovedatti L, Vossenkämper A, Ahmad N, Snoek SA, Vermeire S, Rutgeerts P, Jordan RE, MacDonald TT
(2015) Gastroenterology 149: 1564-1574.e3 - Histologic Subtyping of Gastric Intestinal Metaplasia: Overview and Considerations for Clinical Practice.
Shah SC, Gawron AJ, Mustafa RA, Piazuelo MB
(2020) Gastroenterology 158: 745-750 - No Association Between Pseudopolyps and Colorectal Neoplasia in Patients With Inflammatory Bowel Diseases.
Mahmoud R, Shah SC, Ten Hove JR, Torres J, Mooiweer E, Castaneda D, Glass J, Elman J, Kumar A, Axelrad J, Ullman T, Colombel JF, Oldenburg B, Itzkowitz SH, Dutch Initiative on Crohn and Colitis
(2019) Gastroenterology 156: 1333-1344.e3 - Advancing the Science in Gastric Pre-Neoplasia: Study Design Considerations.
Davitkov P, Altayar O, Shah SC, Gawron AJ, Mustafa RA, Sultan S, Morgan DR
(2020) Gastroenterology 158: 751-759 - Abnormal initiation and conduction of slow-wave activity in gastroparesis, defined by high-resolution electrical mapping.
O'Grady G, Angeli TR, Du P, Lahr C, Lammers WJEP, Windsor JA, Abell TL, Farrugia G, Pullan AJ, Cheng LK
(2012) Gastroenterology 143: 589-598.e3 - MEK Inhibitor Reverses Metaplasia and Allows Re-Emergence of Normal Lineages in Helicobacter pylori-Infected Gerbils.
Yang Q, Yasuda T, Choi E, Toyoda T, Roland JT, Uchida E, Yoshida H, Seto Y, Goldenring JR, Nomura S
(2019) Gastroenterology 156: 577-581.e4 - Inverse association of esophageal eosinophilia with Helicobacter pylori based on analysis of a US pathology database.
Dellon ES, Peery AF, Shaheen NJ, Morgan DR, Hurrell JM, Lash RH, Genta RM
(2011) Gastroenterology 141: 1586-92 - Inflammation and intestinal metaplasia of the distal esophagus are associated with alterations in the microbiome.
Yang L, Lu X, Nossa CW, Francois F, Peek RM, Pei Z
(2009) Gastroenterology 137: 588-97 - AGA Technical Review on Gastric Intestinal Metaplasia-Natural History and Clinical Outcomes.
Gawron AJ, Shah SC, Altayar O, Davitkov P, Morgan D, Turner K, Mustafa RA
(2020) Gastroenterology 158: 705-731.e5 - Pathology of rodent models of intestinal cancer: progress report and recommendations.
Washington MK, Powell AE, Sullivan R, Sundberg JP, Wright N, Coffey RJ, Dove WF
(2013) Gastroenterology 144: 705-17 - Helicobacter pylori Lewis expression is related to the host Lewis phenotype.
Wirth HP, Yang M, Peek RM, Tham KT, Blaser MJ
(1997) Gastroenterology 113: 1091-8 - A calpain-10 gene polymorphism is associated with reduced muscle mRNA levels and insulin resistance.
Baier LJ, Permana PA, Yang X, Pratley RE, Hanson RL, Shen GQ, Mott D, Knowler WC, Cox NJ, Horikawa Y, Oda N, Bell GI, Bogardus C
(2000) J Clin Invest 106: R69-73 - The significance of microabscesses in liver transplant biopsies: a clinicopathological study.
Lamps LW, Pinson CW, Raiford DS, Shyr Y, Scott MA, Washington MK
(1998) Hepatology 28: 1532-7 - Decreased adenylate cyclase activity and expression of Gs alpha in human myocardium after orthotopic cardiac transplantation.
Loh E, Barnett JV, Feldman AM, Couper GS, Vatner DE, Colucci WS, Galper JB
(1995) Circ Res 76: 852-60 - Biochemical analysis of caudate nucleus biopsy samples from parkinsonian patients.
Goldstein M, Lieberman AN, Helmer E, Koslow M, Ransohoff J, Elsworth JD, Roth RH, Deutch AY
(1988) Ann Neurol 24: 685-8 - Extensive phenotyping of individuals at risk for familial interstitial pneumonia reveals clues to the pathogenesis of interstitial lung disease.
Kropski JA, Pritchett JM, Zoz DF, Crossno PF, Markin C, Garnett ET, Degryse AL, Mitchell DB, Polosukhin VV, Rickman OB, Choi L, Cheng DS, McConaha ME, Jones BR, Gleaves LA, McMahon FB, Worrell JA, Solus JF, Ware LB, Lee JW, Massion PP, Zaynagetdinov R, White ES, Kurtis JD, Johnson JE, Groshong SD, Lancaster LH, Young LR, Steele MP, Phillips Iii JA, Cogan JD, Loyd JE, Lawson WE, Blackwell TS
(2015) Am J Respir Crit Care Med 191: 417-26 - From clinical and pathologic to molecular staging of lung cancer.
Massion PP, Carbone DP
(2003) Am J Respir Crit Care Med 167: 1587-8 - Characterization of fibroblast-specific protein 1 in pulmonary fibrosis.
Lawson WE, Polosukhin VV, Zoia O, Stathopoulos GT, Han W, Plieth D, Loyd JE, Neilson EG, Blackwell TS
(2005) Am J Respir Crit Care Med 171: 899-907 - Pulmonary veno-occlusive disease caused by an inherited mutation in bone morphogenetic protein receptor II.
Runo JR, Vnencak-Jones CL, Prince M, Loyd JE, Wheeler L, Robbins IM, Lane KB, Newman JH, Johnson J, Nichols WC, Phillips JA
(2003) Am J Respir Crit Care Med 167: 889-94 - Transbronchial Cryobiopsy Can Diagnose Constrictive Bronchiolitis in Veterans of Recent Conflicts in the Middle East.
Lentz RJ, Fessel JP, Johnson JE, Maldonado F, Miller RF, Rickman OB
(2016) Am J Respir Crit Care Med 193: 806-8 - Is Endobronchial Ultrasound Influenced by Sedation Strategy? Comparing Apples to Apples.
Sasieta H, Mandrekar J, Maldonado F
(2015) Am J Respir Crit Care Med 191: 1469-70 - Early involvement of the phosphatidylinositol 3-kinase/Akt pathway in lung cancer progression.
Massion PP, Taflan PM, Shyr Y, Rahman SM, Yildiz P, Shakthour B, Edgerton ME, Ninan M, Andersen JJ, Gonzalez AL
(2004) Am J Respir Crit Care Med 170: 1088-94 - Phylogeographic origin of Helicobacter pylori is a determinant of gastric cancer risk.
de Sablet T, Piazuelo MB, Shaffer CL, Schneider BG, Asim M, Chaturvedi R, Bravo LE, Sicinschi LA, Delgado AG, Mera RM, Israel DA, Romero-Gallo J, Peek RM, Cover TL, Correa P, Wilson KT
(2011) Gut 60: 1189-95 - Distinguishing Ménétrier's disease from its mimics.
Rich A, Toro TZ, Tanksley J, Fiske WH, Lind CD, Ayers GD, Piessevaux H, Washington MK, Coffey RJ
(2010) Gut 59: 1617-24 - Alcohol intake increases high-grade prostate cancer risk among men taking dutasteride in the REDUCE trial.
Fowke JH, Howard L, Andriole GL, Freedland SJ
(2014) Eur Urol 66: 1133-8 - Novel poxvirus infection in 2 patients from the United States.
Osadebe LU, Manthiram K, McCollum AM, Li Y, Emerson GL, Gallardo-Romero NF, Doty JB, Wilkins K, Zhao H, Drew CP, Metcalfe MG, Goldsmith CS, Muehlenbachs A, Googe PB, Dunn J, Duenckel T, Henderson H, Carroll DS, Zaki SR, Denison MR, Reynolds MG, Damon IK
(2015) Clin Infect Dis 60: 195-202 - 5-Hydroxytryptamine drives apoptosis in biopsylike Burkitt lymphoma cells: reversal by selective serotonin reuptake inhibitors.
Serafeim A, Grafton G, Chamba A, Gregory CD, Blakely RD, Bowery NG, Barnes NM, Gordon J
(2002) Blood 99: 2545-53
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