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Creative Data Solutions (CDS) is a Vanderbilt Shared Resource and has extensive experience in providing effective and robust solutions to challenges pertaining to research data using modern informatics and bioinformatics approaches.
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- Helicobacter pylori and gastrointestinal tract adenocarcinomas.
Peek RM, Blaser MJ
(2002) Nat Rev Cancer 2: 28-37 - Global analysis of Helicobacter pylori gene expression in human gastric mucosa.
Graham JE, Peek RM, Krishna U, Cover TL
(2002) Gastroenterology 123: 1637-48 - Regulation of p53 tumor suppressor by Helicobacter pylori in gastric epithelial cells.
Wei J, Nagy TA, Vilgelm A, Zaika E, Ogden SR, Romero-Gallo J, Piazuelo MB, Correa P, Washington MK, El-Rifai W, Peek RM, Zaika A
(2010) Gastroenterology 139: 1333-43 - β-Catenin and p120 mediate PPARδ-dependent proliferation induced by Helicobacter pylori in human and rodent epithelia.
Nagy TA, Wroblewski LE, Wang D, Piazuelo MB, Delgado A, Romero-Gallo J, Noto J, Israel DA, Ogden SR, Correa P, Cover TL, Peek RM
(2011) Gastroenterology 141: 553-64 - Spermine oxidase mediates the gastric cancer risk associated with Helicobacter pylori CagA.
Chaturvedi R, Asim M, Romero-Gallo J, Barry DP, Hoge S, de Sablet T, Delgado AG, Wroblewski LE, Piazuelo MB, Yan F, Israel DA, Casero RA, Correa P, Gobert AP, Polk DB, Peek RM, Wilson KT
(2011) Gastroenterology 141: 1696-708.e1-2 - Helicobacter pylori alters gastric epithelial cell cycle events and gastrin secretion in Mongolian gerbils.
Peek RM, Wirth HP, Moss SF, Yang M, Abdalla AM, Tham KT, Zhang T, Tang LH, Modlin IM, Blaser MJ
(2000) Gastroenterology 118: 48-59 - MEK Inhibitor Reverses Metaplasia and Allows Re-Emergence of Normal Lineages in Helicobacter pylori-Infected Gerbils.
Yang Q, Yasuda T, Choi E, Toyoda T, Roland JT, Uchida E, Yoshida H, Seto Y, Goldenring JR, Nomura S
(2019) Gastroenterology 156: 577-581.e4 - Dicarbonyl Electrophiles Mediate Inflammation-Induced Gastrointestinal Carcinogenesis.
Gobert AP, Boutaud O, Asim M, Zagol-Ikapitte IA, Delgado AG, Latour YL, Finley JL, Singh K, Verriere TG, Allaman MM, Barry DP, McNamara KM, Sierra JC, Amarnath V, Tantawy MN, Bimczok D, Piazuelo MB, Washington MK, Zhao S, Coburn LA, Wilson KT
(2021) Gastroenterology 160: 1256-1268.e9 - Helicobacter pylori strain-specific differences in genetic content, identified by microarray, influence host inflammatory responses.
Israel DA, Salama N, Arnold CN, Moss SF, Ando T, Wirth HP, Tham KT, Camorlinga M, Blaser MJ, Falkow S, Peek RM
(2001) J Clin Invest 107: 611-20 - Iron deficiency accelerates Helicobacter pylori-induced carcinogenesis in rodents and humans.
Noto JM, Gaddy JA, Lee JY, Piazuelo MB, Friedman DB, Colvin DC, Romero-Gallo J, Suarez G, Loh J, Slaughter JC, Tan S, Morgan DR, Wilson KT, Bravo LE, Correa P, Cover TL, Amieva MR, Peek RM
(2013) J Clin Invest 123: 479-92 - Epidermal growth factor receptor inhibition downregulates -induced epithelial inflammatory responses, DNA damage and gastric carcinogenesis.
Sierra JC, Asim M, Verriere TG, Piazuelo MB, Suarez G, Romero-Gallo J, Delgado AG, Wroblewski LE, Barry DP, Peek RM, Gobert AP, Wilson KT
(2018) Gut 67: 1247-1260 - α-Difluoromethylornithine reduces gastric carcinogenesis by causing mutations in .
Sierra JC, Suarez G, Piazuelo MB, Luis PB, Baker DR, Romero-Gallo J, Barry DP, Schneider C, Morgan DR, Peek RM, Gobert AP, Wilson KT
(2019) Proc Natl Acad Sci U S A 116: 5077-5085 - Activation of beta-catenin by carcinogenic Helicobacter pylori.
Franco AT, Israel DA, Washington MK, Krishna U, Fox JG, Rogers AB, Neish AS, Collier-Hyams L, Perez-Perez GI, Hatakeyama M, Whitehead R, Gaus K, O'Brien DP, Romero-Gallo J, Peek RM
(2005) Proc Natl Acad Sci U S A 102: 10646-51 - Pathogenic bacterium Helicobacter pylori alters the expression profile of p53 protein isoforms and p53 response to cellular stresses.
Wei J, Noto J, Zaika E, Romero-Gallo J, Correa P, El-Rifai W, Peek RM, Zaika A
(2012) Proc Natl Acad Sci U S A 109: E2543-50 - Modification of Helicobacter pylori Peptidoglycan Enhances NOD1 Activation and Promotes Cancer of the Stomach.
Suarez G, Romero-Gallo J, Piazuelo MB, Wang G, Maier RJ, Forsberg LS, Azadi P, Gomez MA, Correa P, Peek RM
(2015) Cancer Res 75: 1749-59 - Genetic Manipulation of Virulence Function by Host Carcinogenic Phenotypes.
Suarez G, Romero-Gallo J, Sierra JC, Piazuelo MB, Krishna US, Gomez MA, Wilson KT, Peek RM
(2017) Cancer Res 77: 2401-2412 - Helicobacter pylori cytotoxin-associated gene A activates the signal transducer and activator of transcription 3 pathway in vitro and in vivo.
Bronte-Tinkew DM, Terebiznik M, Franco A, Ang M, Ahn D, Mimuro H, Sasakawa C, Ropeleski MJ, Peek RM, Jones NL
(2009) Cancer Res 69: 632-9 - Regulation of gastric carcinogenesis by Helicobacter pylori virulence factors.
Franco AT, Johnston E, Krishna U, Yamaoka Y, Israel DA, Nagy TA, Wroblewski LE, Piazuelo MB, Correa P, Peek RM
(2008) Cancer Res 68: 379-87 - Characterization of progressive metaplasia in the gastric corpus mucosa of Mongolian gerbils infected with Helicobacter pylori.
Shimizu T, Choi E, Petersen CP, Noto JM, Romero-Gallo J, Piazuelo MB, Washington MK, Peek RM, Goldenring JR
(2016) J Pathol 239: 399-410 - Increased Helicobacter pylori-associated gastric cancer risk in the Andean region of Colombia is mediated by spermine oxidase.
Chaturvedi R, de Sablet T, Asim M, Piazuelo MB, Barry DP, Verriere TG, Sierra JC, Hardbower DM, Delgado AG, Schneider BG, Israel DA, Romero-Gallo J, Nagy TA, Morgan DR, Murray-Stewart T, Bravo LE, Peek RM, Fox JG, Woster PM, Casero RA, Correa P, Wilson KT
(2015) Oncogene 34: 3429-40 - Carcinogenic Strains Selectively Dysregulate the Gastric Proteome, Which May Be Associated with Stomach Cancer Progression.
Noto JM, Rose KL, Hachey AJ, Delgado AG, Romero-Gallo J, Wroblewski LE, Schneider BG, Shah SC, Cover TL, Wilson KT, Israel DA, Roa JC, Schey KL, Zavros Y, Piazuelo MB, Peek RM
(2019) Mol Cell Proteomics 18: 352-371 - Delineation of a carcinogenic Helicobacter pylori proteome.
Franco AT, Friedman DB, Nagy TA, Romero-Gallo J, Krishna U, Kendall A, Israel DA, Tegtmeyer N, Washington MK, Peek RM
(2009) Mol Cell Proteomics 8: 1947-58 - An essential role for modulation of hyperpolarization-activated current in the development of binaural temporal precision.
Khurana S, Liu Z, Lewis AS, Rosa K, Chetkovich D, Golding NL
(2012) J Neurosci 32: 2814-23 - Helicobacter pylori bacteria alter the p53 stress response via ERK-HDM2 pathway.
Bhardwaj V, Noto JM, Wei J, Andl C, El-Rifai W, Peek RM, Zaika AI
(2015) Oncotarget 6: 1531-43 - Regulation of Helicobacter pylori Virulence Within the Context of Iron Deficiency.
Noto JM, Lee JY, Gaddy JA, Cover TL, Amieva MR, Peek RM
(2015) J Infect Dis 211: 1790-4 - Genetic Evolution of a Helicobacter pylori Acid-Sensing Histidine Kinase and Gastric Disease.
Krishna U, Romero-Gallo J, Suarez G, Azah A, Krezel AM, Varga MG, Forsyth MH, Peek RM
(2016) J Infect Dis 214: 644-8 - Hydrogen Metabolism in Helicobacter pylori Plays a Role in Gastric Carcinogenesis through Facilitating CagA Translocation.
Wang G, Romero-Gallo J, Benoit SL, Piazuelo MB, Dominguez RL, Morgan DR, Peek RM, Maier RJ
(2016) mBio 7: - Expression of the BabA adhesin during experimental infection with Helicobacter pylori.
Styer CM, Hansen LM, Cooke CL, Gundersen AM, Choi SS, Berg DE, Benghezal M, Marshall BJ, Peek RM, Borén T, Solnick JV
(2010) Infect Immun 78: 1593-600 - Detailed in vivo analysis of the role of Helicobacter pylori Fur in colonization and disease.
Miles S, Piazuelo MB, Semino-Mora C, Washington MK, Dubois A, Peek RM, Correa P, Merrell DS
(2010) Infect Immun 78: 3073-82 - High dietary salt intake exacerbates Helicobacter pylori-induced gastric carcinogenesis.
Gaddy JA, Radin JN, Loh JT, Zhang F, Washington MK, Peek RM, Algood HM, Cover TL
(2013) Infect Immun 81: 2258-67 - Helicobacter pylori adaptation in vivo in response to a high-salt diet.
Loh JT, Gaddy JA, Algood HM, Gaudieri S, Mallal S, Cover TL
(2015) Infect Immun 83: 4871-83 - Dietary Composition Influences Incidence of Helicobacter pylori-Induced Iron Deficiency Anemia and Gastric Ulceration.
Beckett AC, Piazuelo MB, Noto JM, Peek RM, Washington MK, Algood HM, Cover TL
(2016) Infect Immun 84: 3338-3349 - Effect of Helicobacter pylori eradication on gastric carcinogenesis.
Romero-Gallo J, Harris EJ, Krishna U, Washington MK, Perez-Perez GI, Peek RM
(2008) Lab Invest 88: 328-36 - Helicobacter pylori strain-specific modulation of gastric mucosal cellular turnover: implications for carcinogenesis.
Peek RM
(2002) J Gastroenterol 37 Suppl 13: 10-6 - Developmental biology of the Psammomys obesus pancreas: cloning and expression of the Neurogenin-3 gene.
Vedtofte L, Bödvarsdóttir TB, Karlsen AE, Heller RS
(2007) J Histochem Cytochem 55: 97-104 - Neuroprotection by a novel NMDAR functional glycine site partial agonist, GLYX-13.
Stanton PK, Potter PE, Aguilar J, Decandia M, Moskal JR
(2009) Neuroreport 20: 1193-7
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