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Publications

The following timeline graph is generated from all co-authored publications.

Featured publications are shown below:

  1. A variant at 9p21.3 functionally implicates CDKN2B in paediatric B-cell precursor acute lymphoblastic leukaemia aetiology. Hungate EA, Vora SR, Gamazon ER, Moriyama T, Best T, Hulur I, Lee Y, Evans TJ, Ellinghaus E, Stanulla M, Rudant J, Orsi L, Clavel J, Milne E, Scott RJ, Pui CH, Cox NJ, Loh ML, Yang JJ, Skol AD, Onel K (2016) Nat Commun : 10635
    › Primary publication · 26868379 (PubMed) · PMC4754340 (PubMed Central)
  2. Transcriptomic variation of pharmacogenes in multiple human tissues and lymphoblastoid cell lines. Chhibber A, French CE, Yee SW, Gamazon ER, Theusch E, Qin X, Webb A, Papp AC, Wang A, Simmons CQ, Konkashbaev A, Chaudhry AS, Mitchel K, Stryke D, Ferrin TE, Weiss ST, Kroetz DL, Sadee W, Nickerson DA, Krauss RM, George AL, Schuetz EG, Medina MW, Cox NJ, Scherer SE, Giacomini KM, Brenner SE (2016) Pharmacogenomics J
    › Primary publication · 26856248 (PubMed) · PMC4980276 (PubMed Central)
  3. A gene-based association method for mapping traits using reference transcriptome data. Gamazon ER, Wheeler HE, Shah KP, Mozaffari SV, Aquino-Michaels K, Carroll RJ, Eyler AE, Denny JC, GTEx Consortium, Nicolae DL, Cox NJ, Im HK (2015) Nat Genet 47(9): 1091-8
    › Primary publication · 26258848 (PubMed) · PMC4552594 (PubMed Central)
  4. Pharmacogenomic variants have larger effect sizes than genetic variants associated with other dichotomous complex traits. Maranville JC, Cox NJ (2016) Pharmacogenomics J 16(4): 388-92
    › Primary publication · 26149738 (PubMed) · PMC4704992 (PubMed Central)
  5. Ethnic variation of TET2 SNP rs2454206 and association with clinical outcome in childhood AML: a report from the Children's Oncology Group. Kutny MA, Alonzo TA, Gamazon ER, Gerbing RB, Geraghty D, Lange B, Heerema NA, Sung L, Aplenc R, Franklin J, Raimondi SC, Hirsch BA, Konkashbaev A, Cox NJ, Onel K, Gamis AS, Meshinchi S (2015) Leukemia 29(12): 2424-6
    › Primary publication · 26126966 (PubMed) · PMC4675677 (PubMed Central)
  6. A genome-wide sib-pair scan for quantitative language traits reveals linkage to chromosomes 10 and 13. Evans PD, Mueller KL, Gamazon ER, Cox NJ, Tomblin JB (2015) Genes Brain Behav 14(5): 387-97
    › Primary publication · 25997078 (PubMed) · PMC4755290 (PubMed Central)
  7. SCAN database: facilitating integrative analyses of cytosine modification and expression QTL. Zhang W, Gamazon ER, Zhang X, Konkashbaev A, Liu C, Szilágyi KL, Dolan ME, Cox NJ (2015) Database (Oxford)
    › Primary publication · 25818895 (PubMed) · PMC4375357 (PubMed Central)
  8. Genome-wide identification of microRNA expression quantitative trait loci. Huan T, Rong J, Liu C, Zhang X, Tanriverdi K, Joehanes R, Chen BH, Murabito JM, Yao C, Courchesne P, Munson PJ, O'Donnell CJ, Cox N, Johnson AD, Larson MG, Levy D, Freedman JE (2015) Nat Commun : 6601
    › Primary publication · 25791433 (PubMed) · PMC4369777 (PubMed Central)
  9. A haplotype-based framework for group-wise transmission/disequilibrium tests for rare variant association analysis. Chen R, Wei Q, Zhan X, Zhong X, Sutcliffe JS, Cox NJ, Cook EH, Li C, Chen W, Li B (2015) Bioinformatics 31(9): 1452-9
    › Primary publication · 25568282 (PubMed) · PMC4410665 (PubMed Central)
  10. Genetic Variants Associated With Quantitative Glucose Homeostasis Traits Translate to Type 2 Diabetes in Mexican Americans: The GUARDIAN (Genetics Underlying Diabetes in Hispanics) Consortium. Palmer ND, Goodarzi MO, Langefeld CD, Wang N, Guo X, Taylor KD, Fingerlin TE, Norris JM, Buchanan TA, Xiang AH, Haritunians T, Ziegler JT, Williams AH, Stefanovski D, Cui J, Mackay AW, Henkin LF, Bergman RN, Gao X, Gauderman J, Varma R, Hanis CL, Cox NJ, Highland HM, Below JE, Williams AL, Burtt NP, Aguilar-Salinas CA, Huerta-Chagoya A, Gonzalez-Villalpando C, Orozco L, Haiman CA, Tsai MY, Johnson WC, Yao J, Rasmussen-Torvik L, Pankow J, Snively B, Jackson RD, Liu S, Nadler JL, Kandeel F, Chen YD, Bowden DW, Rich SS, Raffel LJ, Rotter JI, Watanabe RM, Wagenknecht LE (2015) Diabetes 64(5): 1853-66
    › Primary publication · 25524916 (PubMed) · PMC4407862 (PubMed Central)
  11. Loss of heterozygosity at the CYP2D6 locus in breast cancer: implications for germline pharmacogenetic studies. Goetz MP, Sun JX, Suman VJ, Silva GO, Perou CM, Nakamura Y, Cox NJ, Stephens PJ, Miller VA, Ross JS, Chen D, Safgren SL, Kuffel MJ, Ames MM, Kalari KR, Gomez HL, Gonzalez-Angulo AM, Burgues O, Brauch HB, Ingle JN, Ratain MJ, Yelensky R (2014) J Natl Cancer Inst 107(2)
    › Primary publication · 25490892 (PubMed) · PMC4565524 (PubMed Central)
  12. Cross-tissue and tissue-specific eQTLs: partitioning the heritability of a complex trait. Torres JM, Gamazon ER, Parra EJ, Below JE, Valladares-Salgado A, Wacher N, Cruz M, Hanis CL, Cox NJ (2014) Am J Hum Genet 95(5): 521-34
    › Primary publication · 25439722 (PubMed) · PMC4225593 (PubMed Central)
  13. Identification of a variant in KDR associated with serum VEGFR2 and pharmacodynamics of Pazopanib. Maitland ML, Xu CF, Cheng YC, Kistner-Griffin E, Ryan KA, Karrison TG, Das S, Torgerson D, Gamazon ER, Thomeas V, Levine MR, Wilson PA, Bing N, Liu Y, Cardon LR, Pandite LN, O'Connell JR, Cox NJ, Mitchell BD, Ratain MJ, Shuldiner AR (2015) Clin Cancer Res 21(2): 365-72
    › Primary publication · 25411163 (PubMed) · PMC4323272 (PubMed Central)
  14. Structural architecture of SNP effects on complex traits. Gamazon ER, Cox NJ, Davis LK (2014) Am J Hum Genet 95(5): 477-89
    › Primary publication · 25307299 (PubMed) · PMC4225594 (PubMed Central)
  15. Consensus Genotyper for Exome Sequencing (CGES): improving the quality of exome variant genotypes. Trubetskoy V, Rodriguez A, Dave U, Campbell N, Crawford EL, Cook EH, Sutcliffe JS, Foster I, Madduri R, Cox NJ, Davis LK (2015) Bioinformatics 31(2): 187-93
    › Primary publication · 25270638 (PubMed) · PMC4287941 (PubMed Central)
  16. pRRophetic: an R package for prediction of clinical chemotherapeutic response from tumor gene expression levels. Geeleher P, Cox N, Huang RS (2014) PLoS One 9(9): e107468
    › Primary publication · 25229481 (PubMed) · PMC4167990 (PubMed Central)
  17. Cross-disorder genome-wide analyses suggest a complex genetic relationship between Tourette's syndrome and OCD. Yu D, Mathews CA, Scharf JM, Neale BM, Davis LK, Gamazon ER, Derks EM, Evans P, Edlund CK, Crane J, Fagerness JA, Osiecki L, Gallagher P, Gerber G, Haddad S, Illmann C, McGrath LM, Mayerfeld C, Arepalli S, Barlassina C, Barr CL, Bellodi L, Benarroch F, Berrió GB, Bienvenu OJ, Black DW, Bloch MH, Brentani H, Bruun RD, Budman CL, Camarena B, Campbell DD, Cappi C, Silgado JC, Cavallini MC, Chavira DA, Chouinard S, Cook EH, Cookson MR, Coric V, Cullen B, Cusi D, Delorme R, Denys D, Dion Y, Eapen V, Egberts K, Falkai P, Fernandez T, Fournier E, Garrido H, Geller D, Gilbert DL, Girard SL, Grabe HJ, Grados MA, Greenberg BD, Gross-Tsur V, Grünblatt E, Hardy J, Heiman GA, Hemmings SM, Herrera LD, Hezel DM, Hoekstra PJ, Jankovic J, Kennedy JL, King RA, Konkashbaev AI, Kremeyer B, Kurlan R, Lanzagorta N, Leboyer M, Leckman JF, Lennertz L, Liu C, Lochner C, Lowe TL, Lupoli S, Macciardi F, Maier W, Manunta P, Marconi M, McCracken JT, Mesa Restrepo SC, Moessner R, Moorjani P, Morgan J, Muller H, Murphy DL, Naarden AL, Nurmi E, Ochoa WC, Ophoff RA, Pakstis AJ, Pato MT, Pato CN, Piacentini J, Pittenger C, Pollak Y, Rauch SL, Renner T, Reus VI, Richter MA, Riddle MA, Robertson MM, Romero R, Rosário MC, Rosenberg D, Ruhrmann S, Sabatti C, Salvi E, Sampaio AS, Samuels J, Sandor P, Service SK, Sheppard B, Singer HS, Smit JH, Stein DJ, Strengman E, Tischfield JA, Turiel M, Valencia Duarte AV, Vallada H, Veenstra-VanderWeele J, Walitza S, Wang Y, Weale M, Weiss R, Wendland JR, Westenberg HG, Shugart YY, Hounie AG, Miguel EC, Nicolini H, Wagner M, Ruiz-Linares A, Cath DC, McMahon W, Posthuma D, Oostra BA, Nestadt G, Rouleau GA, Purcell S, Jenike MA, Heutink P, Hanna GL, Conti DV, Arnold PD, Freimer NB, Stewart SE, Knowles JA, Cox NJ, Pauls DL (2015) Am J Psychiatry 172(1): 82-93
    › Primary publication · 25158072 (PubMed) · PMC4282594 (PubMed Central)
  18. Copy number variation in obsessive-compulsive disorder and tourette syndrome: a cross-disorder study. McGrath LM, Yu D, Marshall C, Davis LK, Thiruvahindrapuram B, Li B, Cappi C, Gerber G, Wolf A, Schroeder FA, Osiecki L, O'Dushlaine C, Kirby A, Illmann C, Haddad S, Gallagher P, Fagerness JA, Barr CL, Bellodi L, Benarroch F, Bienvenu OJ, Black DW, Bloch MH, Bruun RD, Budman CL, Camarena B, Cath DC, Cavallini MC, Chouinard S, Coric V, Cullen B, Delorme R, Denys D, Derks EM, Dion Y, Rosário MC, Eapen V, Evans P, Falkai P, Fernandez TV, Garrido H, Geller D, Grabe HJ, Grados MA, Greenberg BD, Gross-Tsur V, Grünblatt E, Heiman GA, Hemmings SM, Herrera LD, Hounie AG, Jankovic J, Kennedy JL, King RA, Kurlan R, Lanzagorta N, Leboyer M, Leckman JF, Lennertz L, Lochner C, Lowe TL, Lyon GJ, Macciardi F, Maier W, McCracken JT, McMahon W, Murphy DL, Naarden AL, Neale BM, Nurmi E, Pakstis AJ, Pato MT, Pato CN, Piacentini J, Pittenger C, Pollak Y, Reus VI, Richter MA, Riddle M, Robertson MM, Rosenberg D, Rouleau GA, Ruhrmann S, Sampaio AS, Samuels J, Sandor P, Sheppard B, Singer HS, Smit JH, Stein DJ, Tischfield JA, Vallada H, Veenstra-VanderWeele J, Walitza S, Wang Y, Wendland JR, Shugart YY, Miguel EC, Nicolini H, Oostra BA, Moessner R, Wagner M, Ruiz-Linares A, Heutink P, Nestadt G, Freimer N, Petryshen T, Posthuma D, Jenike MA, Cox NJ, Hanna GL, Brentani H, Scherer SW, Arnold PD, Stewart SE, Mathews CA, Knowles JA, Cook EH, Pauls DL, Wang K, Scharf JM (2014) J Am Acad Child Adolesc Psychiatry 53(8): 910-9
    › Primary publication · 25062598 (PubMed) · PMC4218748 (PubMed Central)
  19. Genetic association signal near NTN4 in Tourette syndrome. Paschou P, Yu D, Gerber G, Evans P, Tsetsos F, Davis LK, Karagiannidis I, Chaponis J, Gamazon E, Mueller-Vahl K, Stuhrmann M, Schloegelhofer M, Stamenkovic M, Hebebrand J, Noethen M, Nagy P, Barta C, Tarnok Z, Rizzo R, Depienne C, Worbe Y, Hartmann A, Cath DC, Budman CL, Sandor P, Barr C, Wolanczyk T, Singer H, Chou IC, Grados M, Posthuma D, Rouleau GA, Aschauer H, Freimer NB, Pauls DL, Cox NJ, Mathews CA, Scharf JM (2014) Ann Neurol 76(2): 310-5
    › Primary publication · 25042818 (PubMed) · PMC4140987 (PubMed Central)
  20. Establishment of CYP2D6 reference samples by multiple validated genotyping platforms. Fang H, Liu X, Ramírez J, Choudhury N, Kubo M, Im HK, Konkashbaev A, Cox NJ, Ratain MJ, Nakamura Y, O'Donnell PH (2014) Pharmacogenomics J 14(6): 564-72
    › Primary publication · 24980783 (PubMed) · PMC4237721 (PubMed Central)
  21. Genetic factors affecting gene transcription and catalytic activity of UDP-glucuronosyltransferases in human liver. Liu W, Ramírez J, Gamazon ER, Mirkov S, Chen P, Wu K, Sun C, Cox NJ, Cook E, Das S, Ratain MJ (2014) Hum Mol Genet 23(20): 5558-69
    › Primary publication · 24879639 (PubMed) · PMC4168829 (PubMed Central)
  22. Poly-omic prediction of complex traits: OmicKriging. Wheeler HE, Aquino-Michaels K, Gamazon ER, Trubetskoy VV, Dolan ME, Huang RS, Cox NJ, Im HK (2014) Genet Epidemiol 38(5): 402-15
    › Primary publication · 24799323 (PubMed) · PMC4072756 (PubMed Central)
  23. Guidelines for investigating causality of sequence variants in human disease. MacArthur DG, Manolio TA, Dimmock DP, Rehm HL, Shendure J, Abecasis GR, Adams DR, Altman RB, Antonarakis SE, Ashley EA, Barrett JC, Biesecker LG, Conrad DF, Cooper GM, Cox NJ, Daly MJ, Gerstein MB, Goldstein DB, Hirschhorn JN, Leal SM, Pennacchio LA, Stamatoyannopoulos JA, Sunyaev SR, Valle D, Voight BF, Winckler W, Gunter C (2014) Nature 508(7497): 469-76
    › Primary publication · 24759409 (PubMed) · PMC4180223 (PubMed Central)
  24. Integrative analyses of genetic variation, epigenetic regulation, and the transcriptome to elucidate the biology of platinum sensitivity. LaCroix B, Gamazon ER, Lenkala D, Im HK, Geeleher P, Ziliak D, Cox NJ, Huang RS (2014) BMC Genomics : 292
    › Primary publication · 24739237 (PubMed) · PMC3996490 (PubMed Central)
  25. Genetic variation associated with euphorigenic effects of d-amphetamine is associated with diminished risk for schizophrenia and attention deficit hyperactivity disorder. Hart AB, Gamazon ER, Engelhardt BE, Sklar P, Kähler AK, Hultman CM, Sullivan PF, Neale BM, Faraone SV, Psychiatric Genomics Consortium: ADHD Subgroup, de Wit H, Cox NJ, Palmer AA (2014) Proc Natl Acad Sci U S A 111(16): 5968-73
    › Primary publication · 24711425 (PubMed) · PMC4000861 (PubMed Central)
  26. Re: Concordance between CYP2D6 genotypes obtained from tumor-derived and germline DNA. Goetz MP, Brauch H, Ratain MJ, Cox NJ, Nakamura Y, Weinshilboum R, Ingle JN (2014) J Natl Cancer Inst 106(5)
    › Primary publication · 24700804 (PubMed) · PMC4580553 (PubMed Central)
  27. Obesity-associated variants within FTO form long-range functional connections with IRX3. Smemo S, Tena JJ, Kim KH, Gamazon ER, Sakabe NJ, Gómez-Marín C, Aneas I, Credidio FL, Sobreira DR, Wasserman NF, Lee JH, Puviindran V, Tam D, Shen M, Son JE, Vakili NA, Sung HK, Naranjo S, Acemel RD, Manzanares M, Nagy A, Cox NJ, Hui CC, Gomez-Skarmeta JL, Nóbrega MA (2014) Nature 507(7492): 371-5
    › Primary publication · 24646999 (PubMed) · PMC4113484 (PubMed Central)
  28. Chemotherapy-induced peripheral neurotoxicity and ototoxicity: new paradigms for translational genomics. Travis LB, Fossa SD, Sesso HD, Frisina RD, Herrmann DN, Beard CJ, Feldman DR, Pagliaro LC, Miller RC, Vaughn DJ, Einhorn LH, Cox NJ, Dolan ME, Platinum Study Group (2014) J Natl Cancer Inst 106(5)
    › Primary publication · 24623533 (PubMed) · PMC4568989 (PubMed Central)
  29. Clinical drug response can be predicted using baseline gene expression levels and in vitro drug sensitivity in cell lines. Geeleher P, Cox NJ, Huang RS (2014) Genome Biol 15(3): R47
    › Primary publication · 24580837 (PubMed) · PMC4054092 (PubMed Central)
  30. Integrating cell-based and clinical genome-wide studies to identify genetic variants contributing to treatment failure in neuroblastoma patients. Pinto N, Gamazon ER, Antao N, Myers J, Stark AL, Konkashbaev A, Im HK, Diskin SJ, London WB, Ludeman SM, Maris JM, Cox NJ, Cohn SL, Dolan ME (2014) Clin Pharmacol Ther 95(6): 644-52
    › Primary publication · 24549002 (PubMed) · PMC4029857 (PubMed Central)
  31. Genetic variation is the major determinant of individual differences in leukocyte endothelial adhesion. Grassi MA, Rao V, Winkler KP, Zhang W, Bogaard JD, Chen S, LaCroix B, Lenkala D, Rehman J, Malik AB, Cox NJ, Huang RS (2014) PLoS One 9(2): e87883
    › Primary publication · 24520339 (PubMed) · PMC3919726 (PubMed Central)
  32. Genome-wide trans-ancestry meta-analysis provides insight into the genetic architecture of type 2 diabetes susceptibility. DIAbetes Genetics Replication And Meta-analysis (DIAGRAM) Consortium, Asian Genetic Epidemiology Network Type 2 Diabetes (AGEN-T2D) Consortium, South Asian Type 2 Diabetes (SAT2D) Consortium, Mexican American Type 2 Diabetes (MAT2D) Consortium, Type 2 Diabetes Genetic Exploration by Nex-generation sequencing in muylti-Ethnic Samples (T2D-GENES) Consortium, Mahajan A, Go MJ, Zhang W, Below JE, Gaulton KJ, Ferreira T, Horikoshi M, Johnson AD, Ng MC, Prokopenko I, Saleheen D, Wang X, Zeggini E, Abecasis GR, Adair LS, Almgren P, Atalay M, Aung T, Baldassarre D, Balkau B, Bao Y, Barnett AH, Barroso I, Basit A, Been LF, Beilby J, Bell GI, Benediktsson R, Bergman RN, Boehm BO, Boerwinkle E, Bonnycastle LL, Burtt N, Cai Q, Campbell H, Carey J, Cauchi S, Caulfield M, Chan JC, Chang LC, Chang TJ, Chang YC, Charpentier G, Chen CH, Chen H, Chen YT, Chia KS, Chidambaram M, Chines PS, Cho NH, Cho YM, Chuang LM, Collins FS, Cornelis MC, Couper DJ, Crenshaw AT, van Dam RM, Danesh J, Das D, de Faire U, Dedoussis G, Deloukas P, Dimas AS, Dina C, Doney AS, Donnelly PJ, Dorkhan M, van Duijn C, Dupuis J, Edkins S, Elliott P, Emilsson V, Erbel R, Eriksson JG, Escobedo J, Esko T, Eury E, Florez JC, Fontanillas P, Forouhi NG, Forsen T, Fox C, Fraser RM, Frayling TM, Froguel P, Frossard P, Gao Y, Gertow K, Gieger C, Gigante B, Grallert H, Grant GB, Grrop LC, Groves CJ, Grundberg E, Guiducci C, Hamsten A, Han BG, Hara K, Hassanali N, Hattersley AT, Hayward C, Hedman AK, Herder C, Hofman A, Holmen OL, Hovingh K, Hreidarsson AB, Hu C, Hu FB, Hui J, Humphries SE, Hunt SE, Hunter DJ, Hveem K, Hydrie ZI, Ikegami H, Illig T, Ingelsson E, Islam M, Isomaa B, Jackson AU, Jafar T, James A, Jia W, Jöckel KH, Jonsson A, Jowett JB, Kadowaki T, Kang HM, Kanoni S, Kao WH, Kathiresan S, Kato N, Katulanda P, Keinanen-Kiukaanniemi KM, Kelly AM, Khan H, Khaw KT, Khor CC, Kim HL, Kim S, Kim YJ, Kinnunen L, Klopp N, Kong A, Korpi-Hyövälti E, Kowlessur S, Kraft P, Kravic J, Kristensen MM, Krithika S, Kumar A, Kumate J, Kuusisto J, Kwak SH, Laakso M, Lagou V, Lakka TA, Langenberg C, Langford C, Lawrence R, Leander K, Lee JM, Lee NR, Li M, Li X, Li Y, Liang J, Liju S, Lim WY, Lind L, Lindgren CM, Lindholm E, Liu CT, Liu JJ, Lobbens S, Long J, Loos RJ, Lu W, Luan J, Lyssenko V, Ma RC, Maeda S, Mägi R, Männisto S, Matthews DR, Meigs JB, Melander O, Metspalu A, Meyer J, Mirza G, Mihailov E, Moebus S, Mohan V, Mohlke KL, Morris AD, Mühleisen TW, Müller-Nurasyid M, Musk B, Nakamura J, Nakashima E, Navarro P, Ng PK, Nica AC, Nilsson PM, Njølstad I, Nöthen MM, Ohnaka K, Ong TH, Owen KR, Palmer CN, Pankow JS, Park KS, Parkin M, Pechlivanis S, Pedersen NL, Peltonen L, Perry JR, Peters A, Pinidiyapathirage JM, Platou CG, Potter S, Price JF, Qi L, Radha V, Rallidis L, Rasheed A, Rathman W, Rauramaa R, Raychaudhuri S, Rayner NW, Rees SD, Rehnberg E, Ripatti S, Robertson N, Roden M, Rossin EJ, Rudan I, Rybin D, Saaristo TE, Salomaa V, Saltevo J, Samuel M, Sanghera DK, Saramies J, Scott J, Scott LJ, Scott RA, Segrè AV, Sehmi J, Sennblad B, Shah N, Shah S, Shera AS, Shu XO, Shuldiner AR, Sigurđsson G, Sijbrands E, Silveira A, Sim X, Sivapalaratnam S, Small KS, So WY, Stančáková A, Stefansson K, Steinbach G, Steinthorsdottir V, Stirrups K, Strawbridge RJ, Stringham HM, Sun Q, Suo C, Syvänen AC, Takayanagi R, Takeuchi F, Tay WT, Teslovich TM, Thorand B, Thorleifsson G, Thorsteinsdottir U, Tikkanen E, Trakalo J, Tremoli E, Trip MD, Tsai FJ, Tuomi T, Tuomilehto J, Uitterlinden AG, Valladares-Salgado A, Vedantam S, Veglia F, Voight BF, Wang C, Wareham NJ, Wennauer R, Wickremasinghe AR, Wilsgaard T, Wilson JF, Wiltshire S, Winckler W, Wong TY, Wood AR, Wu JY, Wu Y, Yamamoto K, Yamauchi T, Yang M, Yengo L, Yokota M, Young R, Zabaneh D, Zhang F, Zhang R, Zheng W, Zimmet PZ, Altshuler D, Bowden DW, Cho YS, Cox NJ, Cruz M, Hanis CL, Kooner J, Lee JY, Seielstad M, Teo YY, Boehnke M, Parra EJ, Chambers JC, Tai ES, McCarthy MI, Morris AP (2014) Nat Genet 46(3): 234-44
    › Primary publication · 24509480 (PubMed) · PMC3969612 (PubMed Central)
  33. A genome-wide association study of early-onset breast cancer identifies PFKM as a novel breast cancer gene and supports a common genetic spectrum for breast cancer at any age. Ahsan H, Halpern J, Kibriya MG, Pierce BL, Tong L, Gamazon E, McGuire V, Felberg A, Shi J, Jasmine F, Roy S, Brutus R, Argos M, Melkonian S, Chang-Claude J, Andrulis I, Hopper JL, John EM, Malone K, Ursin G, Gammon MD, Thomas DC, Seminara D, Casey G, Knight JA, Southey MC, Giles GG, Santella RM, Lee E, Conti D, Duggan D, Gallinger S, Haile R, Jenkins M, Lindor NM, Newcomb P, Michailidou K, Apicella C, Park DJ, Peto J, Fletcher O, dos Santos Silva I, Lathrop M, Hunter DJ, Chanock SJ, Meindl A, Schmutzler RK, Müller-Myhsok B, Lochmann M, Beckmann L, Hein R, Makalic E, Schmidt DF, Bui QM, Stone J, Flesch-Janys D, Dahmen N, Nevanlinna H, Aittomäki K, Blomqvist C, Hall P, Czene K, Irwanto A, Liu J, Rahman N, Turnbull C, Familial Breast Cancer Study, Dunning AM, Pharoah P, Waisfisz Q, Meijers-Heijboer H, Uitterlinden AG, Rivadeneira F, Nicolae D, Easton DF, Cox NJ, Whittemore AS (2014) Cancer Epidemiol Biomarkers Prev 23(4): 658-69
    › Primary publication · 24493630 (PubMed) · PMC3990360 (PubMed Central)
  34. Challenges in interpreting the evidence for genetic predictors of ototoxicity. Ratain MJ, Cox NJ, Henderson TO (2013) Clin Pharmacol Ther 94(6): 631-5
    › Primary publication · 24241639 (PubMed)
  35. Partitioning the heritability of Tourette syndrome and obsessive compulsive disorder reveals differences in genetic architecture. Davis LK, Yu D, Keenan CL, Gamazon ER, Konkashbaev AI, Derks EM, Neale BM, Yang J, Lee SH, Evans P, Barr CL, Bellodi L, Benarroch F, Berrio GB, Bienvenu OJ, Bloch MH, Blom RM, Bruun RD, Budman CL, Camarena B, Campbell D, Cappi C, Cardona Silgado JC, Cath DC, Cavallini MC, Chavira DA, Chouinard S, Conti DV, Cook EH, Coric V, Cullen BA, Deforce D, Delorme R, Dion Y, Edlund CK, Egberts K, Falkai P, Fernandez TV, Gallagher PJ, Garrido H, Geller D, Girard SL, Grabe HJ, Grados MA, Greenberg BD, Gross-Tsur V, Haddad S, Heiman GA, Hemmings SM, Hounie AG, Illmann C, Jankovic J, Jenike MA, Kennedy JL, King RA, Kremeyer B, Kurlan R, Lanzagorta N, Leboyer M, Leckman JF, Lennertz L, Liu C, Lochner C, Lowe TL, Macciardi F, McCracken JT, McGrath LM, Mesa Restrepo SC, Moessner R, Morgan J, Muller H, Murphy DL, Naarden AL, Ochoa WC, Ophoff RA, Osiecki L, Pakstis AJ, Pato MT, Pato CN, Piacentini J, Pittenger C, Pollak Y, Rauch SL, Renner TJ, Reus VI, Richter MA, Riddle MA, Robertson MM, Romero R, Rosàrio MC, Rosenberg D, Rouleau GA, Ruhrmann S, Ruiz-Linares A, Sampaio AS, Samuels J, Sandor P, Sheppard B, Singer HS, Smit JH, Stein DJ, Strengman E, Tischfield JA, Valencia Duarte AV, Vallada H, Van Nieuwerburgh F, Veenstra-Vanderweele J, Walitza S, Wang Y, Wendland JR, Westenberg HG, Shugart YY, Miguel EC, McMahon W, Wagner M, Nicolini H, Posthuma D, Hanna GL, Heutink P, Denys D, Arnold PD, Oostra BA, Nestadt G, Freimer NB, Pauls DL, Wray NR, Stewart SE, Mathews CA, Knowles JA, Cox NJ, Scharf JM (2013) PLoS Genet 9(10): e1003864
    › Primary publication · 24204291 (PubMed) · PMC3812053 (PubMed Central)
  36. Quantitative allelic test--a fast test for very large association studies. Lee SM, Karrison TG, Cox NJ, Im HK (2013) Genet Epidemiol 37(8): 831-9
    › Primary publication · 24185610 (PubMed) · PMC4054703 (PubMed Central)
  37. A nondegenerate code of deleterious variants in Mendelian loci contributes to complex disease risk. Blair DR, Lyttle CS, Mortensen JM, Bearden CF, Jensen AB, Khiabanian H, Melamed R, Rabadan R, Bernstam EV, Brunak S, Jensen LJ, Nicolae D, Shah NH, Grossman RL, Cox NJ, White KP, Rzhetsky A (2013) Cell 155(1): 70-80
    › Primary publication · 24074861 (PubMed) · PMC3844554 (PubMed Central)
  38. Institutional Profile: University of Chicago Center for Personalized Therapeutics: research, education and implementation science. Dolan ME, Maitland ML, O'Donnell PH, Nakamura Y, Cox NJ, Ratain MJ (2013) Pharmacogenomics 14(12): 1383-7
    › Primary publication · 24024891 (PubMed) · PMC4022693 (PubMed Central)
  39. Identification of HKDC1 and BACE2 as genes influencing glycemic traits during pregnancy through genome-wide association studies. Hayes MG, Urbanek M, Hivert MF, Armstrong LL, Morrison J, Guo C, Lowe LP, Scheftner DA, Pluzhnikov A, Levine DM, McHugh CP, Ackerman CM, Bouchard L, Brisson D, Layden BT, Mirel D, Doheny KF, Leya MV, Lown-Hecht RN, Dyer AR, Metzger BE, Reddy TE, Cox NJ, Lowe WL, HAPO Study Cooperative Research Group (2013) Diabetes 62(9): 3282-91
    › Primary publication · 23903356 (PubMed) · PMC3749326 (PubMed Central)
  40. CYP2D6 genotype and tamoxifen activity: understanding interstudy variability in methodological quality. Ratain MJ, Nakamura Y, Cox NJ (2013) Clin Pharmacol Ther 94(2): 185-7
    › Primary publication · 23872831 (PubMed) · PMC3782290 (PubMed Central)
  41. SCAN: a systems biology approach to pharmacogenomic discovery. Gamazon ER, Huang RS, Cox NJ (2013) Methods Mol Biol : 213-24
    › Primary publication · 23824859 (PubMed) · PMC4032625 (PubMed Central)
  42. A genome-wide integrative study of microRNAs in human liver. Gamazon ER, Innocenti F, Wei R, Wang L, Zhang M, Mirkov S, Ramírez J, Huang RS, Cox NJ, Ratain MJ, Liu W (2013) BMC Genomics : 395
    › Primary publication · 23758991 (PubMed) · PMC3710218 (PubMed Central)
  43. Genetic variants associated with warfarin dose in African-American individuals: a genome-wide association study. Perera MA, Cavallari LH, Limdi NA, Gamazon ER, Konkashbaev A, Daneshjou R, Pluzhnikov A, Crawford DC, Wang J, Liu N, Tatonetti N, Bourgeois S, Takahashi H, Bradford Y, Burkley BM, Desnick RJ, Halperin JL, Khalifa SI, Langaee TY, Lubitz SA, Nutescu EA, Oetjens M, Shahin MH, Patel SR, Sagreiya H, Tector M, Weck KE, Rieder MJ, Scott SA, Wu AH, Burmester JK, Wadelius M, Deloukas P, Wagner MJ, Mushiroda T, Kubo M, Roden DM, Cox NJ, Altman RB, Klein TE, Nakamura Y, Johnson JA (2013) Lancet 382(9894): 790-6
    › Primary publication · 23755828 (PubMed) · PMC3759580 (PubMed Central)
  44. Integrative genomics: quantifying significance of phenotype-genotype relationships from multiple sources of high-throughput data. Gamazon ER, Huang RS, Dolan ME, Cox NJ, Im HK (2012) Front Genet : 202
    › Primary publication · 23755062 (PubMed) · PMC3668276 (PubMed Central)
  45. The chromosome 3q25 genomic region is associated with measures of adiposity in newborns in a multi-ethnic genome-wide association study. Urbanek M, Hayes MG, Armstrong LL, Morrison J, Lowe LP, Badon SE, Scheftner D, Pluzhnikov A, Levine D, Laurie CC, McHugh C, Ackerman CM, Mirel DB, Doheny KF, Guo C, Scholtens DM, Dyer AR, Metzger BE, Reddy TE, Cox NJ, Lowe WL, HAPO Study Cooperative Research Group (2013) Hum Mol Genet 22(17): 3583-96
    › Primary publication · 23575227 (PubMed) · PMC3736865 (PubMed Central)
  46. Comprehensive genetic analysis of cytarabine sensitivity in a cell-based model identifies polymorphisms associated with outcome in AML patients. Gamazon ER, Lamba JK, Pounds S, Stark AL, Wheeler HE, Cao X, Im HK, Mitra AK, Rubnitz JE, Ribeiro RC, Raimondi S, Campana D, Crews KR, Wong SS, Welsh M, Hulur I, Gorsic L, Hartford CM, Zhang W, Cox NJ, Dolan ME (2013) Blood 121(21): 4366-76
    › Primary publication · 23538338 (PubMed) · PMC3663430 (PubMed Central)
  47. Fine mapping of breast cancer genome-wide association studies loci in women of African ancestry identifies novel susceptibility markers. Zheng Y, Ogundiran TO, Falusi AG, Nathanson KL, John EM, Hennis AJ, Ambs S, Domchek SM, Rebbeck TR, Simon MS, Nemesure B, Wu SY, Leske MC, Odetunde A, Niu Q, Zhang J, Afolabi C, Gamazon ER, Cox NJ, Olopade CO, Olopade OI, Huo D (2013) Carcinogenesis 34(7): 1520-8
    › Primary publication · 23475944 (PubMed) · PMC3697898 (PubMed Central)
  48. Network models of genome-wide association studies uncover the topological centrality of protein interactions in complex diseases. Lee Y, Li H, Li J, Rebman E, Achour I, Regan KE, Gamazon ER, Chen JL, Yang XH, Cox NJ, Lussier YA (2013) J Am Med Inform Assoc 20(4): 619-29
    › Primary publication · 23355459 (PubMed) · PMC3721168 (PubMed Central)
  49. Genome wide association studies for diabetes: perspective on results and challenges. Torres JM, Cox NJ, Philipson LH (2013) Pediatr Diabetes 14(2): 90-6
    › Primary publication · 23350725 (PubMed)
  50. Trans-population analysis of genetic mechanisms of ethnic disparities in neuroblastoma survival. Gamazon ER, Pinto N, Konkashbaev A, Im HK, Diskin SJ, London WB, Maris JM, Dolan ME, Cox NJ, Cohn SL (2013) J Natl Cancer Inst 105(4): 302-9
    › Primary publication · 23243203 (PubMed) · PMC3691940 (PubMed Central)
  51. Integration of cell line and clinical trial genome-wide analyses supports a polygenic architecture of Paclitaxel-induced sensory peripheral neuropathy. Wheeler HE, Gamazon ER, Wing C, Njiaju UO, Njoku C, Baldwin RM, Owzar K, Jiang C, Watson D, Shterev I, Kubo M, Zembutsu H, Winer EP, Hudis CA, Shulman LN, Nakamura Y, Ratain MJ, Kroetz DL, Cancer and Leukemia Group B, Cox NJ, Dolan ME (2013) Clin Cancer Res 19(2): 491-9
    › Primary publication · 23204130 (PubMed) · PMC3549006 (PubMed Central)
  52. Cancer pharmacogenomics: strategies and challenges. Wheeler HE, Maitland ML, Dolan ME, Cox NJ, Ratain MJ (2013) Nat Rev Genet 14(1): 23-34
    › Primary publication · 23183705 (PubMed) · PMC3668552 (PubMed Central)
  53. An exponential combination procedure for set-based association tests in sequencing studies. Chen LS, Hsu L, Gamazon ER, Cox NJ, Nicolae DL (2012) Am J Hum Genet 91(6): 977-86
    › Primary publication · 23159251 (PubMed) · PMC3516612 (PubMed Central)
  54. Variants affecting exon skipping contribute to complex traits. Lee Y, Gamazon ER, Rebman E, Lee Y, Lee S, Dolan ME, Cox NJ, Lussier YA (2012) PLoS Genet 8(10): e1002998
    › Primary publication · 23133393 (PubMed) · PMC3486879 (PubMed Central)
  55. Genome-wide association study identifies germline polymorphisms associated with relapse of childhood acute lymphoblastic leukemia. Yang JJ, Cheng C, Devidas M, Cao X, Campana D, Yang W, Fan Y, Neale G, Cox N, Scheet P, Borowitz MJ, Winick NJ, Martin PL, Bowman WP, Camitta B, Reaman GH, Carroll WL, Willman CL, Hunger SP, Evans WE, Pui CH, Loh M, Relling MV (2012) Blood 120(20): 4197-204
    › Primary publication · 23007406 (PubMed) · PMC3501717 (PubMed Central)
  56. Genetic risk factors for type 2 diabetes: a trans-regulatory genetic architecture? Elbein SC, Gamazon ER, Das SK, Rasouli N, Kern PA, Cox NJ (2012) Am J Hum Genet 91(3): 466-77
    › Primary publication · 22958899 (PubMed) · PMC3512001 (PubMed Central)
  57. The 1200 patients project: creating a new medical model system for clinical implementation of pharmacogenomics. O'Donnell PH, Bush A, Spitz J, Danahey K, Saner D, Das S, Cox NJ, Ratain MJ (2012) Clin Pharmacol Ther 92(4): 446-9
    › Primary publication · 22929923 (PubMed) · PMC4482357 (PubMed Central)
  58. A genome-wide association study of breast cancer in women of African ancestry. Chen F, Chen GK, Stram DO, Millikan RC, Ambrosone CB, John EM, Bernstein L, Zheng W, Palmer JR, Hu JJ, Rebbeck TR, Ziegler RG, Nyante S, Bandera EV, Ingles SA, Press MF, Ruiz-Narvaez EA, Deming SL, Rodriguez-Gil JL, Demichele A, Chanock SJ, Blot W, Signorello L, Cai Q, Li G, Long J, Huo D, Zheng Y, Cox NJ, Olopade OI, Ogundiran TO, Adebamowo C, Nathanson KL, Domchek SM, Simon MS, Hennis A, Nemesure B, Wu SY, Leske MC, Ambs S, Hutter CM, Young A, Kooperberg C, Peters U, Rhie SK, Wan P, Sheng X, Pooler LC, Van Den Berg DJ, Le Marchand L, Kolonel LN, Henderson BE, Haiman CA (2013) Hum Genet 132(1): 39-48
    › Primary publication · 22923054 (PubMed) · PMC3749077 (PubMed Central)
  59. Clinical translation of cell-based pharmacogenomic discovery. Cox NJ, Gamazon ER, Wheeler HE, Dolan ME (2012) Clin Pharmacol Ther 92(4): 425-7
    › Primary publication · 22910437 (PubMed) · PMC3664667 (PubMed Central)
  60. Genome-wide association study of Tourette's syndrome. Scharf JM, Yu D, Mathews CA, Neale BM, Stewart SE, Fagerness JA, Evans P, Gamazon E, Edlund CK, Service SK, Tikhomirov A, Osiecki L, Illmann C, Pluzhnikov A, Konkashbaev A, Davis LK, Han B, Crane J, Moorjani P, Crenshaw AT, Parkin MA, Reus VI, Lowe TL, Rangel-Lugo M, Chouinard S, Dion Y, Girard S, Cath DC, Smit JH, King RA, Fernandez TV, Leckman JF, Kidd KK, Kidd JR, Pakstis AJ, State MW, Herrera LD, Romero R, Fournier E, Sandor P, Barr CL, Phan N, Gross-Tsur V, Benarroch F, Pollak Y, Budman CL, Bruun RD, Erenberg G, Naarden AL, Lee PC, Weiss N, Kremeyer B, Berrío GB, Campbell DD, Cardona Silgado JC, Ochoa WC, Mesa Restrepo SC, Muller H, Valencia Duarte AV, Lyon GJ, Leppert M, Morgan J, Weiss R, Grados MA, Anderson K, Davarya S, Singer H, Walkup J, Jankovic J, Tischfield JA, Heiman GA, Gilbert DL, Hoekstra PJ, Robertson MM, Kurlan R, Liu C, Gibbs JR, Singleton A, North American Brain Expression Consortium, Hardy J, UK Human Brain Expression Database, Strengman E, Ophoff RA, Wagner M, Moessner R, Mirel DB, Posthuma D, Sabatti C, Eskin E, Conti DV, Knowles JA, Ruiz-Linares A, Rouleau GA, Purcell S, Heutink P, Oostra BA, McMahon WM, Freimer NB, Cox NJ, Pauls DL (2013) Mol Psychiatry 18(6): 721-8
    › Primary publication · 22889924 (PubMed) · PMC3605224 (PubMed Central)
  61. Genome-wide association study of obsessive-compulsive disorder. Stewart SE, Yu D, Scharf JM, Neale BM, Fagerness JA, Mathews CA, Arnold PD, Evans PD, Gamazon ER, Davis LK, Osiecki L, McGrath L, Haddad S, Crane J, Hezel D, Illman C, Mayerfeld C, Konkashbaev A, Liu C, Pluzhnikov A, Tikhomirov A, Edlund CK, Rauch SL, Moessner R, Falkai P, Maier W, Ruhrmann S, Grabe HJ, Lennertz L, Wagner M, Bellodi L, Cavallini MC, Richter MA, Cook EH, Kennedy JL, Rosenberg D, Stein DJ, Hemmings SM, Lochner C, Azzam A, Chavira DA, Fournier E, Garrido H, Sheppard B, Umaña P, Murphy DL, Wendland JR, Veenstra-VanderWeele J, Denys D, Blom R, Deforce D, Van Nieuwerburgh F, Westenberg HG, Walitza S, Egberts K, Renner T, Miguel EC, Cappi C, Hounie AG, Conceição do Rosário M, Sampaio AS, Vallada H, Nicolini H, Lanzagorta N, Camarena B, Delorme R, Leboyer M, Pato CN, Pato MT, Voyiaziakis E, Heutink P, Cath DC, Posthuma D, Smit JH, Samuels J, Bienvenu OJ, Cullen B, Fyer AJ, Grados MA, Greenberg BD, McCracken JT, Riddle MA, Wang Y, Coric V, Leckman JF, Bloch M, Pittenger C, Eapen V, Black DW, Ophoff RA, Strengman E, Cusi D, Turiel M, Frau F, Macciardi F, Gibbs JR, Cookson MR, Singleton A, North American Brain Expression Consortium, Hardy J, UK Brain Expression Database, Crenshaw AT, Parkin MA, Mirel DB, Conti DV, Purcell S, Nestadt G, Hanna GL, Jenike MA, Knowles JA, Cox N, Pauls DL (2013) Mol Psychiatry 18(7): 788-98
    › Primary publication · 22889921 (PubMed) · PMC4218751 (PubMed Central)
  62. Identifying plausible genetic models based on association and linkage results: application to type 2 diabetes. Guan W, Boehnke M, Pluzhnikov A, Cox NJ, Scott LJ (2012) Genet Epidemiol 36(8): 820-8
    › Primary publication · 22865662 (PubMed) · PMC3578091 (PubMed Central)
  63. Identification of novel germline polymorphisms governing capecitabine sensitivity. O'Donnell PH, Stark AL, Gamazon ER, Wheeler HE, McIlwee BE, Gorsic L, Im HK, Huang RS, Cox NJ, Dolan ME (2012) Cancer 118(16): 4063-73
    › Primary publication · 22864933 (PubMed) · PMC3413892 (PubMed Central)
  64. Re: CYP2D6 genotype and tamoxifen response in postmenopausal women with endocrine-responsive breast cancer: the Breast International Group 1-98 trial. Nakamura Y, Ratain MJ, Cox NJ, McLeod HL, Kroetz DL, Flockhart DA (2012) J Natl Cancer Inst 104(16): 1264; author reply 1266-8
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  65. Power and sample size calculations for SNP association studies with censored time-to-event outcomes. Owzar K, Li Z, Cox N, Jung SH (2012) Genet Epidemiol 36(6): 538-48
    › Primary publication · 22685040 (PubMed) · PMC3592339 (PubMed Central)
  66. Genetic architecture of microRNA expression: implications for the transcriptome and complex traits. Gamazon ER, Ziliak D, Im HK, LaCroix B, Park DS, Cox NJ, Huang RS (2012) Am J Hum Genet 90(6): 1046-63
    › Primary publication · 22658545 (PubMed) · PMC3370272 (PubMed Central)
  67. Genome-wide ancestry association testing identifies a common European variant on 6q14.1 as a risk factor for asthma in African American subjects. Torgerson DG, Capurso D, Ampleford EJ, Li X, Moore WC, Gignoux CR, Hu D, Eng C, Mathias RA, Busse WW, Castro M, Erzurum SC, Fitzpatrick AM, Gaston B, Israel E, Jarjour NN, Teague WG, Wenzel SE, Rodríguez-Santana JR, Rodríguez-Cintrón W, Avila PC, Ford JG, Barnes KC, Burchard EG, Howard TD, Bleecker ER, Meyers DA, Cox NJ, Ober C, Nicolae DL (2012) J Allergy Clin Immunol 130(3): 622-629.e9
    › Primary publication · 22607992 (PubMed) · PMC3503456 (PubMed Central)
  68. Loci nominally associated with autism from genome-wide analysis show enrichment of brain expression quantitative trait loci but not lymphoblastoid cell line expression quantitative trait loci. Davis LK, Gamazon ER, Kistner-Griffin E, Badner JA, Liu C, Cook EH, Sutcliffe JS, Cox NJ (2012) Mol Autism 3(1): 3
    › Primary publication · 22591576 (PubMed) · PMC3484025 (PubMed Central)
  69. The role of inflammatory pathway genetic variation on maternal metabolic phenotypes during pregnancy. Urbanek M, Hayes MG, Lee H, Freathy RM, Lowe LP, Ackerman C, Jafari N, Dyer AR, Cox NJ, Dunger DB, Hattersley AT, Metzger BE, Lowe WL (2012) PLoS One 7(3): e32958
    › Primary publication · 22479352 (PubMed) · PMC3316547 (PubMed Central)
  70. On sharing quantitative trait GWAS results in an era of multiple-omics data and the limits of genomic privacy. Im HK, Gamazon ER, Nicolae DL, Cox NJ (2012) Am J Hum Genet 90(4): 591-8
    › Primary publication · 22463877 (PubMed) · PMC3322234 (PubMed Central)
  71. Replication analysis for severe diabetic retinopathy. Grassi MA, Tikhomirov A, Ramalingam S, Lee KE, Hosseini SM, Klein BE, Klein R, Lussier YA, Cox NJ, Nicolae DL (2012) Invest Ophthalmol Vis Sci 53(4): 2377-81
    › Primary publication · 22427569 (PubMed) · PMC3777289 (PubMed Central)
  72. Evaluation of 19 susceptibility loci of breast cancer in women of African ancestry. Huo D, Zheng Y, Ogundiran TO, Adebamowo C, Nathanson KL, Domchek SM, Rebbeck TR, Simon MS, John EM, Hennis A, Nemesure B, Wu SY, Leske MC, Ambs S, Niu Q, Zhang J, Cox NJ, Olopade OI (2012) Carcinogenesis 33(4): 835-40
    › Primary publication · 22357627 (PubMed) · PMC3324445 (PubMed Central)
  73. Mixed effects modeling of proliferation rates in cell-based models: consequence for pharmacogenomics and cancer. Im HK, Gamazon ER, Stark AL, Huang RS, Cox NJ, Dolan ME (2012) PLoS Genet 8(2): e1002525
    › Primary publication · 22346769 (PubMed) · PMC3276560 (PubMed Central)
  74. Enrichment of cis-regulatory gene expression SNPs and methylation quantitative trait loci among bipolar disorder susceptibility variants. Gamazon ER, Badner JA, Cheng L, Zhang C, Zhang D, Cox NJ, Gershon ES, Kelsoe JR, Greenwood TA, Nievergelt CM, Chen C, McKinney R, Shilling PD, Schork NJ, Smith EN, Bloss CS, Nurnberger JI, Edenberg HJ, Foroud T, Koller DL, Scheftner WA, Coryell W, Rice J, Lawson WB, Nwulia EA, Hipolito M, Byerley W, McMahon FJ, Schulze TG, Berrettini WH, Potash JB, Zandi PP, Mahon PB, McInnis MG, Zöllner S, Zhang P, Craig DW, Szelinger S, Barrett TB, Liu C (2013) Mol Psychiatry 18(3): 340-6
    › Primary publication · 22212596 (PubMed) · PMC3601550 (PubMed Central)
  75. Next generation analytic tools for large scale genetic epidemiology studies of complex diseases. Mechanic LE, Chen HS, Amos CI, Chatterjee N, Cox NJ, Divi RL, Fan R, Harris EL, Jacobs K, Kraft P, Leal SM, McAllister K, Moore JH, Paltoo DN, Province MA, Ramos EM, Ritchie MD, Roeder K, Schaid DJ, Stephens M, Thomas DC, Weinberg CR, Witte JS, Zhang S, Zöllner S, Feuer EJ, Gillanders EM (2012) Genet Epidemiol 36(1): 22-35
    › Primary publication · 22147673 (PubMed) · PMC3368075 (PubMed Central)
  76. A genome-wide association study of overall survival in pancreatic cancer patients treated with gemcitabine in CALGB 80303. Innocenti F, Owzar K, Cox NL, Evans P, Kubo M, Zembutsu H, Jiang C, Hollis D, Mushiroda T, Li L, Friedman P, Wang L, Glubb D, Hurwitz H, Giacomini KM, McLeod HL, Goldberg RM, Schilsky RL, Kindler HL, Nakamura Y, Ratain MJ (2012) Clin Cancer Res 18(2): 577-84
    › Primary publication · 22142827 (PubMed) · PMC3412624 (PubMed Central)
  77. Germline BAP1 mutations predispose to malignant mesothelioma. Testa JR, Cheung M, Pei J, Below JE, Tan Y, Sementino E, Cox NJ, Dogan AU, Pass HI, Trusa S, Hesdorffer M, Nasu M, Powers A, Rivera Z, Comertpay S, Tanji M, Gaudino G, Yang H, Carbone M (2011) Nat Genet 43(10): 1022-5
    › Primary publication · 21874000 (PubMed) · PMC3184199 (PubMed Central)
  78. Genome-wide meta-analysis identifies variants associated with platinating agent susceptibility across populations. Wheeler HE, Gamazon ER, Stark AL, O'Donnell PH, Gorsic LK, Huang RS, Cox NJ, Dolan ME (2013) Pharmacogenomics J 13(1): 35-43
    › Primary publication · 21844884 (PubMed) · PMC3370147 (PubMed Central)
  79. Genome-wide local ancestry approach identifies genes and variants associated with chemotherapeutic susceptibility in African Americans. Wheeler HE, Gorsic LK, Welsh M, Stark AL, Gamazon ER, Cox NJ, Dolan ME (2011) PLoS One 6(7): e21920
    › Primary publication · 21755009 (PubMed) · PMC3130766 (PubMed Central)
  80. Platinum sensitivity-related germline polymorphism discovered via a cell-based approach and analysis of its association with outcome in ovarian cancer patients. Huang RS, Johnatty SE, Gamazon ER, Im HK, Ziliak D, Duan S, Zhang W, Kistner EO, Chen P, Beesley J, Mi S, O'Donnell PH, Fraiman YS, Das S, Cox NJ, Lu Y, Macgregor S, Goode EL, Vierkant RA, Fridley BL, Hogdall E, Kjaer SK, Jensen A, Moysich KB, Grasela M, Odunsi K, Brown R, Paul J, Lambrechts D, Despierre E, Vergote I, Gross J, Karlan BY, Defazio A, Chenevix-Trench G, Australian Ovarian Cancer Study Group, Dolan ME (2011) Clin Cancer Res 17(16): 5490-500
    › Primary publication · 21705454 (PubMed) · PMC3160494 (PubMed Central)
  81. Population differences in microRNA expression and biological implications. Huang RS, Gamazon ER, Ziliak D, Wen Y, Im HK, Zhang W, Wing C, Duan S, Bleibel WK, Cox NJ, Dolan ME (2011) RNA Biol 8(4): 692-701
    › Primary publication · 21691150 (PubMed) · PMC3225983 (PubMed Central)
  82. Genome-wide association and meta-analysis in populations from Starr County, Texas, and Mexico City identify type 2 diabetes susceptibility loci and enrichment for expression quantitative trait loci in top signals. Below JE, Gamazon ER, Morrison JV, Konkashbaev A, Pluzhnikov A, McKeigue PM, Parra EJ, Elbein SC, Hallman DM, Nicolae DL, Bell GI, Cruz M, Cox NJ, Hanis CL (2011) Diabetologia 54(8): 2047-55
    › Primary publication · 21647700 (PubMed) · PMC3761075 (PubMed Central)
  83. Identification, replication, and functional fine-mapping of expression quantitative trait loci in primary human liver tissue. Innocenti F, Cooper GM, Stanaway IB, Gamazon ER, Smith JD, Mirkov S, Ramirez J, Liu W, Lin YS, Moloney C, Aldred SF, Trinklein ND, Schuetz E, Nickerson DA, Thummel KE, Rieder MJ, Rettie AE, Ratain MJ, Cox NJ, Brown CD (2011) PLoS Genet 7(5): e1002078
    › Primary publication · 21637794 (PubMed) · PMC3102751 (PubMed Central)
  84. Copy number polymorphisms and anticancer pharmacogenomics. Gamazon ER, Huang RS, Dolan ME, Cox NJ (2011) Genome Biol 12(5): R46
    › Primary publication · 21609475 (PubMed) · PMC3219969 (PubMed Central)
  85. Genome-wide association study of type 2 diabetes in a sample from Mexico City and a meta-analysis of a Mexican-American sample from Starr County, Texas. Parra EJ, Below JE, Krithika S, Valladares A, Barta JL, Cox NJ, Hanis CL, Wacher N, Garcia-Mena J, Hu P, Shriver MD, Diabetes Genetics Replication and Meta-analysis (DIAGRAM) Consortium, Kumate J, McKeigue PM, Escobedo J, Cruz M (2011) Diabetologia 54(8): 2038-46
    › Primary publication · 21573907 (PubMed) · PMC3818640 (PubMed Central)
  86. Factors that impact susceptibility to fiber-induced health effects. Below JE, Cox NJ, Fukagawa NK, Hirvonen A, Testa JR (2011) J Toxicol Environ Health B Crit Rev 14(1-4): 246-66
    › Primary publication · 21534090 (PubMed) · PMC3118508 (PubMed Central)
  87. Germline polymorphisms discovered via a cell-based, genome-wide approach predict platinum response in head and neck cancers. Ziliak D, O'Donnell PH, Im HK, Gamazon ER, Chen P, Delaney S, Shukla S, Das S, Cox NJ, Vokes EE, Cohen EE, Dolan ME, Huang RS (2011) Transl Res 157(5): 265-72
    › Primary publication · 21497773 (PubMed) · PMC3079878 (PubMed Central)
  88. Genome-wide meta-analysis for severe diabetic retinopathy. Grassi MA, Tikhomirov A, Ramalingam S, Below JE, Cox NJ, Nicolae DL (2011) Hum Mol Genet 20(12): 2472-81
    › Primary publication · 21441570 (PubMed) · PMC3098732 (PubMed Central)
  89. Genetic Analysis in Translational Medicine: The 2010 GOLDEN HELIX Symposium. Patrinos GP, Innocenti F, Cox N, Fortina P (2011) Hum Mutat 32(6): 698-703
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  90. The use of genomic information to optimize cancer chemotherapy. Innocenti F, Cox NJ, Dolan ME (2011) Semin Oncol 38(2): 186-95
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  91. Biomolecular Systems of Disease Buried Across Multiple GWAS Unveiled by Information Theory and Ontology. Lee Y, Li J, Gamazon E, Chen JL, Tikhomirov A, Cox NJ, Lussier YA (2010) AMIA Jt Summits Transl Sci Proc : 31-5
    › Primary publication · 21347143 (PubMed) · PMC3041547 (PubMed Central)
  92. A study of CNVs as trait-associated polymorphisms and as expression quantitative trait loci. Gamazon ER, Nicolae DL, Cox NJ (2011) PLoS Genet 7(2): e1001292
    › Primary publication · 21304891 (PubMed) · PMC3033384 (PubMed Central)
  93. Parent-of-origin effects of the serotonin transporter gene associated with autism. Kistner-Griffin E, Brune CW, Davis LK, Sutcliffe JS, Cox NJ, Cook EH (2011) Am J Med Genet B Neuropsychiatr Genet 156(2): 139-44
    › Primary publication · 21302342 (PubMed) · PMC3438509 (PubMed Central)
  94. Ancestry and pharmacogenomics of relapse in acute lymphoblastic leukemia. Yang JJ, Cheng C, Devidas M, Cao X, Fan Y, Campana D, Yang W, Neale G, Cox NJ, Scheet P, Borowitz MJ, Winick NJ, Martin PL, Willman CL, Bowman WP, Camitta BM, Carroll A, Reaman GH, Carroll WL, Loh M, Hunger SP, Pui CH, Evans WE, Relling MV (2011) Nat Genet 43(3): 237-41
    › Primary publication · 21297632 (PubMed) · PMC3104508 (PubMed Central)
  95. The missing association: sequencing-based discovery of novel SNPs in VKORC1 and CYP2C9 that affect warfarin dose in African Americans. Perera MA, Gamazon E, Cavallari LH, Patel SR, Poindexter S, Kittles RA, Nicolae D, Cox NJ (2011) Clin Pharmacol Ther 89(3): 408-15
    › Primary publication · 21270790 (PubMed) · PMC3625373 (PubMed Central)
  96. Comprehensive evaluation of the contribution of X chromosome genes to platinum sensitivity. Gamazon ER, Im HK, O'Donnell PH, Ziliak D, Stark AL, Cox NJ, Dolan ME, Huang RS (2011) Mol Cancer Ther 10(3): 472-80
    › Primary publication · 21252287 (PubMed) · PMC3079551 (PubMed Central)
  97. Population differences in the rate of proliferation of international HapMap cell lines. Stark AL, Zhang W, Zhou T, O'Donnell PH, Beiswanger CM, Huang RS, Cox NJ, Dolan ME (2010) Am J Hum Genet 87(6): 829-33
    › Primary publication · 21109222 (PubMed) · PMC2997375 (PubMed Central)
  98. Exprtarget: an integrative approach to predicting human microRNA targets. Gamazon ER, Im HK, Duan S, Lussier YA, Cox NJ, Dolan ME, Zhang W (2010) PLoS One 5(10): e13534
    › Primary publication · 20975837 (PubMed) · PMC2958831 (PubMed Central)
  99. Identification of Diabetic Retinopathy Genes through a Genome-Wide Association Study among Mexican-Americans from Starr County, Texas. Fu YP, Hallman DM, Gonzalez VH, Klein BE, Klein R, Hayes MG, Cox NJ, Bell GI, Hanis CL (2010) J Ophthalmol
    › Primary publication · 20871662 (PubMed) · PMC2939442 (PubMed Central)
  100. Hyperglycemia and Adverse Pregnancy Outcome (HAPO) study: common genetic variants in GCK and TCF7L2 are associated with fasting and postchallenge glucose levels in pregnancy and with the new consensus definition of gestational diabetes mellitus from the International Association of Diabetes and Pregnancy Study Groups. Freathy RM, Hayes MG, Urbanek M, Lowe LP, Lee H, Ackerman C, Frayling TM, Cox NJ, Dunger DB, Dyer AR, Hattersley AT, Metzger BE, Lowe WL, HAPO Study Cooperative Research Group (2010) Diabetes 59(10): 2682-9
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  102. Obesity and hyperinsulinemia in a family with pancreatic agenesis and MODY caused by the IPF1 mutation Pro63fsX60. Fajans SS, Bell GI, Paz VP, Below JE, Cox NJ, Martin C, Thomas IH, Chen M (2010) Transl Res 156(1): 7-14
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  103. Spoiling the whole bunch: quality control aimed at preserving the integrity of high-throughput genotyping. Pluzhnikov A, Below JE, Konkashbaev A, Tikhomirov A, Kistner-Griffin E, Roe CA, Nicolae DL, Cox NJ (2010) Am J Hum Genet 87(1): 123-8
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  104. Genetic variations in GRIA1 on chromosome 5q33 related to asparaginase hypersensitivity. Chen SH, Pei D, Yang W, Cheng C, Jeha S, Cox NJ, Evans WE, Pui CH, Relling MV (2010) Clin Pharmacol Ther 88(2): 191-6
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  105. National Institutes of Health State-of-the-Science Conference statement: preventing alzheimer disease and cognitive decline. Daviglus ML, Bell CC, Berrettini W, Bowen PE, Connolly ES, Cox NJ, Dunbar-Jacob JM, Granieri EC, Hunt G, McGarry K, Patel D, Potosky AL, Sanders-Bush E, Silberberg D, Trevisan M (2010) Ann Intern Med 153(3): 176-81
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  106. Chemotherapeutic drug susceptibility associated SNPs are enriched in expression quantitative trait loci. Gamazon ER, Huang RS, Cox NJ, Dolan ME (2010) Proc Natl Acad Sci U S A 107(20): 9287-92
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  107. Trait-associated SNPs are more likely to be eQTLs: annotation to enhance discovery from GWAS. Nicolae DL, Gamazon E, Zhang W, Duan S, Dolan ME, Cox NJ (2010) PLoS Genet 6(4): e1000888
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  108. Reconstructability analysis as a tool for identifying gene-gene interactions in studies of human diseases. Shervais S, Kramer PL, Westaway SK, Cox NJ, Zwick M (2010) Stat Appl Genet Mol Biol : Article18
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  109. PACdb: a database for cell-based pharmacogenomics. Gamazon ER, Duan S, Zhang W, Huang RS, Kistner EO, Dolan ME, Cox NJ (2010) Pharmacogenet Genomics 20(4): 269-73
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  110. Comprehensive survey of SNPs in the Affymetrix exon array using the 1000 Genomes dataset. Gamazon ER, Zhang W, Dolan ME, Cox NJ (2010) PLoS One 5(2): e9366
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  111. Maternal transmission of a rare GABRB3 signal peptide variant is associated with autism. Delahanty RJ, Kang JQ, Brune CW, Kistner EO, Courchesne E, Cox NJ, Cook EH, Macdonald RL, Sutcliffe JS (2011) Mol Psychiatry 16(1): 86-96
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  112. SCAN: SNP and copy number annotation. Gamazon ER, Zhang W, Konkashbaev A, Duan S, Kistner EO, Nicolae DL, Dolan ME, Cox NJ (2010) Bioinformatics 26(2): 259-62
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  113. A genome-wide association study identifies a novel major locus for glycemic control in type 1 diabetes, as measured by both A1C and glucose. Paterson AD, Waggott D, Boright AP, Hosseini SM, Shen E, Sylvestre MP, Wong I, Bharaj B, Cleary PA, Lachin JM, MAGIC (Meta-Analyses of Glucose and Insulin-related traits Consortium), Below JE, Nicolae D, Cox NJ, Canty AJ, Sun L, Bull SB, Diabetes Control and Complications Trial/Epidemiology of Diabetes Interventions and Complications Research Group (2010) Diabetes 59(2): 539-49
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  114. Finding the missing heritability of complex diseases. Manolio TA, Collins FS, Cox NJ, Goldstein DB, Hindorff LA, Hunter DJ, McCarthy MI, Ramos EM, Cardon LR, Chakravarti A, Cho JH, Guttmacher AE, Kong A, Kruglyak L, Mardis E, Rotimi CN, Slatkin M, Valle D, Whittemore AS, Boehnke M, Clark AG, Eichler EE, Gibson G, Haines JL, Mackay TF, McCarroll SA, Visscher PM (2009) Nature 461(7265): 747-53
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  115. A pharmacogene database enhanced by the 1000 Genomes Project. Gamazon ER, Zhang W, Huang RS, Dolan ME, Cox NJ (2009) Pharmacogenet Genomics 19(10): 829-32
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  116. Expression and alternative splicing of folate pathway genes in HapMap lymphoblastoid cell lines. Duan S, Huang RS, Zhang W, Mi S, Bleibel WK, Kistner EO, Cox NJ, Dolan ME (2009) Pharmacogenomics 10(4): 549-63
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  117. Genome-wide association study to identify novel loci associated with therapy-related myeloid leukemia susceptibility. Knight JA, Skol AD, Shinde A, Hastings D, Walgren RA, Shao J, Tennant TR, Banerjee M, Allan JM, Le Beau MM, Larson RA, Graubert TA, Cox NJ, Onel K (2009) Blood 113(22): 5575-82
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  118. Interaction of prenatal exposure to cigarettes and MAOA genotype in pathways to youth antisocial behavior. Wakschlag LS, Kistner EO, Pine DS, Biesecker G, Pickett KE, Skol AD, Dukic V, Blair RJ, Leventhal BL, Cox NJ, Burns JL, Kasza KE, Wright RJ, Cook EH (2010) Mol Psychiatry 15(9): 928-37
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  119. FstSNP-HapMap3: a database of SNPs with high population differentiation for HapMap3. Duan S, Zhang W, Cox NJ, Dolan ME (2008) Bioinformation 3(3): 139-41
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  120. Identification of common genetic variants that account for transcript isoform variation between human populations. Zhang W, Duan S, Bleibel WK, Wisel SA, Huang RS, Wu X, He L, Clark TA, Chen TX, Schweitzer AC, Blume JE, Dolan ME, Cox NJ (2009) Hum Genet 125(1): 81-93
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  121. Population-specific GSTM1 copy number variation. Huang RS, Chen P, Wisel S, Duan S, Zhang W, Cook EH, Das S, Cox NJ, Dolan ME (2009) Hum Mol Genet 18(2): 366-72
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  122. SNPinProbe_1.0: a database for filtering out probes in the Affymetrix GeneChip human exon 1.0 ST array potentially affected by SNPs. Duan S, Zhang W, Bleibel WK, Cox NJ, Dolan ME (2008) Bioinformation 2(10): 469-70
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  123. Prediction of CYP3A4 enzyme activity using haplotype tag SNPs in African Americans. Perera MA, Thirumaran RK, Cox NJ, Hanauer S, Das S, Brimer-Cline C, Lamba V, Schuetz EG, Ratain MJ, Di Rienzo A (2009) Pharmacogenomics J 9(1): 49-60
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  124. Psychiatrists' attitudes, knowledge, and experience regarding genetics: a preliminary study. Hoop JG, Roberts LW, Hammond KA, Cox NJ (2008) Genet Med 10(6): 439-49
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  125. Identification of genetic variants and gene expression relationships associated with pharmacogenes in humans. Huang RS, Duan S, Kistner EO, Zhang W, Bleibel WK, Cox NJ, Dolan ME (2008) Pharmacogenet Genomics 18(6): 545-9
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  126. Concordant gene expression in leukemia cells and normal leukocytes is associated with germline cis-SNPs. French D, Yang W, Hamilton LH, Neale G, Fan Y, Downing JR, Cox NJ, Pui CH, Evans WE, Relling MV (2008) PLoS One 3(5): e2144
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  127. Psychiatrists' attitudes regarding genetic testing and patient safeguards: a preliminary study. Hoop JG, Roberts LW, Green Hammond KA, Cox NJ (2008) Genet Test 12(2): 245-52
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  128. Genetic architecture of transcript-level variation in humans. Duan S, Huang RS, Zhang W, Bleibel WK, Roe CA, Clark TA, Chen TX, Schweitzer AC, Blume JE, Cox NJ, Dolan ME (2008) Am J Hum Genet 82(5): 1101-13
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  129. SNPs meet CNVs in genome-wide association studies: HGV2007 meeting report. Estivill X, Cox NJ, Chanock SJ, Kwok PY, Scherer SW, Brookes AJ (2008) PLoS Genet 4(4): e1000068
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  130. Transmission disequilibrium testing of the chromosome 15q11-q13 region in autism. Kim SJ, Brune CW, Kistner EO, Christian SL, Courchesne EH, Cox NJ, Cook EH (2008) Am J Med Genet B Neuropsychiatr Genet 147B(7): 1116-25
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  131. Evaluation of genetic variation contributing to differences in gene expression between populations. Zhang W, Duan S, Kistner EO, Bleibel WK, Huang RS, Clark TA, Chen TX, Schweitzer AC, Blume JE, Cox NJ, Dolan ME (2008) Am J Hum Genet 82(3): 631-40
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  132. Meta-analysis of 23 type 2 diabetes linkage studies from the International Type 2 Diabetes Linkage Analysis Consortium. Guan W, Pluzhnikov A, Cox NJ, Boehnke M, International Type 2 Diabetes Linkage Analysis Consortium (2008) Hum Hered 66(1): 35-49
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  133. Relationship of EGFR mutations, expression, amplification, and polymorphisms to epidermal growth factor receptor inhibitors in the NCI60 cell lines. Liu W, Wu X, Zhang W, Montenegro RC, Fackenthal DL, Spitz JA, Huff LM, Innocenti F, Das S, Cook EH, Cox NJ, Bates SE, Ratain MJ (2007) Clin Cancer Res 13(22 Pt 1): 6788-95
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  134. Interpreting P values in pharmacogenetic studies: a call for process and perspective. Maitland ML, Ratain MJ, Cox NJ (2007) J Clin Oncol 25(29): 4513-5
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  135. Genetic polymorphisms in uridine diphospho-glucuronosyltransferase 1A1 and breast cancer risk in Africans. Huo D, Kim HJ, Adebamowo CA, Ogundiran TO, Akang EE, Campbell O, Adenipekun A, Niu Q, Sveen L, Fackenthal JD, Fackenthal DL, Das S, Cox N, Di Rienzo A, Olopade OI (2008) Breast Cancer Res Treat 110(2): 367-76
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  136. Insulin gene mutations as a cause of permanent neonatal diabetes. Støy J, Edghill EL, Flanagan SE, Ye H, Paz VP, Pluzhnikov A, Below JE, Hayes MG, Cox NJ, Lipkind GM, Lipton RB, Greeley SA, Patch AM, Ellard S, Steiner DF, Hattersley AT, Philipson LH, Bell GI, Neonatal Diabetes International Collaborative Group (2007) Proc Natl Acad Sci U S A 104(38): 15040-4
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  137. Identification of type 2 diabetes genes in Mexican Americans through genome-wide association studies. Hayes MG, Pluzhnikov A, Miyake K, Sun Y, Ng MC, Roe CA, Below JE, Nicolae RI, Konkashbaev A, Bell GI, Cox NJ, Hanis CL (2007) Diabetes 56(12): 3033-44
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  138. Gene-based SNP mapping of a psychotic bipolar affective disorder linkage region on 22q12.3: association with HMG2L1 and TOM1. Potash JB, Buervenich S, Cox NJ, Zandi PP, Akula N, Steele J, Rathe JA, Avramopoulos D, Detera-Wadleigh SD, Gershon ES, DePaulo JR, Feinberg AP, McMahon FJ, NIMH Genetics Initiative Bipolar Disorder Consortium (2008) Am J Med Genet B Neuropsychiatr Genet 147B(1): 59-67
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  139. Evidence for a susceptibility locus on chromosome 10p15 in early-onset obsessive-compulsive disorder. Hanna GL, Veenstra-Vanderweele J, Cox NJ, Van Etten M, Fischer DJ, Himle JA, Bivens NC, Wu X, Roe CA, Hennessy KA, Dickel DE, Leventhal BL, Cook EH (2007) Biol Psychiatry 62(8): 856-62
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  140. A genome-wide approach to identify genetic variants that contribute to etoposide-induced cytotoxicity. Huang RS, Duan S, Bleibel WK, Kistner EO, Zhang W, Clark TA, Chen TX, Schweitzer AC, Blume JE, Cox NJ, Dolan ME (2007) Proc Natl Acad Sci U S A 104(23): 9758-63
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  141. Gender-specific differences in expression in human lymphoblastoid cell lines. Zhang W, Bleibel WK, Roe CA, Cox NJ, Eileen Dolan M (2007) Pharmacogenet Genomics 17(6): 447-50
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  142. A German genome-wide linkage scan for type 2 diabetes supports the existence of a metabolic syndrome locus on chromosome 1p36.13 and a type 2 diabetes locus on chromosome 16p12.2. Hoffmann K, Mattheisen M, Dahm S, Nürnberg P, Roe C, Johnson J, Cox NJ, Wichmann HE, Wienker TF, Schulze J, Schwarz PE, Lindner TH (2007) Diabetologia 50(7): 1418-22
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  143. Genetic studies of stuttering in a founder population. Wittke-Thompson JK, Ambrose N, Yairi E, Roe C, Cook EH, Ober C, Cox NJ (2007) J Fluency Disord 32(1): 33-50
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  144. Combined analysis of three whole genome linkage scans for Ankylosing Spondylitis. Carter KW, Pluzhnikov A, Timms AE, Miceli-Richard C, Bourgain C, Wordsworth BP, Jean-Pierre H, Cox NJ, Palmer LJ, Breban M, Reveille JD, Brown MA (2007) Rheumatology (Oxford) 46(5): 763-71
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  145. Are genome-wide association studies all that we need to dissect the genetic component of complex human diseases? Bourgain C, Génin E, Cox N, Clerget-Darpoux F (2007) Eur J Hum Genet 15(3): 260-3
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  146. Fine mapping and positional candidate studies on chromosome 5p13 identify multiple asthma susceptibility loci. Kurz T, Hoffjan S, Hayes MG, Schneider D, Nicolae R, Heinzmann A, Jerkic SP, Parry R, Cox NJ, Deichmann KA, Ober C (2006) J Allergy Clin Immunol 118(2): 396-402
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  147. Association studies of variants in the genes involved in pancreatic beta-cell function in type 2 diabetes in Japanese subjects. Yokoi N, Kanamori M, Horikawa Y, Takeda J, Sanke T, Furuta H, Nanjo K, Mori H, Kasuga M, Hara K, Kadowaki T, Tanizawa Y, Oka Y, Iwami Y, Ohgawara H, Yamada Y, Seino Y, Yano H, Cox NJ, Seino S (2006) Diabetes 55(8): 2379-86
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  148. Association of the calpain-10 gene with type 2 diabetes in Europeans: results of pooled and meta-analyses. Tsuchiya T, Schwarz PE, Bosque-Plata LD, Geoffrey Hayes M, Dina C, Froguel P, Wayne Towers G, Fischer S, Temelkova-Kurktschiev T, Rietzsch H, Graessler J, Vcelák J, Palyzová D, Selisko T, Bendlová B, Schulze J, Julius U, Hanefeld M, Weedon MN, Evans JC, Frayling TM, Hattersley AT, Orho-Melander M, Groop L, Malecki MT, Hansen T, Pedersen O, Fingerlin TE, Boehnke M, Hanis CL, Cox NJ, Bell GI (2006) Mol Genet Metab 89(1-2): 174-84
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  149. Association testing of the positional and functional candidate gene SLC1A1/EAAC1 in early-onset obsessive-compulsive disorder. Dickel DE, Veenstra-VanderWeele J, Cox NJ, Wu X, Fischer DJ, Van Etten-Lee M, Himle JA, Leventhal BL, Cook EH, Hanna GL (2006) Arch Gen Psychiatry 63(7): 778-85
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  150. GEL: a novel genotype calling algorithm using empirical likelihood. Nicolae DL, Wu X, Miyake K, Cox NJ (2006) Bioinformatics 22(16): 1942-7
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  151. Common polymorphisms of calpain-10 are associated with abdominal obesity in subjects at high risk of type 2 diabetes. Pihlajamäki J, Salmenniemi U, Vänttinen M, Ruotsalainen E, Kuusisto J, Vauhkonen I, Kainulainen S, Ng MC, Cox NJ, Bell GI, Laakso M (2006) Diabetologia 49(7): 1560-6
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  152. Coverage and characteristics of the Affymetrix GeneChip Human Mapping 100K SNP set. Nicolae DL, Wen X, Voight BF, Cox NJ (2006) PLoS Genet 2(5): e67
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  153. New complexities in the genetics of stuttering: significant sex-specific linkage signals. Suresh R, Ambrose N, Roe C, Pluzhnikov A, Wittke-Thompson JK, Ng MC, Wu X, Cook EH, Lundstrom C, Garsten M, Ezrati R, Yairi E, Cox NJ (2006) Am J Hum Genet 78(4): 554-63
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  154. Genomewide linkage scan of 409 European-ancestry and African American families with schizophrenia: suggestive evidence of linkage at 8p23.3-p21.2 and 11p13.1-q14.1 in the combined sample. Suarez BK, Duan J, Sanders AR, Hinrichs AL, Jin CH, Hou C, Buccola NG, Hale N, Weilbaecher AN, Nertney DA, Olincy A, Green S, Schaffer AW, Smith CJ, Hannah DE, Rice JP, Cox NJ, Martinez M, Mowry BJ, Amin F, Silverman JM, Black DW, Byerley WF, Crowe RR, Freedman R, Cloninger CR, Levinson DF, Gejman PV (2006) Am J Hum Genet 78(2): 315-33
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  155. Patterns of linkage disequilibrium in the type 2 diabetes gene calpain-10. Hayes MG, del Bosque-Plata L, Tsuchiya T, Hanis CL, Bell GI, Cox NJ (2005) Diabetes 54(12): 3573-6
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  156. The linkage and association of the gene encoding upstream stimulatory factor 1 with type 2 diabetes and metabolic syndrome in the Chinese population. Ng MC, Miyake K, So WY, Poon EW, Lam VK, Li JK, Cox NJ, Bell GI, Chan JC (2005) Diabetologia 48(10): 2018-24
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  157. Genetic epidemiology of diabetes. Permutt MA, Wasson J, Cox N (2005) J Clin Invest 115(6): 1431-9
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  158. Haplotype structure and phylogenetic shadowing of a hypervariable region in the CAPN10 gene. Clark VJ, Cox NJ, Hammond M, Hanis CL, Di Rienzo A (2005) Hum Genet 117(2-3): 258-66
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  159. Rational inferences about departures from Hardy-Weinberg equilibrium. Wittke-Thompson JK, Pluzhnikov A, Cox NJ (2005) Am J Hum Genet 76(6): 967-86
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  160. Genomewide significant linkage to stuttering on chromosome 12. Riaz N, Steinberg S, Ahmad J, Pluzhnikov A, Riazuddin S, Cox NJ, Drayna D (2005) Am J Hum Genet 76(4): 647-51
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  161. Genetic variants in the calpain-10 gene and the development of type 2 diabetes in the Japanese population. Iwasaki N, Horikawa Y, Tsuchiya T, Kitamura Y, Nakamura T, Tanizawa Y, Oka Y, Hara K, Kadowaki T, Awata T, Honda M, Yamashita K, Oda N, Yu L, Yamada N, Ogata M, Kamatani N, Iwamoto Y, Del Bosque-Plata L, Hayes MG, Cox NJ, Bell GI (2005) J Hum Genet 50(2): 92-8
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  162. Fine mapping and positional candidate studies identify HLA-G as an asthma susceptibility gene on chromosome 6p21. Nicolae D, Cox NJ, Lester LA, Schneider D, Tan Z, Billstrand C, Kuldanek S, Donfack J, Kogut P, Patel NM, Goodenbour J, Howard T, Wolf R, Koppelman GH, White SR, Parry R, Postma DS, Meyers D, Bleecker ER, Hunt JS, Solway J, Ober C (2005) Am J Hum Genet 76(2): 349-57
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  163. Genome-wide scan for metabolic syndrome and related quantitative traits in Hong Kong Chinese and confirmation of a susceptibility locus on chromosome 1q21-q25. Ng MC, So WY, Lam VK, Cockram CS, Bell GI, Cox NJ, Chan JC (2004) Diabetes 53(10): 2676-83
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  164. No bias in linkage analysis. Abecasis G, Cox N, Daly MJ, Kruglyak L, Laird N, Markianos K, Patterson N (2004) Am J Hum Genet 75(4): 722-3; author reply 723-7
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  165. Human genetics: an expression of interest. Cox NJ (2004) Nature 430(7001): 733-4
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  166. Loci on chromosomes 6q and 6p interact to increase susceptibility to bipolar affective disorder in the national institute of mental health genetics initiative pedigrees. Schulze TG, Buervenich S, Badner JA, Steele CJ, Detera-Wadleigh SD, Dick D, Foroud T, Cox NJ, MacKinnon DF, Potash JB, Berrettini WH, Byerley W, Coryell W, DePaulo JR, Gershon ES, Kelsoe JR, McInnis MG, Murphy DL, Reich T, Scheftner W, Nurnberger JI, McMahon FJ (2004) Biol Psychiatry 56(1): 18-23
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  167. Genome-wide scan for type 2 diabetes loci in Hong Kong Chinese and confirmation of a susceptibility locus on chromosome 1q21-q25. Ng MC, So WY, Cox NJ, Lam VK, Cockram CS, Critchley JA, Bell GI, Chan JC (2004) Diabetes 53(6): 1609-13
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  168. Genome scan for loci linked to mite sensitivity: the Collaborative Study on the Genetics of Asthma (CSGA). Blumenthal MN, Ober C, Beaty TH, Bleecker ER, Langefeld CD, King RA, Lester L, Cox N, Barnes K, Togias A, Mathias R, Meyers DA, Oetting W, Rich SS, CSGA (2004) Genes Immun 5(3): 226-31
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  169. Genetic Analysis Workshop II: results of segregation analyses using POINTER and linkage analyses using LIPED. Cox NJ (1984) Genet Epidemiol 1(2): 167-70
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  170. Linkage of calpain 10 to type 2 diabetes: the biological rationale. Cox NJ, Hayes MG, Roe CA, Tsuchiya T, Bell GI (2004) Diabetes : S19-25
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  171. Association of the calpain-10 gene with type 2 diabetes mellitus in a Mexican population. del Bosque-Plata L, Aguilar-Salinas CA, Tusié-Luna MT, Ramírez-Jiménez S, Rodríguez-Torres M, Aurón-Gómez M, Ramírez E, Velasco-Pérez ML, Ramírez-Silva A, Gómez-Pérez F, Hanis CL, Tsuchiya T, Yoshiuchi I, Cox NJ, Bell GI (2004) Mol Genet Metab 81(2): 122-6
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  172. Findings in an independent sample support an association between bipolar affective disorder and the G72/G30 locus on chromosome 13q33. Chen YS, Akula N, Detera-Wadleigh SD, Schulze TG, Thomas J, Potash JB, DePaulo JR, McInnis MG, Cox NJ, McMahon FJ (2004) Mol Psychiatry 9(1): 87-92; image 5
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  173. Confirmed locus on chromosome 11p and candidate loci on 6q and 8p for the triglyceride and cholesterol traits of combined hyperlipidemia. Naoumova RP, Bonney SA, Eichenbaum-Voline S, Patel HN, Jones B, Jones EL, Amey J, Colilla S, Neuwirth CK, Allotey R, Seed M, Betteridge DJ, Galton DJ, Cox NJ, Bell GI, Scott J, Shoulders CC (2003) Arterioscler Thromb Vasc Biol 23(11): 2070-7
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  174. A 48-hour exposure of pancreatic islets to calpain inhibitors impairs mitochondrial fuel metabolism and the exocytosis of insulin. Zhou YP, Sreenan S, Pan CY, Currie KP, Bindokas VP, Horikawa Y, Lee JP, Ostrega D, Ahmed N, Baldwin AC, Cox NJ, Fox AP, Miller RJ, Bell GI, Polonsky KS (2003) Metabolism 52(5): 528-34
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  175. Evidence for gene-environment interactions in a linkage study of asthma and smoking exposure. Colilla S, Nicolae D, Pluzhnikov A, Blumenthal MN, Beaty TH, Bleecker ER, Lange EM, Rich SS, Meyers DA, Ober C, Cox NJ, Collaborative Study for the Genetics of Asthma (2003) J Allergy Clin Immunol 111(4): 840-6
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  176. Calpain 10 and genetics of type 2 diabetes. Cox NJ (2002) Curr Diab Rep 2(2): 186-90
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  177. Locus on chromosome 6p linked to elevated HDL cholesterol serum levels and to protection against premature atherosclerosis in a kindred with familial hypercholesterolemia. Canizales-Quinteros S, Aguilar-Salinas CA, Reyes-Rodríguez E, Riba L, Rodríguez-Torres M, Ramírez-Jiménez S, Huertas-Vázquez A, Fragoso-Ontiveros V, Zentella-Dehesa A, Ventura-Gallegos JL, Vega-Hernández G, López-Estrada A, Aurón-Gómez M, Gómez-Pérez F, Rull J, Cox NJ, Bell GI, Tusié-Luna MT (2003) Circ Res 92(5): 569-76
    › Primary publication · 12609970 (PubMed)
  178. Methods for analysis and visualization of SNP genotype data for complex diseases. Tsalenko A, Ben-Dor A, Cox N, Yakhini Z (2003) Pac Symp Biocomput : 548-61
    › Primary publication · 12603057 (PubMed)
  179. Mapping genes influencing type 2 diabetes risk and BMI in Japanese subjects. Iwasaki N, Cox NJ, Wang YQ, Schwarz PE, Bell GI, Honda M, Imura M, Ogata M, Saito M, Kamatani N, Iwamoto Y (2003) Diabetes 52(1): 209-13
    › Primary publication · 12502515 (PubMed)
  180. Variants within the calpain-10 gene on chromosome 2q37 (NIDDM1) and relationships to type 2 diabetes, insulin resistance, and impaired acute insulin secretion among Scandinavian Caucasians. Rasmussen SK, Urhammer SA, Berglund L, Jensen JN, Hansen L, Echwald SM, Borch-Johnsen K, Horikawa Y, Mashima H, Lithell H, Cox NJ, Hansen T, Bell GI, Pedersen O (2002) Diabetes 51(12): 3561-7
    › Primary publication · 12453914 (PubMed)
  181. The allelic architecture of human disease genes: common disease-common variant...or not? Pritchard JK, Cox NJ (2002) Hum Mol Genet 11(20): 2417-23
    › Primary publication · 12351577 (PubMed)
  182. Relationship of insulin receptor substrate-1 and -2 genotypes to phenotypic features of polycystic ovary syndrome. Ehrmann DA, Tang X, Yoshiuchi I, Cox NJ, Bell GI (2002) J Clin Endocrinol Metab 87(9): 4297-300
    › Primary publication · 12213887 (PubMed)
  183. Genome-wide linkage analysis of families with obsessive-compulsive disorder ascertained through pediatric probands. Hanna GL, Veenstra-VanderWeele J, Cox NJ, Boehnke M, Himle JA, Curtis GC, Leventhal BL, Cook EH (2002) Am J Med Genet 114(5): 541-52
    › Primary publication · 12116192 (PubMed)
  184. Variation within the type 2 diabetes susceptibility gene calpain-10 and polycystic ovary syndrome. Haddad L, Evans JC, Gharani N, Robertson C, Rush K, Wiltshire S, Frayling TM, Wilkin TJ, Demaine A, Millward A, Hattersley AT, Conway G, Cox NJ, Bell GI, Franks S, McCarthy MI (2002) J Clin Endocrinol Metab 87(6): 2606-10
    › Primary publication · 12050223 (PubMed)
  185. Relationship of calpain-10 genotype to phenotypic features of polycystic ovary syndrome. Ehrmann DA, Schwarz PE, Hara M, Tang X, Horikawa Y, Imperial J, Bell GI, Cox NJ (2002) J Clin Endocrinol Metab 87(4): 1669-73
    › Primary publication · 11932299 (PubMed)
  186. Transmission disequilibrium mapping at the serotonin transporter gene (SLC6A4) region in autistic disorder. Kim SJ, Cox N, Courchesne R, Lord C, Corsello C, Akshoomoff N, Guter S, Leventhal BL, Courchesne E, Cook EH (2002) Mol Psychiatry 7(3): 278-88
    › Primary publication · 11920155 (PubMed)
  187. Geographic and haplotype structure of candidate type 2 diabetes susceptibility variants at the calpain-10 locus. Fullerton SM, Bartoszewicz A, Ybazeta G, Horikawa Y, Bell GI, Kidd KK, Cox NJ, Hudson RR, Di Rienzo A (2002) Am J Hum Genet 70(5): 1096-106
    › Primary publication · 11891618 (PubMed) · PMC447588 (PubMed Central)
  188. Introduction: interactions in asthma.. Cox NJ (2001) Genet Epidemiol : S264-5
    › Primary publication · 11858133 (PubMed)
  189. Computational issues in mapping variation affecting susceptibility to complex disorders: the chicken and the egg. Cox NJ (2001) Theor Popul Biol 60(3): 221-5
    › Primary publication · 11855956 (PubMed)
  190. Insulin resistance is attenuated in women with polycystic ovary syndrome with the Pro(12)Ala polymorphism in the PPARgamma gene. Hara M, Alcoser SY, Qaadir A, Beiswenger KK, Cox NJ, Ehrmann DA (2002) J Clin Endocrinol Metab 87(2): 772-5
    › Primary publication · 11836319 (PubMed)
  191. Role of calpain-10 gene variants in familial type 2 diabetes in Caucasians. Elbein SC, Chu W, Ren Q, Hemphill C, Schay J, Cox NJ, Hanis CL, Hasstedt SJ (2002) J Clin Endocrinol Metab 87(2): 650-4
    › Primary publication · 11836299 (PubMed)
  192. Genome-wide approaches for identifying interacting susceptibility regions for asthma. Colilla S, Tsalenko A, Pluznikov A, Cox NJ (2001) Genet Epidemiol : S266-71
    › Primary publication · 11793680 (PubMed)
  193. A statistical method for identification of polymorphisms that explain a linkage result. Sun L, Cox NJ, McPeek MS (2002) Am J Hum Genet 70(2): 399-411
    › Primary publication · 11791210 (PubMed) · PMC526471 (PubMed Central)
  194. Variation in the calpain-10 gene affects blood glucose levels in the British population. Lynn S, Evans JC, White C, Frayling TM, Hattersley AT, Turnbull DM, Horikawa Y, Cox NJ, Bell GI, Walker M (2002) Diabetes 51(1): 247-50
    › Primary publication · 11756349 (PubMed)
  195. MERLIN...and the geneticist's stone? Nicolae DL, Cox NJ (2002) Nat Genet 30(1): 3-4
    › Primary publication · 11753377 (PubMed)
  196. Challenges in identifying genetic variation affecting susceptibility to type 2 diabetes: examples from studies of the calpain-10 gene. Cox NJ (2001) Hum Mol Genet 10(20): 2301-5
    › Primary publication · 11673414 (PubMed)
  197. The importance of genealogy in determining genetic associations with complex traits. Newman DL, Abney M, McPeek MS, Ober C, Cox NJ (2001) Am J Hum Genet 69(5): 1146-8
    › Primary publication · 11590549 (PubMed) · PMC1274359 (PubMed Central)
  198. Calpains play a role in insulin secretion and action. Sreenan SK, Zhou YP, Otani K, Hansen PA, Currie KP, Pan CY, Lee JP, Ostrega DM, Pugh W, Horikawa Y, Cox NJ, Hanis CL, Burant CF, Fox AP, Bell GI, Polonsky KS (2001) Diabetes 50(9): 2013-20
    › Primary publication · 11522666 (PubMed)
  199. Seven regions of the genome show evidence of linkage to type 1 diabetes in a consensus analysis of 767 multiplex families. Cox NJ, Wapelhorst B, Morrison VA, Johnson L, Pinchuk L, Spielman RS, Todd JA, Concannon P (2001) Am J Hum Genet 69(4): 820-30
    › Primary publication · 11507694 (PubMed) · PMC1226067 (PubMed Central)
  200. Studies of association between the gene for calpain-10 and type 2 diabetes mellitus in the United Kingdom. Evans JC, Frayling TM, Cassell PG, Saker PJ, Hitman GA, Walker M, Levy JC, O'Rahilly S, Rao PV, Bennett AJ, Jones EC, Menzel S, Prestwich P, Simecek N, Wishart M, Dhillon R, Fletcher C, Millward A, Demaine A, Wilkin T, Horikawa Y, Cox NJ, Bell GI, Ellard S, McCarthy MI, Hattersley AT (2001) Am J Hum Genet 69(3): 544-52
    › Primary publication · 11481585 (PubMed) · PMC1235484 (PubMed Central)
  201. Genomewide screen and identification of gene-gene interactions for asthma-susceptibility loci in three U.S. populations: collaborative study on the genetics of asthma. Xu J, Meyers DA, Ober C, Blumenthal MN, Mellen B, Barnes KC, King RA, Lester LA, Howard TD, Solway J, Langefeld CD, Beaty TH, Rich SS, Bleecker ER, Cox NJ, Collaborative Study on the Genetics of Asthma (2001) Am J Hum Genet 68(6): 1437-46
    › Primary publication · 11349227 (PubMed) · PMC1226130 (PubMed Central)
  202. Heritability of insulin secretion and insulin action in women with polycystic ovary syndrome and their first degree relatives. Colilla S, Cox NJ, Ehrmann DA (2001) J Clin Endocrinol Metab 86(5): 2027-31
    › Primary publication · 11344202 (PubMed)
  203. Genome-wide linkage analyses of total serum IgE using variance components analysis in asthmatic families. Mathias RA, Freidhoff LR, Blumenthal MN, Meyers DA, Lester L, King R, Xu JF, Solway J, Barnes KC, Pierce J, Stine OC, Togias A, Oetting W, Marshik PL, Hetmanski JB, Huang SK, Ehrlich E, Dunston GM, Malveaux F, Banks-Schlegel S, Cox NJ, Bleecker E, Ober C, Beaty TH, Rich SS, CSGA (Collaborative Study of the Genetics of Asthma) (2001) Genet Epidemiol 20(3): 340-55
    › Primary publication · 11255243 (PubMed)
  204. Mutations in the coding region of the neurogenin 3 gene (NEUROG3) are not a common cause of maturity-onset diabetes of the young in Japanese subjects. del Bosque-Plata L, Lin J, Horikawa Y, Schwarz PE, Cox NJ, Iwasaki N, Ogata M, Iwamoto Y, German MS, Bell GI (2001) Diabetes 50(3): 694-6
    › Primary publication · 11246894 (PubMed)
  205. beta-cell transcription factors and diabetes: no evidence for diabetes-associated mutations in the gene encoding the basic helix-loop-helix transcription factor neurogenic differentiation 4 (NEUROD4) in Japanese patients with MODY. Horikawa Y, Horikawa Y, Cox NJ, Iwasaki N, Ogata M, Iwamoto Y, Schwitzgebel V, German MS, Bell GI (2000) Diabetes 49(11): 1955-7
    › Primary publication · 11078465 (PubMed)
  206. A second-generation genomewide screen for asthma-susceptibility alleles in a founder population. Ober C, Tsalenko A, Parry R, Cox NJ (2000) Am J Hum Genet 67(5): 1154-62
    › Primary publication · 11022011 (PubMed) · PMC1288558 (PubMed Central)
  207. A calpain-10 gene polymorphism is associated with reduced muscle mRNA levels and insulin resistance. Baier LJ, Permana PA, Yang X, Pratley RE, Hanson RL, Shen GQ, Mott D, Knowler WC, Cox NJ, Horikawa Y, Oda N, Bell GI, Bogardus C (2000) J Clin Invest 106(7): R69-73
    › Primary publication · 11018080 (PubMed) · PMC387246 (PubMed Central)
  208. Genetic variation in the gene encoding calpain-10 is associated with type 2 diabetes mellitus. Horikawa Y, Oda N, Cox NJ, Li X, Orho-Melander M, Hara M, Hinokio Y, Lindner TH, Mashima H, Schwarz PE, del Bosque-Plata L, Horikawa Y, Oda Y, Yoshiuchi I, Colilla S, Polonsky KS, Wei S, Concannon P, Iwasaki N, Schulze J, Baier LJ, Bogardus C, Groop L, Boerwinkle E, Hanis CL, Bell GI (2000) Nat Genet 26(2): 163-75
    › Primary publication · 11017071 (PubMed)
  209. No diabetes-associated mutations in the coding region of the hepatocyte nuclear factor-4gamma gene (HNF4G) in Japanese patients with MODY. Hara M, Wang X, Paz VP, Cox NJ, Iwasaki N, Ogata M, Iwamoto Y, Bell GI (2000) Diabetologia 43(8): 1064-9
    › Primary publication · 10990086 (PubMed)
  210. Beta-cell transcription factors and diabetes: no evidence for diabetes-associated mutations in the hepatocyte nuclear factor-3beta gene (HNF3B) in Japanese patients with maturity-onset diabetes of the young. Hinokio Y, Horikawa Y, Furuta H, Cox NJ, Iwasaki N, Honda M, Ogata M, Iwamoto Y, Bell GI (2000) Diabetes 49(2): 302-5
    › Primary publication · 10868948 (PubMed)
  211. Genetic inheritance of body mass index in African-American and African families. Colilla S, Rotimi C, Cooper R, Goldberg J, Cox N (2000) Genet Epidemiol 18(4): 360-76
    › Primary publication · 10797595 (PubMed)
  212. Variation in the interleukin 4-receptor alpha gene confers susceptibility to asthma and atopy in ethnically diverse populations. Ober C, Leavitt SA, Tsalenko A, Howard TD, Hoki DM, Daniel R, Newman DL, Wu X, Parry R, Lester LA, Solway J, Blumenthal M, King RA, Xu J, Meyers DA, Bleecker ER, Cox NJ (2000) Am J Hum Genet 66(2): 517-26
    › Primary publication · 10677312 (PubMed) · PMC1288105 (PubMed Central)
  213. Genome-wide screen for atopy susceptibility alleles in the Hutterites. Ober C, Tsalenko A, Willadsen S, Newman D, Daniel R, Wu X, Andal J, Hoki D, Schneider D, True K, Schou C, Parry R, Cox N (1999) Clin Exp Allergy : 11-5
    › Primary publication · 10641559 (PubMed)
  214. Two different mutations in the thyroid peroxidase gene of a large inbred Amish kindred: power and limits of homozygosity mapping. Pannain S, Weiss RE, Jackson CE, Dian D, Beck JC, Sheffield VC, Cox N, Refetoff S (1999) J Clin Endocrinol Metab 84(3): 1061-71
    › Primary publication · 10084596 (PubMed)
  215. Loci on chromosomes 2 (NIDDM1) and 15 interact to increase susceptibility to diabetes in Mexican Americans. Cox NJ, Frigge M, Nicolae DL, Concannon P, Hanis CL, Bell GI, Kong A (1999) Nat Genet 21(2): 213-5
    › Primary publication · 9988276 (PubMed)
  216. Genome-wide search for asthma susceptibility loci in a founder population. The Collaborative Study on the Genetics of Asthma. Ober C, Cox NJ, Abney M, Di Rienzo A, Lander ES, Changyaleket B, Gidley H, Kurtz B, Lee J, Nance M, Pettersson A, Prescott J, Richardson A, Schlenker E, Summerhill E, Willadsen S, Parry R (1998) Hum Mol Genet 7(9): 1393-8
    › Primary publication · 9700192 (PubMed)
  217. A second-generation screen of the human genome for susceptibility to insulin-dependent diabetes mellitus. Concannon P, Gogolin-Ewens KJ, Hinds DA, Wapelhorst B, Morrison VA, Stirling B, Mitra M, Farmer J, Williams SR, Cox NJ, Bell GI, Risch N, Spielman RS (1998) Nat Genet 19(3): 292-6
    › Primary publication · 9662408 (PubMed)
  218. The genetics of asthma. Mapping genes for complex traits in founder populations. Ober C, Cox NJ (1998) Clin Exp Allergy : 101-5; discussion 108-10
    › Primary publication · 9641605 (PubMed)
  219. Linkage-disequilibrium mapping of autistic disorder, with 15q11-13 markers. Cook EH, Courchesne RY, Cox NJ, Lord C, Gonen D, Guter SJ, Lincoln A, Nix K, Haas R, Leventhal BL, Courchesne E (1998) Am J Hum Genet 62(5): 1077-83
    › Primary publication · 9545402 (PubMed) · PMC1377089 (PubMed Central)
  220. Allele-sharing models: LOD scores and accurate linkage tests. Kong A, Cox NJ (1997) Am J Hum Genet 61(5): 1179-88
    › Primary publication · 9345087 (PubMed) · PMC1716027 (PubMed Central)
  221. Diabetes, dependence, asymptotics, selection and significance. Kong A, Frigge M, Bell GI, Lander ES, Daly MJ, Cox NJ (1997) Nat Genet 17(2): 148
    › Primary publication · 9326932 (PubMed)
  222. HLA and mate choice in humans. Ober C, Weitkamp LR, Cox N, Dytch H, Kostyu D, Elias S (1997) Am J Hum Genet 61(3): 497-504
    › Primary publication · 9326314 (PubMed) · PMC1715964 (PubMed Central)
  223. Accurate inference of relationships in sib-pair linkage studies. Boehnke M, Cox NJ (1997) Am J Hum Genet 61(2): 423-9
    › Primary publication · 9311748 (PubMed) · PMC1715905 (PubMed Central)
  224. The genetic basis of persistence and recovery in stuttering. Ambrose NG, Cox NJ, Yairi E (1997) J Speech Lang Hear Res 40(3): 567-80
    › Primary publication · 9210115 (PubMed)
  225. The 31-cM region of chromosome 11 including the obesity gene tubby and ATP-sensitive potassium channel genes, SUR1 and Kir6.2, does not contain a major susceptibility locus for NIDDM in 127 non-Hispanic white affected sibships. Lindner T, Gragnoli C, Schulze J, Rietzsch H, Petzold C, Schröder HE, Cox NJ, Bell GI (1997) Diabetes 46(7): 1227-9
    › Primary publication · 9200660 (PubMed)
  226. Evidence of linkage between the serotonin transporter and autistic disorder. Cook EH, Courchesne R, Lord C, Cox NJ, Yan S, Lincoln A, Haas R, Courchesne E, Leventhal BL (1997) Mol Psychiatry 2(3): 247-50
    › Primary publication · 9152989 (PubMed)
  227. Mutations in the hepatocyte nuclear factor-4alpha gene in maturity-onset diabetes of the young (MODY1) Yamagata K, Furuta H, Oda N, Kaisaki PJ, Menzel S, Cox NJ, Fajans SS, Signorini S, Stoffel M, Bell GI (1996) Nature 384(6608): 458-60
    › Primary publication · 8945471 (PubMed)
  228. Mutations in the hepatocyte nuclear factor-1alpha gene in maturity-onset diabetes of the young (MODY3) Yamagata K, Oda N, Kaisaki PJ, Menzel S, Furuta H, Vaxillaire M, Southam L, Cox RD, Lathrop GM, Boriraj VV, Chen X, Cox NJ, Oda Y, Yano H, Le Beau MM, Yamada S, Nishigori H, Takeda J, Fajans SS, Hattersley AT, Iwasaki N, Hansen T, Pedersen O, Polonsky KS, Bell GI (1996) Nature 384(6608): 455-8
    › Primary publication · 8945470 (PubMed)
  229. Hypertriglyceridemia and the apolipoprotein CIII gene locus: lack of association with the variant insulin response element in Italian school children. Shoulders CC, Grantham TT, North JD, Gaspardone A, Tomai F, de Fazio A, Versaci F, Gioffre PA, Cox NJ (1996) Hum Genet 98(5): 557-66
    › Primary publication · 8882875 (PubMed)
  230. Genetics of stuttering: a critical review. Yairi E, Ambrose N, Cox N (1996) J Speech Hear Res 39(4): 771-84
    › Primary publication · 8844557 (PubMed)
  231. Linkage studies in NIDDM with markers near the sulphonylurea receptor gene. Stirling B, Cox NJ, Bell GI, Hanis CL, Spielman RS, Concannon P (1995) Diabetologia 38(12): 1479-81
    › Primary publication · 8786023 (PubMed)
  232. Searching for NIDDM susceptibility genes: studies of genes with triplet repeats expressed in skeletal muscle. Yamagata K, Takeda J, Menzel S, Chen X, Eng S, Lim LR, Concannon P, Hanis CL, Spielman RS, Cox NJ, Bell GI (1996) Diabetologia 39(6): 725-30
    › Primary publication · 8781769 (PubMed)
  233. A genome-wide search for human non-insulin-dependent (type 2) diabetes genes reveals a major susceptibility locus on chromosome 2. Hanis CL, Boerwinkle E, Chakraborty R, Ellsworth DL, Concannon P, Stirling B, Morrison VA, Wapelhorst B, Spielman RS, Gogolin-Ewens KJ, Shepard JM, Williams SR, Risch N, Hinds D, Iwasaki N, Ogata M, Omori Y, Petzold C, Rietzch H, Schröder HE, Schulze J, Cox NJ, Menzel S, Boriraj VV, Chen X, Lim LR, Lindner T, Mereu LE, Wang YQ, Xiang K, Yamagata K, Yang Y, Bell GI (1996) Nat Genet 13(2): 161-6
    › Primary publication · 8640221 (PubMed)
  234. A yeast artificial chromosome-based map of the region of chromosome 20 containing the diabetes-susceptibility gene, MODY1, and a myeloid leukemia related gene. Stoffel M, Le Beau MM, Espinosa R, Bohlander SF, Le Paslier D, Cohen D, Xiang KS, Cox NJ, Fajans SS, Bell GI (1996) Proc Natl Acad Sci U S A 93(9): 3937-41
    › Primary publication · 8632993 (PubMed) · PMC39463 (PubMed Central)
  235. An approach for identifying simple sequence repeat DNA polymorphisms near cloned cDNAs and genes. Linkage studies of the islet amyloid polypeptide/amylin and liver glycogen synthase genes and NIDDM. Gambino V, Menzel S, Trabb JB, Xiang KS, Lindner T, Louït A, Chen E, Mereu LE, Furuta H, Iwasaki N, Kawamura M, Omori Y, Rietzsch H, Schulze J, Schröder HE, Concannon P, Hanis CL, Spielman RS, Yamagata K, Cox NJ, Bell GI (1996) Diabetes 45(3): 291-4
    › Primary publication · 8593932 (PubMed)
  236. Identification of microsatellite markers near the human genes encoding the beta-cell ATP-sensitive K+ channel and linkage studies with NIDDM in Japanese. Iwasaki N, Kawamura M, Yamagata K, Cox NJ, Karibe S, Ohgawara H, Inagaki N, Seino S, Bell GI, Omori Y (1996) Diabetes 45(2): 267-9
    › Primary publication · 8549873 (PubMed)
  237. cDNA sequence and localization of polymorphic human cytosolic phosphoenolpyruvate carboxykinase gene (PCK1) to chromosome 20, band q13.31: PCK1 is not tightly linked to maturity-onset diabetes of the young. Stoffel M, Xiang KS, Espinosa R, Cox NJ, Le Beau MM, Bell GI (1993) Hum Mol Genet 2(1): 1-4
    › Primary publication · 8490617 (PubMed)
  238. Genetic aspects of early childhood stuttering. Ambrose NG, Yairi E, Cox N (1993) J Speech Hear Res 36(4): 701-6
    › Primary publication · 8377483 (PubMed)
  239. Segregation analysis of speech and language disorders. Lewis BA, Cox NJ, Byard PJ (1993) Behav Genet 23(3): 291-7
    › Primary publication · 8352725 (PubMed)
  240. Sequential imputation and multipoint linkage analysis. Kong A, Cox N, Frigge M, Irwin M (1993) Genet Epidemiol 10(6): 483-8
    › Primary publication · 8314048 (PubMed)
  241. Maternal component in NIDDM transmission. How large an effect? Cox NJ (1994) Diabetes 43(1): 166-8
    › Primary publication · 8262313 (PubMed)
  242. Stuttering: a complex behavioral disorder for our times? Cox NJ (1993) Am J Med Genet 48(4): 177-8
    › Primary publication · 8135299 (PubMed)
  243. Sequential imputation for multilocus linkage analysis. Irwin M, Cox N, Kong A (1994) Proc Natl Acad Sci U S A 91(24): 11684-8
    › Primary publication · 7972124 (PubMed) · PMC45296 (PubMed Central)
  244. Linkage of familial dysalbuminemic hyperthyroxinemia to the albumin gene in a large Amish kindred. Weiss RE, Sunthornthepvarakul T, Angkeow P, Marcus-Bagley D, Cox N, Alper CA, Refetoff S (1995) J Clin Endocrinol Metab 80(1): 116-21
    › Primary publication · 7829599 (PubMed)
  245. Isolation of a cDNA clone encoding a KATP channel-like protein expressed in insulin-secreting cells, localization of the human gene to chromosome band 21q22.1, and linkage studies with NIDDM. Tsaur ML, Menzel S, Lai FP, Espinosa R, Concannon P, Spielman RS, Hanis CL, Cox NJ, Le Beau MM, German MS (1995) Diabetes 44(5): 592-6
    › Primary publication · 7729621 (PubMed)
  246. Association of attention-deficit disorder and the dopamine transporter gene. Cook EH, Stein MA, Krasowski MD, Cox NJ, Olkon DM, Kieffer JE, Leventhal BL (1995) Am J Hum Genet 56(4): 993-8
    › Primary publication · 7717410 (PubMed) · PMC1801209 (PubMed Central)
  247. Recombinant mapping of the familial hyperinsulinism gene to an 0.8 cM region on chromosome 11p15.1 and demonstration of a founder effect in Ashkenazi Jews. Glaser B, Chiu KC, Liu L, Anker R, Nestorowicz A, Cox NJ, Landau H, Kaiser N, Thornton PS, Stanley CA (1995) Hum Mol Genet 4(5): 879-86
    › Primary publication · 7633448 (PubMed)
  248. Identification of microsatellite markers near the human ob gene and linkage studies in NIDDM-affected sib pairs. Stirling B, Cox NJ, Bell GI, Hanis CL, Spielman RS, Concannon P (1995) Diabetes 44(8): 999-1001
    › Primary publication · 7622007 (PubMed)
  249. Localization of MODY3 to a 5-cM region of human chromosome 12. Menzel S, Yamagata K, Trabb JB, Nerup J, Permutt MA, Fajans SS, Menzel R, Iwasaki N, Omori Y, Cox NJ (1995) Diabetes 44(12): 1408-13
    › Primary publication · 7589847 (PubMed)
  250. Can recovery from stuttering be considered a genetically milder subtype of stuttering? Cox NJ, Kidd KK (1983) Behav Genet 13(2): 129-39
    › Primary publication · 6860250 (PubMed)
  251. Lithium ion transport and affective disorders within families of bipolar patients. Identification of a major gene locus. Dorus E, Cox NJ, Gibbons RD, Shaughnessy R, Pandey GN, Cloninger CR (1983) Arch Gen Psychiatry 40(5): 545-52
    › Primary publication · 6838332 (PubMed)
  252. The detection of major loci by segregation and linkage analysis: a simulation study. Goldin LR, Cox NJ, Pauls DL, Gershon ES, Kidd KK (1984) Genet Epidemiol 1(3): 285-96
    › Primary publication · 6599402 (PubMed)
  253. Segregation analyses of stuttering. Cox NJ, Kramer PL, Kidd KK (1984) Genet Epidemiol 1(3): 245-53
    › Primary publication · 6549563 (PubMed)
  254. Some environmental factors and hypotheses for stuttering in families with several stutterers. Cox NJ, Seider RA, Kidd KK (1984) J Speech Hear Res 27(4): 543-8
    › Primary publication · 6521460 (PubMed)
  255. Linkage analysis for psychiatric disorders. I. Basic concepts. Suarez BK, Cox NJ (1985) Psychiatr Dev 3(3): 219-43
    › Primary publication · 3906645 (PubMed)
  256. Ascertainment considerations in the analysis of affected sib shared haplotype data. Ewens WJ, Shute NC, Cox NJ, Price RA, Spielman RS (1986) Genet Epidemiol Suppl : 319-22
    › Primary publication · 3569862 (PubMed)
  257. Linkage studies of maturity onset diabetes of the young--R.W. pedigree. Vinik AJ, Cox NJ, Xiang K, Fajans SS, Bell GI (1988) Diabetologia 31(10): 778
    › Primary publication · 3240841 (PubMed)
  258. Inheritance of human platelet thermolabile phenol sulfotransferase (TL PST) activity. Price RA, Cox NJ, Spielman RS, Van Loon JA, Maidak BL, Weinshilboum RM (1988) Genet Epidemiol 5(1): 1-15
    › Primary publication · 3162891 (PubMed)
  259. Some effects of selection strategies on linkage analysis. Cox NJ, Hodge SE, Marazita ML, Spence MA, Kidd KK (1988) Genet Epidemiol 5(4): 289-97
    › Primary publication · 3049227 (PubMed)
  260. Linkage analysis for psychiatric disorders. II. Methodological considerations. Cox NJ, Suarez BK (1985) Psychiatr Dev 3(4): 369-82
    › Primary publication · 3006022 (PubMed)
  261. [The association of non-insulin-dependent diabetes mellitus with the genes responsible for carbohydrate and lipid metabolism in the Chinese]. Xiang KS, Bell GI, Karam JH, Cox NJ, Sanz N, Huang P (1988) Zhonghua Yi Xue Za Zhi 68(10): 552-6, 38
    › Primary publication · 2907412 (PubMed)
  262. Variation of apolipoprotein-B gene is associated with obesity, high blood cholesterol levels, and increased risk of coronary heart disease. Rajput-Williams J, Knott TJ, Wallis SC, Sweetnam P, Yarnell J, Cox N, Bell GI, Miller NE, Scott J (1988) Lancet 2(8626-8627): 1442-6
    › Primary publication · 2904569 (PubMed)
  263. HLA-DR typing "at the DNA level": RFLPs and subtypes detected with a DR beta cDNA probe. Cox NJ, Mela AP, Zmijewski CM, Spielman RS (1988) Am J Hum Genet 43(6): 954-63
    › Primary publication · 2904222 (PubMed) · PMC1715604 (PubMed Central)
  264. Linkage disequilibrium in the human insulin/insulin-like growth factor II region of human chromosome II. Cox NJ, Bell GI, Xiang KS (1988) Am J Hum Genet 43(4): 495-501
    › Primary publication · 2902788 (PubMed) · PMC1715486 (PubMed Central)
  265. Four RFLPs of the human insulin receptor gene: PstI, KpnI, RsaI (2 RFLPs). Cox NJ, Spielman RS, Kahn CR, Müller-Wieland D, Kriauciunas KM, Taub R (1988) Nucleic Acids Res 16(16): 8204
    › Primary publication · 2901723 (PubMed) · PMC338546 (PubMed Central)
  266. Glucose transporter gene and non-insulin-dependent diabetes. Cox NJ, Xiang KS, Bell GI, Karam JH (1988) Lancet 2(8614): 793-4
    › Primary publication · 2901632 (PubMed)
  267. Apa I and Sst I RFLPs at the insulin-like growth factor II (IGF2) locus on chromosome 11. Xiang K, Cox NJ, Bell GI (1988) Nucleic Acids Res 16(8): 3599
    › Primary publication · 2897668 (PubMed) · PMC336539 (PubMed Central)
  268. Insulin-gene sharing in sib pairs with insulin-dependent diabetes mellitus: no evidence for linkage. Cox NJ, Baker L, Spielman RS (1988) Am J Hum Genet 42(1): 167-72
    › Primary publication · 2892397 (PubMed) · PMC1715306 (PubMed Central)
  269. Bgl II RFLP at the human erythrocyte/HepG2-type glucose transporter (GLUT) locus on chromosome 1. Xiang K, Cox NJ, Karam JH, Bell GI (1987) Nucleic Acids Res 15(21): 9101
    › Primary publication · 2891109 (PubMed) · PMC306447 (PubMed Central)
  270. Segregation and linkage analyses of bipolar and major depressive illnesses in multigenerational pedigrees. Cox N, Reich T, Rice J, Elston R, Schober J, Keats B (1989) J Psychiatr Res 23(2): 109-23
    › Primary publication · 2585343 (PubMed)
  271. Disease associations. Chance, artifact, or susceptibility genes? Cox NJ, Bell GI (1989) Diabetes 38(8): 947-50
    › Primary publication · 2568956 (PubMed)
  272. The insulin gene and susceptibility to IDDM. Cox NJ, Spielman RS (1989) Genet Epidemiol 6(1): 65-9
    › Primary publication · 2567260 (PubMed)
  273. Restriction fragment polymorphisms of the HLA-DR, HLA-DQ, and insulin gene regions in IDDM: the GAW5 data. Cox NJ, Gogolin KJ, Horvath VJ, Barker DF, Wright E, Tran T, Skolnick MH, Boehm BO, Fehsel K, Bertrams J (1989) Genet Epidemiol 6(1): 21-6
    › Primary publication · 2567259 (PubMed)
  274. Linkage studies on NIDDM and the insulin and insulin-receptor genes. Cox NJ, Epstein PA, Spielman RS (1989) Diabetes 38(5): 653-8
    › Primary publication · 2565838 (PubMed)
  275. Insulin-receptor and apolipoprotein genes contribute to development of NIDDM in Chinese Americans. Xiang KS, Cox NJ, Sanz N, Huang P, Karam JH, Bell GI (1989) Diabetes 38(1): 17-23
    › Primary publication · 2562831 (PubMed)
  276. Polymorphisms of GLUT2 and GLUT4 genes. Use in evaluation of genetic susceptibility to NIDDM in blacks. Matsutani A, Koranyi L, Cox N, Permutt MA (1990) Diabetes 39(12): 1534-42
    › Primary publication · 1978828 (PubMed)
  277. Gene for non-insulin-dependent diabetes mellitus (maturity-onset diabetes of the young subtype) is linked to DNA polymorphism on human chromosome 20q. Bell GI, Xiang KS, Newman MV, Wu SH, Wright LG, Fajans SS, Spielman RS, Cox NJ (1991) Proc Natl Acad Sci U S A 88(4): 1484-8
    › Primary publication · 1899928 (PubMed) · PMC51043 (PubMed Central)
  278. Linkage analysis with adjustment for covariates: a method combining peeling with Gibbs sampling. Kong A, Frigge M, Cox N, Wong WH (1992) Cytogenet Cell Genet 59(2-3): 208-10
    › Primary publication · 1737503 (PubMed)
  279. Genetic factors in autoimmune thyroid disease analyzed by restriction fragment length polymorphisms of candidate genes. Mangklabruks A, Cox N, DeGroot LJ (1991) J Clin Endocrinol Metab 73(2): 236-44
    › Primary publication · 1677360 (PubMed)
  280. Genetic linkage studies of thyroid peroxidase (TPO) gene in families with TPO deficiency. Mangklabruks A, Billerbeck AE, Wajchenberg B, Knobel M, Cox NJ, DeGroot LJ, Medeiros-Neto G (1991) J Clin Endocrinol Metab 72(2): 471-6
    › Primary publication · 1671388 (PubMed)
  281. Mapping diabetes-susceptibility genes. Lessons learned from search for DNA marker for maturity-onset diabetes of the young. Cox NJ, Xiang KS, Fajans SS, Bell GI (1992) Diabetes 41(4): 401-7
    › Primary publication · 1607066 (PubMed)
  282. Importance sampling. I. Computing multimodel p values in linkage analysis. Kong A, Frigge M, Irwin M, Cox N (1992) Am J Hum Genet 51(6): 1413-29
    › Primary publication · 1463020 (PubMed) · PMC1682914 (PubMed Central)