1. Mutations in early follicular lymphoma progenitors are associated with suppressed antigen presentation. Green MR, Kihira S, Liu CL, Nair RV, Salari R, Gentles AJ, Irish J, Stehr H, Vicente-Dueñas C, Romero-Camarero I, Sanchez-Garcia I, Plevritis SK, Arber DA, Batzoglou S, Levy R, Alizadeh AA (2015) Proc Natl Acad Sci U S A 112(10): E1116-25
    › Primary publication · 25713363 (PubMed) · PMC4364211 (PubMed Central)
  2. Methods for discovery and characterization of cell subsets in high dimensional mass cytometry data. Diggins KE, Ferrell PB, Irish JM (2015) Methods : 55-63
    › Primary publication · 25979346 (PubMed) · PMC4468028 (PubMed Central)
  3. In Vivo Autofluorescence Imaging of Tumor Heterogeneity in Response to Treatment. Shah AT, Diggins KE, Walsh AJ, Irish JM, Skala MC (2015) Neoplasia 17(12): 862-870
    › Primary publication · 26696368 (PubMed) · PMC4688562 (PubMed Central)
  4. Cytometry-based single-cell analysis of intact epithelial signaling reveals MAPK activation divergent from TNF-α-induced apoptosis in vivo. Simmons AJ, Banerjee A, McKinley ET, Scurrah CR, Herring CA, Gewin LS, Masuzaki R, Karp SJ, Franklin JL, Gerdes MJ, Irish JM, Coffey RJ, Lau KS (2015) Mol Syst Biol 11(10): 835
    › Primary publication · 26519361 (PubMed) · PMC4631206 (PubMed Central)
  5. Cutting Edge: Redox Signaling Hypersensitivity Distinguishes Human Germinal Center B Cells. Polikowsky HG, Wogsland CE, Diggins KE, Huse K, Irish JM (2015) J Immunol 195(4): 1364-1367
    › Primary publication · 26157177 (PubMed) · PMC4530023 (PubMed Central)
  6. Characterizing Phenotypes and Signaling Networks of Single Human Cells by Mass Cytometry. Leelatian N, Diggins KE, Irish JM (2015) Methods Mol Biol : 99-113
    › Primary publication · 26542718 (PubMed) · PMC4656023 (PubMed Central)
  7. Joint modeling and registration of cell populations in cohorts of high-dimensional flow cytometric data. Pyne S, Lee SX, Wang K, Irish J, Tamayo P, Nazaire MD, Duong T, Ng SK, Hafler D, Levy R, Nolan GP, Mesirov J, McLachlan GJ (2014) PLoS One 9(7): e100334
    › Primary publication · 24983991 (PubMed) · PMC4077578 (PubMed Central)
  8. High-dimensional single-cell cancer biology. Irish JM, Doxie DB (2014) Curr Top Microbiol Immunol : 1-21
    › Primary publication · 24671264 (PubMed) · PMC4216808 (PubMed Central)
  9. Beyond the age of cellular discovery. Irish JM (2014) Nat Immunol 15(12): 1095-7
    › Primary publication · 25396342 (PubMed)
  10. High PD-1 expression and suppressed cytokine signaling distinguish T cells infiltrating follicular lymphoma tumors from peripheral T cells. Myklebust JH, Irish JM, Brody J, Czerwinski DK, Houot R, Kohrt HE, Timmerman J, Said J, Green MR, Delabie J, Kolstad A, Alizadeh AA, Levy R (2013) Blood 121(8): 1367-76
    › Primary publication · 23297127 (PubMed) · PMC3578953 (PubMed Central)