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•  David Piston

•  Karen Joos

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Publications

• MALDI imaging of lipid biochemistry in tissues by mass spectrometry.
  Berry KA, Hankin JA, Barkley RM, Spraggins JM, Caprioli RM, Murphy RC
  (2011) Chem Rev 111: 6491-512
• Analysis of tissue specimens by matrix-assisted laser desorption/ionization imaging mass spectrometry in biological and clinical research.
  Norris JL, Caprioli RM
  (2013) Chem Rev 113: 2309-42
• Proteomic patterns of tumour subsets in non-small-cell lung cancer.
  Yanagisawa K, Shyr Y, Xu BJ, Massion PP, Larsen PH, White BC, Roberts JR, Edgerton M, Gonzalez A, Nadaf S, Moore JH, Caprioli RM, Carbone DP
  (2003) Lancet 362: 433-9
• Crystal structure of rhodopsin bound to arrestin by femtosecond X-ray laser.
  Kang Y, Zhou XE, Gao X, He Y, Liu W, Ishchenko A, Barty A, White TA, Yefanov O, Han GW, Xu Q, de Waal PW, Ke J, Tan MH, Zhang C, Moeller A, West GM, Pascal BD, Van Eps N, Caro LN, Vishnivetskiy SA, Lee RJ, Suino-Powell KM, Gu X, Pal K, Ma J, Zhi X, Boutet S, Williams GJ, Messerschmidt M, Gati C, Zatsepin NA, Wang D, James D, Basu S, Roy-Chowdhury S, Conrad CE, Coe J, Liu H, Lisova S, Kupitz C, Grotjohann I, Fromme R, Jiang Y, Tan M, Yang H, Li J, Wang M, Zheng Z, Li D, Howe N, Zhao Y, Standfuss J, Diederichs K, Dong Y, Potter CS, Carragher B, Caffrey M, Jiang H, Chapman HN, Spence JC, Fromme P, Weierstall U, Ernst OP, Katritch V, Gurevich VV, Griffin PR, Hubbell WL, Stevens RC, Cherezov V, Melcher K, Xu HE
  (2015) Nature 523: 561-7
• Molecular imaging by mass spectrometry--looking beyond classical histology.
  Schwamborn K, Caprioli RM
  (2010) Nat Rev Cancer 10: 639-46
• Simple, Scalable Proteomic Imaging for High-Dimensional Profiling of Intact Systems.
  Murray E, Cho JH, Goodwin D, Ku T, Swaney J, Kim SY, Choi H, Park YG, Park JY, Hubbert A, McCue M, Vassallo S, Bakh N, Frosch MP, Wedeen VJ, Seung HS, Chung K
  (2015) Cell 163: 1500-14
• Natural ligand of mouse CD1d1: cellular glycosylphosphatidylinositol.
  Joyce S, Woods AS, Yewdell JW, Bennink JR, De Silva AD, Boesteanu A, Balk SP, Cotter RJ, Brutkiewicz RR
  (1998) Science 279: 1541-4
• Forces for morphogenesis investigated with laser microsurgery and quantitative modeling.
  Hutson MS, Tokutake Y, Chang MS, Bloor JW, Venakides S, Kiehart DP, Edwards GS
  (2003) Science 300: 145-9
• Using multiplexed assays of oncogenic drivers in lung cancers to select targeted drugs.
  Kris MG, Johnson BE, Berry LD, Kwiatkowski DJ, Iafrate AJ, Wistuba II, Varella-Garcia M, Franklin WA, Aronson SL, Su PF, Shyr Y, Camidge DR, Sequist LV, Glisson BS, Khuri FR, Garon EB, Pao W, Rudin C, Schiller J, Haura EB, Socinski M, Shirai K, Chen H, Giaccone G, Ladanyi M, Kugler K, Minna JD, Bunn PA
  (2014) JAMA 311: 1998-2006
• MALDI imaging mass spectrometry: molecular snapshots of biochemical systems.
  Cornett DS, Reyzer ML, Chaurand P, Caprioli RM
  (2007) Nat Methods 4: 828-33
• Integrating spatially resolved three-dimensional MALDI IMS with in vivo magnetic resonance imaging.
  Sinha TK, Khatib-Shahidi S, Yankeelov TE, Mapara K, Ehtesham M, Cornett DS, Dawant BM, Caprioli RM, Gore JC
  (2008) Nat Methods 5: 57-9
• Imaging mass spectrometry: a new technology for the analysis of protein expression in mammalian tissues.
  Stoeckli M, Chaurand P, Hallahan DE, Caprioli RM
  (2001) Nat Med 7: 493-6
• Mass spectrometry to classify non-small-cell lung cancer patients for clinical outcome after treatment with epidermal growth factor receptor tyrosine kinase inhibitors: a multicohort cross-institutional study.
  Taguchi F, Solomon B, Gregorc V, Roder H, Gray R, Kasahara K, Nishio M, Brahmer J, Spreafico A, Ludovini V, Massion PP, Dziadziuszko R, Schiller J, Grigorieva J, Tsypin M, Hunsucker SW, Caprioli R, Duncan MW, Hirsch FR, Bunn PA, Carbone DP
  (2007) J Natl Cancer Inst 99: 838-46
• Optically driven resonance of nanoscale flexural oscillators in liquid.
  Verbridge SS, Bellan LM, Parpia JM, Craighead HG
  (2006) Nano Lett 6: 2109-14
• Working towards an exegesis for lipids in biology.
  Brown HA, Murphy RC
  (2009) Nat Chem Biol 5: 602-6
• Signal Transducer and Activator of Transcription 3, Mediated Remodeling of the Tumor Microenvironment Results in Enhanced Tumor Drug Delivery in a Mouse Model of Pancreatic Cancer.
  Nagathihalli NS, Castellanos JA, Shi C, Beesetty Y, Reyzer ML, Caprioli R, Chen X, Walsh AJ, Skala MC, Moses HL, Merchant NB
  (2015) Gastroenterology 149: 1932-1943.e9
• Smad4-mediated signaling inhibits intestinal neoplasia by inhibiting expression of β-catenin.
  Freeman TJ, Smith JJ, Chen X, Washington MK, Roland JT, Means AL, Eschrich SA, Yeatman TJ, Deane NG, Beauchamp RD
  (2012) Gastroenterology 142: 562-571.e2
• Monitoring the inflammatory response to infection through the integration of MALDI IMS and MRI.
  Attia AS, Schroeder KA, Seeley EH, Wilson KJ, Hammer ND, Colvin DC, Manier ML, Nicklay JJ, Rose KL, Gore JC, Caprioli RM, Skaar EP
  (2012) Cell Host Microbe 11: 664-73
• Proteomic patterns of preinvasive bronchial lesions.
  Rahman SM, Shyr Y, Yildiz PB, Gonzalez AL, Li H, Zhang X, Chaurand P, Yanagisawa K, Slovis BS, Miller RF, Ninan M, Miller YE, Franklin WA, Caprioli RM, Carbone DP, Massion PP
  (2005) Am J Respir Crit Care Med 172: 1556-62
• Heterogeneity in mouse spasmolytic polypeptide-expressing metaplasia lineages identifies markers of metaplastic progression.
  Weis VG, Sousa JF, LaFleur BJ, Nam KT, Weis JA, Finke PE, Ameen NA, Fox JG, Goldenring JR
  (2013) Gut 62: 1270-9
• Base-displaced intercalated structure of the food mutagen 2-amino-3-methylimidazo[4,5-f]quinoline in the recognition sequence of the NarI restriction enzyme, a hotspot for -2 bp deletions.
  Wang F, DeMuro NE, Elmquist CE, Stover JS, Rizzo CJ, Stone MP
  (2006) J Am Chem Soc 128: 10085-95
• Lysine peroxycarbamates: free radical-promoted peptide cleavage.
  Masterson DS, Yin H, Chacon A, Hachey DL, Norris JL, Porter NA
  (2004) J Am Chem Soc 126: 720-1
• The innate immune protein calprotectin promotes Pseudomonas aeruginosa and Staphylococcus aureus interaction.
  Wakeman CA, Moore JL, Noto MJ, Zhang Y, Singleton MD, Prentice BM, Gilston BA, Doster RS, Gaddy JA, Chazin WJ, Caprioli RM, Skaar EP
  (2016) Nat Commun 7: 11951
• Molecular imaging of proteins in tissues by mass spectrometry.
  Seeley EH, Caprioli RM
  (2008) Proc Natl Acad Sci U S A 105: 18126-31
• exhibits heterogeneous siderophore production within the vertebrate host.
  Perry WJ, Spraggins JM, Sheldon JR, Grunenwald CM, Heinrichs DE, Cassat JE, Skaar EP, Caprioli RM
  (2019) Proc Natl Acad Sci U S A 116: 21980-21982
• Gamma 2 subunit of G protein heterotrimer is an N-end rule ubiquitylation substrate.
  Hamilton MH, Cook LA, McRackan TR, Schey KL, Hildebrandt JD
  (2003) Proc Natl Acad Sci U S A 100: 5081-6
• MALDI imaging mass spectrometry of human tissue: method challenges and clinical perspectives.
  Seeley EH, Caprioli RM
  (2011) Trends Biotechnol 29: 136-43
• Protein identification strategies in MALDI imaging mass spectrometry: a brief review.
  Ryan DJ, Spraggins JM, Caprioli RM
  (2019) Curr Opin Chem Biol 48: 64-72
• Imaging mass spectrometry: a new tool to investigate the spatial organization of peptides and proteins in mammalian tissue sections.
  Chaurand P, Schwartz SA, Caprioli RM
  (2002) Curr Opin Chem Biol 6: 676-81
• MALDI-MS-based imaging of small molecules and proteins in tissues.
  Reyzer ML, Caprioli RM
  (2007) Curr Opin Chem Biol 11: 29-35
• Early changes in protein expression detected by mass spectrometry predict tumor response to molecular therapeutics.
  Reyzer ML, Caldwell RL, Dugger TC, Forbes JT, Ritter CA, Guix M, Arteaga CL, Caprioli RM
  (2004) Cancer Res 64: 9093-100
• Proteomic-based prognosis of brain tumor patients using direct-tissue matrix-assisted laser desorption ionization mass spectrometry.
  Schwartz SA, Weil RJ, Thompson RC, Shyr Y, Moore JH, Toms SA, Johnson MD, Caprioli RM
  (2005) Cancer Res 65: 7674-81
• Inhibition of the sodium/potassium ATPase impairs N-glycan expression and function.
  Beheshti Zavareh R, Lau KS, Hurren R, Datti A, Ashline DJ, Gronda M, Cheung P, Simpson CD, Liu W, Wasylishen AR, Boutros PC, Shi H, Vengopal A, Jurisica I, Penn LZ, Reinhold VN, Ezzat S, Wrana J, Rose DR, Schachter H, Dennis JW, Schimmer AD
  (2008) Cancer Res 68: 6688-97
• A probasin-large T antigen transgenic mouse line develops prostate adenocarcinoma and neuroendocrine carcinoma with metastatic potential.
  Masumori N, Thomas TZ, Chaurand P, Case T, Paul M, Kasper S, Caprioli RM, Tsukamoto T, Shappell SB, Matusik RJ
  (2001) Cancer Res 61: 2239-49
• Lung cancer diagnosis from proteomic analysis of preinvasive lesions.
  Rahman SM, Gonzalez AL, Li M, Seeley EH, Zimmerman LJ, Zhang XJ, Manier ML, Olson SJ, Shah RN, Miller AN, Putnam JB, Miller YE, Franklin WA, Blot WJ, Carbone DP, Shyr Y, Caprioli RM, Massion PP
  (2011) Cancer Res 71: 3009-17
• Matrix-assisted laser desorption/ionization imaging mass spectrometry for the investigation of proteins and peptides.
  Burnum KE, Frappier SL, Caprioli RM
  (2008) Annu Rev Anal Chem (Palo Alto Calif) 1: 689-705
• Proteomic analysis of human metaphase chromosomes reveals topoisomerase II alpha as an Aurora B substrate.
  Morrison C, Henzing AJ, Jensen ON, Osheroff N, Dodson H, Kandels-Lewis SE, Adams RR, Earnshaw WC
  (2002) Nucleic Acids Res 30: 5318-27
• Advanced mass spectrometry technologies for the study of microbial pathogenesis.
  Moore JL, Caprioli RM, Skaar EP
  (2014) Curr Opin Microbiol 19: 45-51
• Plasma and cavitation dynamics during pulsed laser microsurgery in vivo.
  Hutson MS, Ma X
  (2007) Phys Rev Lett 99: 158104
• Imaging mass spectrometry reveals direct albumin fragmentation within the diabetic kidney.
  Grove KJ, Lareau NM, Voziyan PA, Zeng F, Harris RC, Hudson BG, Caprioli RM
  (2018) Kidney Int 94: 292-302