Keyword Connections

•  Chandra Osborn

•  Chris Howard

•  Jean-Philippe Cartailler

Resources

• Mouse Nomenclature

Communities

• Carr Lab
• High Throughput Screening Facility
• Vanderbilt Creative Data Solutions Shared Resource
• VCSCB Informatics

Publications

• Leveraging the electronic health record to implement genomic medicine.
  Kullo IJ, Jarvik GP, Manolio TA, Williams MS, Roden DM
  (2013) Genet Med 15: 270-1
• Return of individual research results from genome-wide association studies: experience of the Electronic Medical Records and Genomics (eMERGE) Network.
  Fullerton SM, Wolf WA, Brothers KB, Clayton EW, Crawford DC, Denny JC, Greenland P, Koenig BA, Leppig KA, Lindor NM, McCarty CA, McGuire AL, McPeek Hinz ER, Mirel DB, Ramos EM, Ritchie MD, Smith ME, Waudby CJ, Burke W, Jarvik GP
  (2012) Genet Med 14: 424-31
• Establishing a tumour bank: banking, informatics and ethics.
  Qualman SJ, France M, Grizzle WE, LiVolsi VA, Moskaluk CA, Ramirez NC, Washington MK
  (2004) Br J Cancer 90: 1115-9
• Linking molecular and bedside research: designing a clinical research infrastructure.
  Robertson D, Tung CS
  (2001) J Mol Med (Berl) 79: 686-94
• Integrating EMR-linked and in vivo functional genetic data to identify new genotype-phenotype associations.
  Mosley JD, Van Driest SL, Weeke PE, Delaney JT, Wells QS, Bastarache L, Roden DM, Denny JC
  (2014) PLoS One 9: e100322
• Current and future trends in imaging informatics for oncology.
  Levy MA, Rubin DL
  (2011) Cancer J 17: 203-10
• Roadmap for the development of the University of North Carolina at Chapel Hill Genitourinary OncoLogy Database--UNC GOLD.
  Gallagher SA, Smith AB, Matthews JE, Potter CW, Woods ME, Raynor M, Wallen EM, Rathmell WK, Whang YE, Kim WY, Godley PA, Chen RC, Wang A, You C, Barocas DA, Pruthi RS, Nielsen ME, Milowsky MI
  (2014) Urol Oncol 32: 32.e1-9
• A technology-based patient and family engagement consult service for the pediatric hospital setting.
  Jackson GP, Robinson JR, Ingram E, Masterman M, Ivory C, Holloway D, Anders S, Cronin RM
  (2018) J Am Med Inform Assoc 25: 167-174
• Policy and the future of adverse event detection using information technology.
  Bates DW, Evans RS, Murff H, Stetson PD, Pizziferri L, Hripcsak G
  (2003) J Am Med Inform Assoc 10: 226-8
• Detecting adverse events using information technology.
  Bates DW, Evans RS, Murff H, Stetson PD, Pizziferri L, Hripcsak G
  (2003) J Am Med Inform Assoc 10: 115-28
• Electronically screening discharge summaries for adverse medical events.
  Murff HJ, Forster AJ, Peterson JF, Fiskio JM, Heiman HL, Bates DW
  (2003) J Am Med Inform Assoc 10: 339-50
• Evolution of a mature clinical informationist model.
  Giuse NB, Koonce TY, Jerome RN, Cahall M, Sathe NA, Williams A
  (2005) J Am Med Inform Assoc 12: 249-55
• Enhancing patient safety and quality of care by improving the usability of electronic health record systems: recommendations from AMIA.
  Middleton B, Bloomrosen M, Dente MA, Hashmat B, Koppel R, Overhage JM, Payne TH, Rosenbloom ST, Weaver C, Zhang J, American Medical Informatics Association
  (2013) J Am Med Inform Assoc 20: e2-8
• A longitudinal social network analysis of the editorial boards of medical informatics and bioinformatics journals.
  Malin B, Carley K
  (2007) J Am Med Inform Assoc 14: 340-8
• Harnessing next-generation informatics for personalizing medicine: a report from AMIA's 2014 Health Policy Invitational Meeting.
  Wiley LK, Tarczy-Hornoch P, Denny JC, Freimuth RR, Overby CL, Shah N, Martin RD, Sarkar IN
  (2016) J Am Med Inform Assoc 23: 413-9
• Precision medicine informatics.
  Frey LJ, Bernstam EV, Denny JC
  (2016) J Am Med Inform Assoc 23: 668-70
• Performing without a net: transitioning away from a health information technology-rich training environment.
  Johnson K, Chark D, Chen Q, Broussard A, Rosenbloom ST
  (2008) Acad Med 83: 1179-86
• An informatics-based tool to assist researchers in initiating research at an academic medical center: Vanderbilt Customized Action Plan.
  Pulley JM, Harris PA, Yarbrough T, Swafford J, Edwards T, Bernard GR
  (2010) Acad Med 85: 164-8
• Intelligent use and clinical benefits of electronic health records in rheumatoid arthritis.
  Carroll RJ, Eyler AE, Denny JC
  (2015) Expert Rev Clin Immunol 11: 329-37
• Application of capture-recapture methodology to estimate the prevalence of dementia in South Carolina.
  Sanderson M, Benjamin JT, Lane MJ, Cornman CB, Davis DR
  (2003) Ann Epidemiol 13: 518-24
• Tracking medical students' clinical experiences using natural language processing.
  Denny JC, Bastarache L, Sastre EA, Spickard A
  (2009) J Biomed Inform 42: 781-9
• Playing smallball: approaches to evaluating pilot health information exchange systems.
  Johnson KB, Gadd C
  (2007) J Biomed Inform 40: S21-6
• MyMediHealth - designing a next generation system for child-centered medication management.
  Slagle JM, Gordon JS, Harris CE, Davison CL, Culpepper DK, Scott P, Johnson KB
  (2010) J Biomed Inform 43: S27-S31
• The use of receiver operating characteristic curves in biomedical informatics.
  Lasko TA, Bhagwat JG, Zou KH, Ohno-Machado L
  (2005) J Biomed Inform 38: 404-15
• Learning bundled care opportunities from electronic medical records.
  Chen Y, Kho AN, Liebovitz D, Ivory C, Osmundson S, Bian J, Malin BA
  (2018) J Biomed Inform 77: 1-10
• PARAMO: a PARAllel predictive MOdeling platform for healthcare analytic research using electronic health records.
  Ng K, Ghoting A, Steinhubl SR, Stewart WF, Malin B, Sun J
  (2014) J Biomed Inform 48: 160-70
• StarBRITE: the Vanderbilt University Biomedical Research Integration, Translation and Education portal.
  Harris PA, Swafford JA, Edwards TL, Zhang M, Nigavekar SS, Yarbrough TR, Lane LD, Helmer T, Lebo LA, Mayo G, Masys DR, Bernard GR, Pulley JM
  (2011) J Biomed Inform 44: 655-62
• Informatics methods to enable sharing of quantitative imaging research data.
  Levy MA, Freymann JB, Kirby JS, Fedorov A, Fennessy FM, Eschrich SA, Berglund AE, Fenstermacher DA, Tan Y, Guo X, Casavant TL, Brown BJ, Braun TA, Dekker A, Roelofs E, Mountz JM, Boada F, Laymon C, Oborski M, Rubin DL
  (2012) Magn Reson Imaging 30: 1249-56
• An active learning-enabled annotation system for clinical named entity recognition.
  Chen Y, Lask TA, Mei Q, Chen Q, Moon S, Wang J, Nguyen K, Dawodu T, Cohen T, Denny JC, Xu H
  (2017) BMC Med Inform Decis Mak 17: 82
• The deployment of a tissue request tracking system for the CHTN: a case study in managing change in informatics for biobanking operations.
  Edgerton ME, Grizzle WE, Washington MK
  (2010) BMC Med Inform Decis Mak 10: 32
• Increasing nurses' access to evidence through a web-based resource.
  League K, Christenbery T, Sandlin V, Arnow D, Moss K, Wells N
  (2012) J Nurs Adm 42: 531-5
• Quantitative computed tomography imaging of interstitial lung diseases.
  Bartholmai BJ, Raghunath S, Karwoski RA, Moua T, Rajagopalan S, Maldonado F, Decker PA, Robb RA
  (2013) J Thorac Imaging 28: 298-307